High-throughput sequencing of fungal communities across the perennial ice block of Scărișoara Ice Cave

This survey presents the first high-throughput characterisation of fungal distribution based on ITS2 Illumina sequencing of uncultured microbiome from a 1500 years old perennial ice deposit in Scărișoara Ice Cave, Romania. Of the total of 1 751 957 ITS2 sequences, 64% corresponded to 182 fungal oper...

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Published in:Annals of Glaciology
Main Authors: Antonio Mondini, Johanna Donhauser, Corina Itcus, Constantin Marin, Aurel Persoiu, Paris Lavin, Beat Frey, Cristina Purcarea
Format: Article in Journal/Newspaper
Language:English
Published: Zenodo 2019
Subjects:
Online Access:https://doi.org/10.1017/aog.2019.6
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spelling ftzenodo:oai:zenodo.org:3407374 2024-09-15T18:03:23+00:00 High-throughput sequencing of fungal communities across the perennial ice block of Scărișoara Ice Cave Antonio Mondini Johanna Donhauser Corina Itcus Constantin Marin Aurel Persoiu Paris Lavin Beat Frey Cristina Purcarea 2019-05-07 https://doi.org/10.1017/aog.2019.6 eng eng Zenodo https://zenodo.org/communities/microarctic https://doi.org/10.1017/aog.2019.6 oai:zenodo.org:3407374 info:eu-repo/semantics/openAccess Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cave ice ice and climate ice core microbiology info:eu-repo/semantics/article 2019 ftzenodo https://doi.org/10.1017/aog.2019.6 2024-07-25T13:07:31Z This survey presents the first high-throughput characterisation of fungal distribution based on ITS2 Illumina sequencing of uncultured microbiome from a 1500 years old perennial ice deposit in Scărișoara Ice Cave, Romania. Of the total of 1 751 957 ITS2 sequences, 64% corresponded to 182 fungal operational taxonomic units, showing a low diversity, particularly in older ice strata, and a distinct temporal distribution pattern. Ascomycota was the major phylum in all ice samples, dominating the 400 and 1500 years old ice strata deposited during the cold Little Ice Age (LIA) and Dark Ages Cold Period, while Basidiomycota was mostly present in 900-years old ice formed during the Medieval Warm Period (MWP). Chytridiomycota and Mucoromycota phyla were present in recently formed and 400-years old ice, respectively. Among the 80 identified genera,Cryptococcus victoriae, commonly found in glacial habitats, was identified in all strata. A positive correlation between fungal distribution and ice conductivity, Ca, Na and Sr concentrations was observed across the ice block, with pH values trailing climate variations during LIA and MWP, respectively. Our record highlighted the presence of a complex climate and environmental-driven fungal community in perennial ice strata accumulated during the last 1500 years in Scărișoara Ice Cave. Article in Journal/Newspaper Cryptococcus victoriae ice core Zenodo Annals of Glaciology 59 77 134 146
institution Open Polar
collection Zenodo
op_collection_id ftzenodo
language English
topic cave ice
ice and climate
ice core
microbiology
spellingShingle cave ice
ice and climate
ice core
microbiology
Antonio Mondini
Johanna Donhauser
Corina Itcus
Constantin Marin
Aurel Persoiu
Paris Lavin
Beat Frey
Cristina Purcarea
High-throughput sequencing of fungal communities across the perennial ice block of Scărișoara Ice Cave
topic_facet cave ice
ice and climate
ice core
microbiology
description This survey presents the first high-throughput characterisation of fungal distribution based on ITS2 Illumina sequencing of uncultured microbiome from a 1500 years old perennial ice deposit in Scărișoara Ice Cave, Romania. Of the total of 1 751 957 ITS2 sequences, 64% corresponded to 182 fungal operational taxonomic units, showing a low diversity, particularly in older ice strata, and a distinct temporal distribution pattern. Ascomycota was the major phylum in all ice samples, dominating the 400 and 1500 years old ice strata deposited during the cold Little Ice Age (LIA) and Dark Ages Cold Period, while Basidiomycota was mostly present in 900-years old ice formed during the Medieval Warm Period (MWP). Chytridiomycota and Mucoromycota phyla were present in recently formed and 400-years old ice, respectively. Among the 80 identified genera,Cryptococcus victoriae, commonly found in glacial habitats, was identified in all strata. A positive correlation between fungal distribution and ice conductivity, Ca, Na and Sr concentrations was observed across the ice block, with pH values trailing climate variations during LIA and MWP, respectively. Our record highlighted the presence of a complex climate and environmental-driven fungal community in perennial ice strata accumulated during the last 1500 years in Scărișoara Ice Cave.
format Article in Journal/Newspaper
author Antonio Mondini
Johanna Donhauser
Corina Itcus
Constantin Marin
Aurel Persoiu
Paris Lavin
Beat Frey
Cristina Purcarea
author_facet Antonio Mondini
Johanna Donhauser
Corina Itcus
Constantin Marin
Aurel Persoiu
Paris Lavin
Beat Frey
Cristina Purcarea
author_sort Antonio Mondini
title High-throughput sequencing of fungal communities across the perennial ice block of Scărișoara Ice Cave
title_short High-throughput sequencing of fungal communities across the perennial ice block of Scărișoara Ice Cave
title_full High-throughput sequencing of fungal communities across the perennial ice block of Scărișoara Ice Cave
title_fullStr High-throughput sequencing of fungal communities across the perennial ice block of Scărișoara Ice Cave
title_full_unstemmed High-throughput sequencing of fungal communities across the perennial ice block of Scărișoara Ice Cave
title_sort high-throughput sequencing of fungal communities across the perennial ice block of scărișoara ice cave
publisher Zenodo
publishDate 2019
url https://doi.org/10.1017/aog.2019.6
genre Cryptococcus victoriae
ice core
genre_facet Cryptococcus victoriae
ice core
op_relation https://zenodo.org/communities/microarctic
https://doi.org/10.1017/aog.2019.6
oai:zenodo.org:3407374
op_rights info:eu-repo/semantics/openAccess
Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
op_doi https://doi.org/10.1017/aog.2019.6
container_title Annals of Glaciology
container_volume 59
container_issue 77
container_start_page 134
op_container_end_page 146
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