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record_format openpolar
spelling ftzenodo:oai:zenodo.org:10376575 2024-09-09T20:03:59+00:00 The FORCIS database: A global census of planktonic Foraminifera from ocean waters Chaabane, Sonia de Garidel, Thibault Giraud, Xavier Schiebel, Ralf Beaugrand, Gregory Brummer, Geert-Jan Casajus, Nicolas Greco, Mattia Grigoratou, Maria Howa, Hélène Jonkers, Lukas Kucera, Michal Kuroyanagi, Azumi Meilland, Julie Monteiro, Fanny Mortyn, Graham Almogi-Labin Ahuva Asahi Hirofumi Avnaim-Katav Simona Bassinot Franck Davis Catherine V. Field David B. Hernandez-Almeida Ivan Herut Barak Hosie Graham Howard Will Jentzen Anna Johns David G. Keigwin Lloyd Kitchener John Kohfeld Karen E. Lessa Douglas V.O. Manno Clara Marchant Margarita Ofstad Siri Ortiz Joseph D. Post Alexandra Rigual-Hernandez Andres Rillo Marina C. Robinson Karen Sagawa Takuya Sierro Francisco Takahashi Kunio T. Torfstein Adi Venancio Igor Yamasaki Makoto Ziveri Patrizia 2023-12-14 https://doi.org/10.5281/zenodo.10376575 unknown Zenodo https://doi.org/10.5281/zenodo.7390791 https://doi.org/10.5281/zenodo.10376575 oai:zenodo.org:10376575 info:eu-repo/semantics/openAccess Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode Planktonic Foraminifera FORCIS database Biodiversity info:eu-repo/semantics/other 2023 ftzenodo https://doi.org/10.5281/zenodo.1037657510.5281/zenodo.7390791 2024-07-26T15:14:10Z The FORCIS (Foraminifera Response to Climatic Stress) databaseis a synthesis grouping datasets on living planktonic foraminifera. We assembled foraminiferal diversity and distribution data in the global oceans from 1910 until 2018, curating published and unpublished datasets. This database includes data collected using plankton tows, continuous plankton recorder, sediment traps and plankton pump from the global ocean. The FORCIS database version 01is composed of 5 files (“.csv” format). All data coming from different sampling devices were put into separate “.csv” files. Only the data of the CPR from the Southern Hemisphere have been separated from the Northern Hemisphere CPR data as the data structure is not the same (species counts resolved vs. binned total counts, respectively). Apart from the file of CPR data from the Northern Hemisphere that contains only metadata and binned total counts, all the remaining four files contain 4 blocks: Block 1: metadata (from column 1 to 71) Block 2: original counts (from column 72 to 274) Block 3: generated counts based on the validated taxonomy (from column 275 to 331). We added “_VT” to each species name to distinguish it from other taxonomy levels. E.g. “g_bulloides” became “g_bulloides_VT”. The number of species counted per subsample is also reported in the column “number_of_species_counted_VT” Block 4: generated counts based on the lumped taxonomy (from column 332 to 379). In this case, we added “_LT” to each species name. E.g. “n_dutertrei” became “n_dutertrei_VT”. We also calculated the number of species counted per subsample and reported it in the column “number_of_species_counted_LT” Foraminifera abundance data counts are reported in different categories in the blocks 1,2 and 3 and described in the table below: count_type unit Absolute ind/m3 Relative % Raw number of individuals Fluxes ind/m2/day Bin_Absolute ind/m3 Bin_Relative % Bin_Raw number of individuals Bin_Fluxes ind/m2/day For more details about the FORCIS database column description, please check the data ... Other/Unknown Material Planktonic foraminifera Zenodo
institution Open Polar
collection Zenodo
op_collection_id ftzenodo
language unknown
topic Planktonic Foraminifera
FORCIS database
Biodiversity
spellingShingle Planktonic Foraminifera
FORCIS database
Biodiversity
Chaabane, Sonia
de Garidel, Thibault
Giraud, Xavier
Schiebel, Ralf
Beaugrand, Gregory
Brummer, Geert-Jan
Casajus, Nicolas
Greco, Mattia
Grigoratou, Maria
Howa, Hélène
Jonkers, Lukas
Kucera, Michal
Kuroyanagi, Azumi
Meilland, Julie
Monteiro, Fanny
Mortyn, Graham
Almogi-Labin Ahuva
Asahi Hirofumi
Avnaim-Katav Simona
Bassinot Franck
Davis Catherine V.
