Data from: "Little evidence of inbreeding depression for birth mass, survival and growth in Antarctic fur seal pups"

This data repository contains: "msats_growth_individuals.xlsx" - Microsatellite data (39 loci) of Antarctic fur seals "pup_growth_2017-2020.xlsx" - Birth weight and tagging weight data for pups collected in 2017-2020. "Rebeccas_Samples_Mendel_OriginalPedigree" - SNP arr...

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Main Authors: Paijmans, A.J., Berthelsen, A.L., Nagel, R., Christaller, F., Kröcker, N., Forcada, J., Hoffman, J.I.
Format: Other/Unknown Material
Language:English
Published: Zenodo 2024
Subjects:
Online Access:https://doi.org/10.5281/zenodo.10854333
id ftzenodo:oai:zenodo.org:10854333
record_format openpolar
spelling ftzenodo:oai:zenodo.org:10854333 2024-09-09T19:06:48+00:00 Data from: "Little evidence of inbreeding depression for birth mass, survival and growth in Antarctic fur seal pups" Paijmans, A.J. Berthelsen, A.L. Nagel, R. Christaller, F. Kröcker, N. Forcada, J. Hoffman, J.I. 2024-03-22 https://doi.org/10.5281/zenodo.10854333 eng eng Zenodo https://doi.org/10.1101/2024.01.12.575355 https://doi.org/10.5281/zenodo.10886970 https://doi.org/10.5281/zenodo.10854332 https://doi.org/10.5281/zenodo.10854333 oai:zenodo.org:10854333 info:eu-repo/semantics/openAccess Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode Antarctic fur seal Arctocephalus gazella microsatellites SNP array SPP 1158 SFB TRR 212/2 info:eu-repo/semantics/other 2024 ftzenodo https://doi.org/10.5281/zenodo.1085433310.1101/2024.01.12.57535510.5281/zenodo.1088697010.5281/zenodo.10854332 2024-07-26T12:12:21Z This data repository contains: "msats_growth_individuals.xlsx" - Microsatellite data (39 loci) of Antarctic fur seals "pup_growth_2017-2020.xlsx" - Birth weight and tagging weight data for pups collected in 2017-2020. "Rebeccas_Samples_Mendel_OriginalPedigree" - SNP array data (75k SNPs) in PLINK format for a subset of individuals "GrowthRM_BI1820_Day60.new.csv" - Repeated weight measures for a subset of individuals Manuscript abstract Inbreeding depression, the loss of offspring fitness due to consanguineous mating, is generally detrimental for individual performance and population viability. We therefore investigated inbreeding effects in a declining population of Antarctic fur seals ( Arctocephalus gazella ) at Bird Island, South Georgia. Here, localised warming has reduced the availability of the seal’s staple diet, Antarctic krill, leading to a temporal increase in the strength of selection against inbred offspring, which are increasingly failing to recruit into the adult breeding population. However, it remains unclear whether selection operates before or after nutritional independence at weaning. We therefore used microsatellite data from 885 pups and their mothers, and SNP array data from 98 mother-offspring pairs, to quantify the effects of individual and maternal inbreeding on three important neonatal fitness traits: birth mass, survival and growth. We did not find any clear or consistent effects of offspring or maternal inbreeding on any of these traits. This suggests that selection filters inbred individuals out of the population as juveniles during the time window between weaning and recruitment. Our study brings into focus a poorly understood life-history stage and emphasises the importance of understanding the ecology and threats facing juvenile pinnipeds. Funding This research was supported by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) priority programme “Antarctic Research with Comparative Investigations in Arctic Ice Areas” SPP 1158 (project number 424119118) and the ... Other/Unknown Material Antarc* Antarctic Antarctic Fur Seal Antarctic Fur Seals Antarctic Krill Arctic Arctocephalus gazella Bird Island Zenodo Arctic Antarctic Bird Island ENVELOPE(-38.060,-38.060,-54.004,-54.004)
institution Open Polar
collection Zenodo
op_collection_id ftzenodo
language English
topic Antarctic fur seal
Arctocephalus gazella
microsatellites
SNP array
SPP 1158
SFB TRR 212/2
spellingShingle Antarctic fur seal
Arctocephalus gazella
microsatellites
SNP array
SPP 1158
SFB TRR 212/2
Paijmans, A.J.
