Data for: Sedimentary ancient DNA and pollen reveal the composition of plant organic matter in Late Quaternary permafrost sediments of the Buor Khaya Peninsula (north-eastern Siberia)

Organic matter deposited in ancient, ice-rich permafrost sediments is vulnerable to climate change and may contribute to the future release of greenhouse gases; it is thus important to get a better characterization of the plant organic matter within such sediments. From a Late Quaternary permafrost...

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Main Authors: Zimmermann, Heike, Raschke, Elena, Epp, Laura S., Stoof-Leichsenring, Kathleen R., Schwamborn, Georg, Schirrmeister, Lutz, Overduin, Pier Paul, Herzschuh, Ulrike
Format: Other/Unknown Material
Language:unknown
Published: Zenodo 2020
Subjects:
Online Access:https://doi.org/10.5061/dryad.mgqnk98xk
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author Zimmermann, Heike
Raschke, Elena
Epp, Laura S.
Stoof-Leichsenring, Kathleen R.
Schwamborn, Georg
Schirrmeister, Lutz
Overduin, Pier Paul
Herzschuh, Ulrike
author_facet Zimmermann, Heike
Raschke, Elena
Epp, Laura S.
Stoof-Leichsenring, Kathleen R.
Schwamborn, Georg
Schirrmeister, Lutz
Overduin, Pier Paul
Herzschuh, Ulrike
author_sort Zimmermann, Heike
collection Zenodo
description Organic matter deposited in ancient, ice-rich permafrost sediments is vulnerable to climate change and may contribute to the future release of greenhouse gases; it is thus important to get a better characterization of the plant organic matter within such sediments. From a Late Quaternary permafrost sediment core from the Buor Khaya Peninsula, we analysed plant-derived sedimentary ancient DNA (sedaDNA) to identify the taxonomic composition of plant organic matter, and undertook palynological analysis to assess the environmental conditions during deposition. Using sedaDNA, we identified 154 taxa and from pollen and non-pollen palynomorphs we identified 83 taxa. In the deposits dated between 54 and 51 kyr BP, sedaDNA records a diverse low-centred polygon plant community including recurring aquatic pond vegetation while from the pollen record we infer terrestrial open-land vegetation with relatively dry environmental conditions at a regional scale. A fluctuating dominance of either terrestrial or swamp and aquatic taxa in both proxies allowed the local hydrological development of the polygon to be traced. In deposits dated between 11.4 and 9.7 kyr BP (13.4–11.1 cal kyr BP), sedaDNA shows a taxonomic turnover to moist shrub tundra and a lower taxonomic richness compared to the older samples. Pollen also records a shrub tundra community, mostly seen as changes in relative proportions of the most dominant taxa, while a decrease in taxonomic richness was less pronounced compared to sedaDNA. Our results show the advantages of using sedaDNA in combination with palynological analyses when macrofossils are rarely preserved. The high resolution of the sedaDNA record provides a detailed picture of the taxonomic composition of plant-derived organic matter throughout the core, and palynological analyses prove valuable by allowing for inferences of regional environmental conditions. Here, we provide the raw paired-end sequencing data received from Fasteris as gz-compressed fastq files (forward reads: ...
