Supplement of manuscript DSRI2707 ( http://dx.doi.org/10.1016/j.dsr.2016.11.002 )

This folder contains analysis data from the study published as article: TITLE: Molecular diversity patterns among various phytoplankton size-fractions in West Greenland in late summer AUTHORS: Stephanie Elferink Stefan Neuhaus Sylke Wohlrab Kerstin Toebe Daniela Voß Marc Gottschling Nina Lundholm Be...

Full description

Bibliographic Details
Main Authors: Elferink, Stephanie, Neuhaus, Stefan, Wohlrab, Sylke, Toebe, Kerstin, Voß, Daniela, Gottschling, Marc, Lundholm, Nina, Krock, Bernd, Koch, Boris P., Zielinski, Oliver, Cembella, Allen, John, Uwe
Format: Other/Unknown Material
Language:unknown
Published: Zenodo 2017
Subjects:
454 Pyrosequencing
Aquatic communities
Arctic
Biodiversity
DNA-barcoding
Phytoplankton community
Pelagic environment
Arctic biodiversity
Greenland
Phytoplankton
Online Access:https://doi.org/10.5281/zenodo.242257
id ftzenodo:oai:zenodo.org:242257
record_format openpolar
spelling ftzenodo:oai:zenodo.org:242257 2024-09-15T17:52:17+00:00 Supplement of manuscript DSRI2707 ( http://dx.doi.org/10.1016/j.dsr.2016.11.002 ) Elferink, Stephanie Neuhaus, Stefan Wohlrab, Sylke Toebe, Kerstin Voß, Daniela Gottschling, Marc Lundholm, Nina Krock, Bernd Koch, Boris P. Zielinski, Oliver Cembella, Allen John, Uwe 2017-01-17 https://doi.org/10.5281/zenodo.242257 unknown Zenodo https://doi.org/10.5281/zenodo.735328 https://doi.org/10.5281/zenodo.242257 oai:zenodo.org:242257 info:eu-repo/semantics/openAccess Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode Deep Sea Research Part I: Oceanographic Research Papers, (2017-01-17) 454 Pyrosequencing Aquatic communities Arctic Biodiversity DNA-barcoding Phytoplankton community Pelagic environment info:eu-repo/semantics/other 2017 ftzenodo https://doi.org/10.5281/zenodo.24225710.5281/zenodo.735328 2024-07-27T06:00:40Z This folder contains analysis data from the study published as article: TITLE: Molecular diversity patterns among various phytoplankton size-fractions in West Greenland in late summer AUTHORS: Stephanie Elferink Stefan Neuhaus Sylke Wohlrab Kerstin Toebe Daniela Voß Marc Gottschling Nina Lundholm Bernd Krock Boris P. Koch Oliver Zielinski Allan Cembella Uwe John JOURNAL: Deep Sea Research Part I: Oceanographic Research Papers MS-ID: DSRI2707 List of Files: Description: Filename --- QIIME-ZIP archive from the QZIP-pipeline: Greenland_Iceland_Euk_28S_M_N_P_combined_R454_20150618_173010.zip (the QZIP addionally contains OTU table as biom, OTU sequences, pipeline log files, result statistics, configure files; to navigate in the QZIP use index.htm) OTU table from QZIP: Greenland_Iceland_Euk_28S_M_N_P_combined_OTU.tab (OTU representatives taxonomically annotated by QIIME internal UCLUST consensus classifier) Phyloassigner OTU annotations: Greenland_Iceland_28S_M_N_P_combined_Strameno_pa.annotation and Greenland_Iceland_28S_M_N_P_combined_Dino_pa.annotation (Additional annotation of Stramenopile and Dinoflagellate OTUs based on phylogenetic placement and LCA determination) Phyloassigner databases: Stramenopiles_LSU_SSU_concat_1777.phyloassignerdb/ and Dinoflagellates_LSU_SSU_concat_640.phyloassignerdb/ This README-file: README-DSRI2707.txt --- For further information on supplement data and related publications see Bioinformatics Group at AWI: http://www.awi.de/en/go/bioinformatics and links therein. Bremerhaven, 04/Jan/2017 Other/Unknown Material Arctic biodiversity Greenland Phytoplankton Zenodo
institution Open Polar
collection Zenodo
op_collection_id ftzenodo
language unknown
topic 454 Pyrosequencing
Aquatic communities
Arctic
Biodiversity
DNA-barcoding
Phytoplankton community
