Next Gen Pop Gen: implementing a high-throughput approach to population genetics in boarfish (Capros aper)
The recently developed approach for microsatellite genotyping by sequencing (GBS) using individual combinatorial barcoding was further improved and used to assess the genetic population structure of boarfish (Capros aper) across the species’ range. Microsatellite loci were developed de novo and geno...
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Online Access: | https://doi.org/10.1098/rsos.160651 |
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ftzenodo:oai:zenodo.org:4265063 2024-09-15T18:25:22+00:00 Next Gen Pop Gen: implementing a high-throughput approach to population genetics in boarfish (Capros aper) Farrell ED Carlsson JEL Carlsson J 2016-12-01 https://doi.org/10.1098/rsos.160651 unknown Zenodo https://zenodo.org/communities/eu https://doi.org/10.1098/rsos.160651 oai:zenodo.org:4265063 info:eu-repo/semantics/openAccess Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode info:eu-repo/semantics/article 2016 ftzenodo https://doi.org/10.1098/rsos.160651 2024-07-27T00:53:41Z The recently developed approach for microsatellite genotyping by sequencing (GBS) using individual combinatorial barcoding was further improved and used to assess the genetic population structure of boarfish (Capros aper) across the species’ range. Microsatellite loci were developed de novo and genotyped by next-generation sequencing. Genetic analyses of the samples indicated that boarfish can be subdivided into at least seven biological units (populations) across the species’ range. Furthermore, the recent apparent increase in abundance in the northeast Atlantic is better explained by demographic changes within this area than by influx from southern or insular populations. This study clearly shows that the microsatellite GBS approach is a generic, cost-effective, rapid and powerful method suitable for full-scale population genetic studies—a crucial element for assessment, sustainable management and conservation of valuable biological resources. Article in Journal/Newspaper Northeast Atlantic Zenodo Royal Society Open Science 3 12 160651 |
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ftzenodo |
language |
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description |
The recently developed approach for microsatellite genotyping by sequencing (GBS) using individual combinatorial barcoding was further improved and used to assess the genetic population structure of boarfish (Capros aper) across the species’ range. Microsatellite loci were developed de novo and genotyped by next-generation sequencing. Genetic analyses of the samples indicated that boarfish can be subdivided into at least seven biological units (populations) across the species’ range. Furthermore, the recent apparent increase in abundance in the northeast Atlantic is better explained by demographic changes within this area than by influx from southern or insular populations. This study clearly shows that the microsatellite GBS approach is a generic, cost-effective, rapid and powerful method suitable for full-scale population genetic studies—a crucial element for assessment, sustainable management and conservation of valuable biological resources. |
format |
Article in Journal/Newspaper |
author |
Farrell ED Carlsson JEL Carlsson J |
spellingShingle |
Farrell ED Carlsson JEL Carlsson J Next Gen Pop Gen: implementing a high-throughput approach to population genetics in boarfish (Capros aper) |
author_facet |
Farrell ED Carlsson JEL Carlsson J |
author_sort |
Farrell ED |
title |
Next Gen Pop Gen: implementing a high-throughput approach to population genetics in boarfish (Capros aper) |
title_short |
Next Gen Pop Gen: implementing a high-throughput approach to population genetics in boarfish (Capros aper) |
title_full |
Next Gen Pop Gen: implementing a high-throughput approach to population genetics in boarfish (Capros aper) |
title_fullStr |
Next Gen Pop Gen: implementing a high-throughput approach to population genetics in boarfish (Capros aper) |
title_full_unstemmed |
Next Gen Pop Gen: implementing a high-throughput approach to population genetics in boarfish (Capros aper) |
title_sort |
next gen pop gen: implementing a high-throughput approach to population genetics in boarfish (capros aper) |
publisher |
Zenodo |
publishDate |
2016 |
url |
https://doi.org/10.1098/rsos.160651 |
genre |
Northeast Atlantic |
genre_facet |
Northeast Atlantic |
op_relation |
https://zenodo.org/communities/eu https://doi.org/10.1098/rsos.160651 oai:zenodo.org:4265063 |
op_rights |
info:eu-repo/semantics/openAccess Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode |
op_doi |
https://doi.org/10.1098/rsos.160651 |
container_title |
Royal Society Open Science |
container_volume |
3 |
container_issue |
12 |
container_start_page |
160651 |
_version_ |
1810465881087541248 |