Figure 1 in External and internal microbiomes of Antarctic nematodes are distinct, but more similar to each other than the surrounding environment

Figure 1: Graphical abstract of methods used to construct external and internal microbiomes of nematodes and tardigrades. For internal microbiomes, microinvertebrates were washed, sequenced, and host sequences subtracted before being averaged for each of the 24 mat replicates and 3 host types. For e...

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Main Authors: Parr McQueen, J., Gattoni, K., Gendron, E.M.S., Schmidt, S.K., Sommers, P., Porazinska, D. L.
Format: Other/Unknown Material
Language:unknown
Published: Zenodo 2023
Subjects:
Online Access:https://doi.org/10.5281/zenodo.11644714
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spelling ftzenodo:oai:zenodo.org:11644714 2024-09-15T17:43:12+00:00 Figure 1 in External and internal microbiomes of Antarctic nematodes are distinct, but more similar to each other than the surrounding environment Parr McQueen, J. Gattoni, K. Gendron, E.M.S. Schmidt, S.K. Sommers, P. Porazinska, D. L. 2023-03-09 https://doi.org/10.5281/zenodo.11644714 unknown Zenodo https://doi.org/10.2478/jofnem-2023-0004 lsid:urn:lsid:plazi.org:pub:B911FFD5FFF8FFF9FFC6FF83B42E044A https://zenodo.org/record/11644712 https://zenodo.org/communities/biosyslit https://doi.org/10.5281/zenodo.11644713 https://doi.org/10.5281/zenodo.11644714 oai:zenodo.org:11644714 info:eu-repo/semantics/openAccess Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode Journal of Nematology, 55(1), 1-28, (2023-03-09) Biodiversity Taxonomy info:eu-repo/semantics/other 2023 ftzenodo https://doi.org/10.5281/zenodo.1164471410.2478/jofnem-2023-000410.5281/zenodo.11644713 2024-07-26T14:07:05Z Figure 1: Graphical abstract of methods used to construct external and internal microbiomes of nematodes and tardigrades. For internal microbiomes, microinvertebrates were washed, sequenced, and host sequences subtracted before being averaged for each of the 24 mat replicates and 3 host types. For external microbiomes, unwashed microinvertebrates were sequenced, host sequences subtracted, and averaged for each of the 24 mat replicates and host types. The internal ASV abundances were then subtracted from the corresponding ASVs of unwashed community of the same mat replicate and microinvertebrate type to create the final external microbiome. Published as part of Parr McQueen, J., Gattoni, K., Gendron, E.M.S., Schmidt, S.K., Sommers, P. & Porazinska, D. L., 2023, External and internal microbiomes of Antarctic nematodes are distinct, but more similar to each other than the surrounding environment, pp. 1-28 in Journal of Nematology 55 (1) on page 6, DOI:10.2478/jofnem-2023-0004, http://zenodo.org/record/11644712 Other/Unknown Material Antarc* Antarctic Zenodo
institution Open Polar
collection Zenodo
op_collection_id ftzenodo
language unknown
topic Biodiversity
Taxonomy
spellingShingle Biodiversity
Taxonomy
Parr McQueen, J.
Gattoni, K.
Gendron, E.M.S.
Schmidt, S.K.
Sommers, P.
Porazinska, D. L.
Figure 1 in External and internal microbiomes of Antarctic nematodes are distinct, but more similar to each other than the surrounding environment
topic_facet Biodiversity
Taxonomy
description Figure 1: Graphical abstract of methods used to construct external and internal microbiomes of nematodes and tardigrades. For internal microbiomes, microinvertebrates were washed, sequenced, and host sequences subtracted before being averaged for each of the 24 mat replicates and 3 host types. For external microbiomes, unwashed microinvertebrates were sequenced, host sequences subtracted, and averaged for each of the 24 mat replicates and host types. The internal ASV abundances were then subtracted from the corresponding ASVs of unwashed community of the same mat replicate and microinvertebrate type to create the final external microbiome. Published as part of Parr McQueen, J., Gattoni, K., Gendron, E.M.S., Schmidt, S.K., Sommers, P. & Porazinska, D. L., 2023, External and internal microbiomes of Antarctic nematodes are distinct, but more similar to each other than the surrounding environment, pp. 1-28 in Journal of Nematology 55 (1) on page 6, DOI:10.2478/jofnem-2023-0004, http://zenodo.org/record/11644712
format Other/Unknown Material
author Parr McQueen, J.
Gattoni, K.
Gendron, E.M.S.
Schmidt, S.K.
Sommers, P.
Porazinska, D. L.
author_facet Parr McQueen, J.
Gattoni, K.
Gendron, E.M.S.
Schmidt, S.K.
Sommers, P.
Porazinska, D. L.
author_sort Parr McQueen, J.
title Figure 1 in External and internal microbiomes of Antarctic nematodes are distinct, but more similar to each other than the surrounding environment
title_short Figure 1 in External and internal microbiomes of Antarctic nematodes are distinct, but more similar to each other than the surrounding environment
title_full Figure 1 in External and internal microbiomes of Antarctic nematodes are distinct, but more similar to each other than the surrounding environment
title_fullStr Figure 1 in External and internal microbiomes of Antarctic nematodes are distinct, but more similar to each other than the surrounding environment
title_full_unstemmed Figure 1 in External and internal microbiomes of Antarctic nematodes are distinct, but more similar to each other than the surrounding environment
title_sort figure 1 in external and internal microbiomes of antarctic nematodes are distinct, but more similar to each other than the surrounding environment
publisher Zenodo
publishDate 2023
url https://doi.org/10.5281/zenodo.11644714
genre Antarc*
Antarctic
genre_facet Antarc*
Antarctic
op_source Journal of Nematology, 55(1), 1-28, (2023-03-09)
op_relation https://doi.org/10.2478/jofnem-2023-0004
lsid:urn:lsid:plazi.org:pub:B911FFD5FFF8FFF9FFC6FF83B42E044A
https://zenodo.org/record/11644712
https://zenodo.org/communities/biosyslit
https://doi.org/10.5281/zenodo.11644713
https://doi.org/10.5281/zenodo.11644714
oai:zenodo.org:11644714
op_rights info:eu-repo/semantics/openAccess
Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
op_doi https://doi.org/10.5281/zenodo.1164471410.2478/jofnem-2023-000410.5281/zenodo.11644713
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