Pelagic environment
spellingShingle 454 Pyrosequencing
Aquatic communities
Arctic
Biodiversity
DNA-barcoding
Phytoplankton community
Pelagic environment
Elferink, Stephanie
Neuhaus, Stefan
Wohlrab, Sylke
Toebe, Kerstin
Voß, Daniela
Gottschling, Marc
Lundholm, Nina
Krock, Bernd
Koch, Boris P.
Zielinski, Oliver
Cembella, Allen
John, Uwe
Supplement of manuscript DSRI2707 ( http://dx.doi.org/10.1016/j.dsr.2016.11.002 )
topic_facet 454 Pyrosequencing
Aquatic communities
Arctic
Biodiversity
DNA-barcoding
Phytoplankton community
Pelagic environment
description This folder contains analysis data from the study published as article: TITLE: Molecular diversity patterns among various phytoplankton size-fractions in West Greenland in late summer AUTHORS: Stephanie Elferink Stefan Neuhaus Sylke Wohlrab Kerstin Toebe Daniela Voß Marc Gottschling Nina Lundholm Bernd Krock Boris P. Koch Oliver Zielinski Allan Cembella Uwe John JOURNAL: Deep Sea Research Part I: Oceanographic Research Papers MS-ID: DSRI2707 List of Files: Description: Filename --- QIIME-ZIP archive from the QZIP-pipeline: Greenland_Iceland_Euk_28S_M_N_P_combined_R454_20150618_173010.zip (the QZIP addionally contains OTU table as biom, OTU sequences, pipeline log files, result statistics, configure files; to navigate in the QZIP use index.htm) OTU table from QZIP: Greenland_Iceland_Euk_28S_M_N_P_combined_OTU.tab (OTU representatives taxonomically annotated by QIIME internal UCLUST consensus classifier) Phyloassigner OTU annotations: Greenland_Iceland_28S_M_N_P_combined_Strameno_pa.annotation and Greenland_Iceland_28S_M_N_P_combined_Dino_pa.annotation (Additional annotation of Stramenopile and Dinoflagellate OTUs based on phylogenetic placement and LCA determination) Phyloassigner databases: Stramenopiles_LSU_SSU_concat_1777.phyloassignerdb/ and Dinoflagellates_LSU_SSU_concat_640.phyloassignerdb/ This README-file: README-DSRI2707.txt --- For further information on supplement data and related publications see Bioinformatics Group at AWI: http://www.awi.de/en/go/bioinformatics and links therein. Bremerhaven, 04/Jan/2017
format Other/Unknown Material
author Elferink, Stephanie
Neuhaus, Stefan
Wohlrab, Sylke
Toebe, Kerstin
Voß, Daniela
Gottschling, Marc
Lundholm, Nina
Krock, Bernd
Koch, Boris P.
Zielinski, Oliver
Cembella, Allen
John, Uwe
author_facet Elferink, Stephanie
Neuhaus, Stefan
Wohlrab, Sylke
Toebe, Kerstin
Voß, Daniela
Gottschling, Marc
Lundholm, Nina
Krock, Bernd
Koch, Boris P.
Zielinski, Oliver
Cembella, Allen
John, Uwe
author_sort Elferink, Stephanie
title Supplement of manuscript DSRI2707 ( http://dx.doi.org/10.1016/j.dsr.2016.11.002 )
title_short Supplement of manuscript DSRI2707 ( http://dx.doi.org/10.1016/j.dsr.2016.11.002 )
title_full Supplement of manuscript DSRI2707 ( http://dx.doi.org/10.1016/j.dsr.2016.11.002 )
title_fullStr Supplement of manuscript DSRI2707 ( http://dx.doi.org/10.1016/j.dsr.2016.11.002 )
title_full_unstemmed Supplement of manuscript DSRI2707 ( http://dx.doi.org/10.1016/j.dsr.2016.11.002 )
title_sort supplement of manuscript dsri2707 ( http://dx.doi.org/10.1016/j.dsr.2016.11.002 )
publisher Zenodo
publishDate 2017
url https://doi.org/10.5281/zenodo.242257
genre Arctic biodiversity
Greenland
Phytoplankton
genre_facet Arctic biodiversity
Greenland
Phytoplankton
op_source Deep Sea Research Part I: Oceanographic Research Papers, (2017-01-17)
op_relation https://doi.org/10.5281/zenodo.735328
https://doi.org/10.5281/zenodo.242257
oai:zenodo.org:242257
op_rights info:eu-repo/semantics/openAccess
Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
op_doi https://doi.org/10.5281/zenodo.24225710.5281/zenodo.735328
_version_ 1810294352536141824

Similar Items