format Other/Unknown Material
genre Ice
permafrost
Tundra
Siberia
genre_facet Ice
permafrost
Tundra
Siberia
geographic Buor-Khaya
Khaya
geographic_facet Buor-Khaya
Khaya
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institution Open Polar
language unknown
long_lat ENVELOPE(127.803,127.803,72.287,72.287)
ENVELOPE(135.167,135.167,60.567,60.567)
op_collection_id ftzenodo
op_doi https://doi.org/10.5061/dryad.mgqnk98xk10.5194/bg-14-575-201710.1594/PANGAEA.870897
op_relation https://doi.org/10.5194/bg-14-575-2017
https://doi.org/10.1594/PANGAEA.870897
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https://doi.org/10.5061/dryad.mgqnk98xk
oai:zenodo.org:4072226
op_rights info:eu-repo/semantics/openAccess
Creative Commons Zero v1.0 Universal
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publishDate 2020
publisher Zenodo
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spelling ftzenodo:oai:zenodo.org:4072226 2025-01-16T22:22:21+00:00 Data for: Sedimentary ancient DNA and pollen reveal the composition of plant organic matter in Late Quaternary permafrost sediments of the Buor Khaya Peninsula (north-eastern Siberia) Zimmermann, Heike Raschke, Elena Epp, Laura S. Stoof-Leichsenring, Kathleen R. Schwamborn, Georg Schirrmeister, Lutz Overduin, Pier Paul Herzschuh, Ulrike 2020-09-23 https://doi.org/10.5061/dryad.mgqnk98xk unknown Zenodo https://doi.org/10.5194/bg-14-575-2017 https://doi.org/10.1594/PANGAEA.870897 https://zenodo.org/communities/dryad https://doi.org/10.5061/dryad.mgqnk98xk oai:zenodo.org:4072226 info:eu-repo/semantics/openAccess Creative Commons Zero v1.0 Universal https://creativecommons.org/publicdomain/zero/1.0/legalcode info:eu-repo/semantics/other 2020 ftzenodo https://doi.org/10.5061/dryad.mgqnk98xk10.5194/bg-14-575-201710.1594/PANGAEA.870897 2024-12-05T05:01:45Z Organic matter deposited in ancient, ice-rich permafrost sediments is vulnerable to climate change and may contribute to the future release of greenhouse gases; it is thus important to get a better characterization of the plant organic matter within such sediments. From a Late Quaternary permafrost sediment core from the Buor Khaya Peninsula, we analysed plant-derived sedimentary ancient DNA (sedaDNA) to identify the taxonomic composition of plant organic matter, and undertook palynological analysis to assess the environmental conditions during deposition. Using sedaDNA, we identified 154 taxa and from pollen and non-pollen palynomorphs we identified 83 taxa. In the deposits dated between 54 and 51 kyr BP, sedaDNA records a diverse low-centred polygon plant community including recurring aquatic pond vegetation while from the pollen record we infer terrestrial open-land vegetation with relatively dry environmental conditions at a regional scale. A fluctuating dominance of either terrestrial or swamp and aquatic taxa in both proxies allowed the local hydrological development of the polygon to be traced. In deposits dated between 11.4 and 9.7 kyr BP (13.4–11.1 cal kyr BP), sedaDNA shows a taxonomic turnover to moist shrub tundra and a lower taxonomic richness compared to the older samples. Pollen also records a shrub tundra community, mostly seen as changes in relative proportions of the most dominant taxa, while a decrease in taxonomic richness was less pronounced compared to sedaDNA. Our results show the advantages of using sedaDNA in combination with palynological analyses when macrofossils are rarely preserved. The high resolution of the sedaDNA record provides a detailed picture of the taxonomic composition of plant-derived organic matter throughout the core, and palynological analyses prove valuable by allowing for inferences of regional environmental conditions. Here, we provide the raw paired-end sequencing data received from Fasteris as gz-compressed fastq files (forward reads: ... Other/Unknown Material Ice permafrost Tundra Siberia Zenodo Buor-Khaya ENVELOPE(127.803,127.803,72.287,72.287) Khaya ENVELOPE(135.167,135.167,60.567,60.567)
spellingShingle Zimmermann, Heike
Raschke, Elena
Epp, Laura S.
Stoof-Leichsenring, Kathleen R.
Schwamborn, Georg
Schirrmeister, Lutz
Overduin, Pier Paul
Herzschuh, Ulrike
Data for: Sedimentary ancient DNA and pollen reveal the composition of plant organic matter in Late Quaternary permafrost sediments of the Buor Khaya Peninsula (north-eastern Siberia)
title Data for: Sedimentary ancient DNA and pollen reveal the composition of plant organic matter in Late Quaternary permafrost sediments of the Buor Khaya Peninsula (north-eastern Siberia)
title_full Data for: Sedimentary ancient DNA and pollen reveal the composition of plant organic matter in Late Quaternary permafrost sediments of the Buor Khaya Peninsula (north-eastern Siberia)
title_fullStr Data for: Sedimentary ancient DNA and pollen reveal the composition of plant organic matter in Late Quaternary permafrost sediments of the Buor Khaya Peninsula (north-eastern Siberia)
title_full_unstemmed Data for: Sedimentary ancient DNA and pollen reveal the composition of plant organic matter in Late Quaternary permafrost sediments of the Buor Khaya Peninsula (north-eastern Siberia)
title_short Data for: Sedimentary ancient DNA and pollen reveal the composition of plant organic matter in Late Quaternary permafrost sediments of the Buor Khaya Peninsula (north-eastern Siberia)
title_sort data for: sedimentary ancient dna and pollen reveal the composition of plant organic matter in late quaternary permafrost sediments of the buor khaya peninsula (north-eastern siberia)
url https://doi.org/10.5061/dryad.mgqnk98xk