Berthelsen, A.L.
Nagel, R.
Christaller, F.
Kröcker, N.
Forcada, J.
Hoffman, J.I.
Data from: "Little evidence of inbreeding depression for birth mass, survival and growth in Antarctic fur seal pups"
topic_facet Antarctic fur seal
Arctocephalus gazella
microsatellites
SNP array
SPP 1158
SFB TRR 212/2
description This data repository contains: "msats_growth_individuals.xlsx" - Microsatellite data (39 loci) of Antarctic fur seals "pup_growth_2017-2020.xlsx" - Birth weight and tagging weight data for pups collected in 2017-2020. "Rebeccas_Samples_Mendel_OriginalPedigree" - SNP array data (75k SNPs) in PLINK format for a subset of individuals "GrowthRM_BI1820_Day60.new.csv" - Repeated weight measures for a subset of individuals Manuscript abstract Inbreeding depression, the loss of offspring fitness due to consanguineous mating, is generally detrimental for individual performance and population viability. We therefore investigated inbreeding effects in a declining population of Antarctic fur seals ( Arctocephalus gazella ) at Bird Island, South Georgia. Here, localised warming has reduced the availability of the seal’s staple diet, Antarctic krill, leading to a temporal increase in the strength of selection against inbred offspring, which are increasingly failing to recruit into the adult breeding population. However, it remains unclear whether selection operates before or after nutritional independence at weaning. We therefore used microsatellite data from 885 pups and their mothers, and SNP array data from 98 mother-offspring pairs, to quantify the effects of individual and maternal inbreeding on three important neonatal fitness traits: birth mass, survival and growth. We did not find any clear or consistent effects of offspring or maternal inbreeding on any of these traits. This suggests that selection filters inbred individuals out of the population as juveniles during the time window between weaning and recruitment. Our study brings into focus a poorly understood life-history stage and emphasises the importance of understanding the ecology and threats facing juvenile pinnipeds. Funding This research was supported by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) priority programme “Antarctic Research with Comparative Investigations in Arctic Ice Areas” SPP 1158 (project number 424119118) and the ...
format Other/Unknown Material
author Paijmans, A.J.
Berthelsen, A.L.
Nagel, R.
Christaller, F.
Kröcker, N.
Forcada, J.
Hoffman, J.I.
author_facet Paijmans, A.J.
Berthelsen, A.L.
Nagel, R.
Christaller, F.
Kröcker, N.
Forcada, J.
Hoffman, J.I.
author_sort Paijmans, A.J.
title Data from: "Little evidence of inbreeding depression for birth mass, survival and growth in Antarctic fur seal pups"
title_short Data from: "Little evidence of inbreeding depression for birth mass, survival and growth in Antarctic fur seal pups"
title_full Data from: "Little evidence of inbreeding depression for birth mass, survival and growth in Antarctic fur seal pups"
title_fullStr Data from: "Little evidence of inbreeding depression for birth mass, survival and growth in Antarctic fur seal pups"
title_full_unstemmed Data from: "Little evidence of inbreeding depression for birth mass, survival and growth in Antarctic fur seal pups"
title_sort data from: "little evidence of inbreeding depression for birth mass, survival and growth in antarctic fur seal pups"
publisher Zenodo
publishDate 2024
url https://doi.org/10.5281/zenodo.10854333
long_lat ENVELOPE(-38.060,-38.060,-54.004,-54.004)
geographic Arctic
Antarctic
Bird Island
geographic_facet Arctic
Antarctic
Bird Island
genre Antarc*
Antarctic
Antarctic Fur Seal
Antarctic Fur Seals
Antarctic Krill
Arctic
Arctocephalus gazella
Bird Island
genre_facet Antarc*
Antarctic
Antarctic Fur Seal
Antarctic Fur Seals
Antarctic Krill
Arctic
Arctocephalus gazella
Bird Island
op_relation https://doi.org/10.1101/2024.01.12.575355
https://doi.org/10.5281/zenodo.10886970
https://doi.org/10.5281/zenodo.10854332
https://doi.org/10.5281/zenodo.10854333
oai:zenodo.org:10854333
op_rights info:eu-repo/semantics/openAccess
Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
op_doi https://doi.org/10.5281/zenodo.1085433310.1101/2024.01.12.57535510.5281/zenodo.1088697010.5281/zenodo.10854332
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