Field David B.
Hernandez-Almeida Ivan
Herut Barak
Hosie Graham
Howard Will
Jentzen Anna
Johns David G.
Keigwin Lloyd
Kitchener John
Kohfeld Karen E.
Lessa Douglas V.O.
Manno Clara
Marchant Margarita
Ofstad Siri
Ortiz Joseph D.
Post Alexandra
Rigual-Hernandez Andres
Rillo Marina C.
Robinson Karen
Sagawa Takuya
Sierro Francisco
Takahashi Kunio T.
Torfstein Adi
Venancio Igor
Yamasaki Makoto
Ziveri Patrizia
The FORCIS database: A global census of planktonic Foraminifera from ocean waters
topic_facet Planktonic Foraminifera
FORCIS database
Biodiversity
description The FORCIS (Foraminifera Response to Climatic Stress) databaseis a synthesis grouping datasets on living planktonic foraminifera. We assembled foraminiferal diversity and distribution data in the global oceans from 1910 until 2018, curating published and unpublished datasets. This database includes data collected using plankton tows, continuous plankton recorder, sediment traps and plankton pump from the global ocean. The FORCIS database version 01is composed of 5 files (“.csv” format). All data coming from different sampling devices were put into separate “.csv” files. Only the data of the CPR from the Southern Hemisphere have been separated from the Northern Hemisphere CPR data as the data structure is not the same (species counts resolved vs. binned total counts, respectively). Apart from the file of CPR data from the Northern Hemisphere that contains only metadata and binned total counts, all the remaining four files contain 4 blocks: Block 1: metadata (from column 1 to 71) Block 2: original counts (from column 72 to 274) Block 3: generated counts based on the validated taxonomy (from column 275 to 331). We added “_VT” to each species name to distinguish it from other taxonomy levels. E.g. “g_bulloides” became “g_bulloides_VT”. The number of species counted per subsample is also reported in the column “number_of_species_counted_VT” Block 4: generated counts based on the lumped taxonomy (from column 332 to 379). In this case, we added “_LT” to each species name. E.g. “n_dutertrei” became “n_dutertrei_VT”. We also calculated the number of species counted per subsample and reported it in the column “number_of_species_counted_LT” Foraminifera abundance data counts are reported in different categories in the blocks 1,2 and 3 and described in the table below: count_type unit Absolute ind/m3 Relative % Raw number of individuals Fluxes ind/m2/day Bin_Absolute ind/m3 Bin_Relative % Bin_Raw number of individuals Bin_Fluxes ind/m2/day For more details about the FORCIS database column description, please check the data ...
format Other/Unknown Material
author Chaabane, Sonia
de Garidel, Thibault
Giraud, Xavier
Schiebel, Ralf
Beaugrand, Gregory
Brummer, Geert-Jan
Casajus, Nicolas
Greco, Mattia
Grigoratou, Maria
Howa, Hélène
Jonkers, Lukas
Kucera, Michal
Kuroyanagi, Azumi
Meilland, Julie
Monteiro, Fanny
Mortyn, Graham
Almogi-Labin Ahuva
Asahi Hirofumi
Avnaim-Katav Simona
Bassinot Franck
Davis Catherine V.
Field David B.
Hernandez-Almeida Ivan
Herut Barak
Hosie Graham
Howard Will
Jentzen Anna
Johns David G.
Keigwin Lloyd
Kitchener John
Kohfeld Karen E.
Lessa Douglas V.O.
Manno Clara
Marchant Margarita
Ofstad Siri
Ortiz Joseph D.
Post Alexandra
Rigual-Hernandez Andres
Rillo Marina C.
Robinson Karen
Sagawa Takuya
Sierro Francisco
Takahashi Kunio T.
Torfstein Adi
Venancio Igor
Yamasaki Makoto
Ziveri Patrizia
author_facet Chaabane, Sonia
de Garidel, Thibault
Giraud, Xavier
Schiebel, Ralf
Beaugrand, Gregory
Brummer, Geert-Jan
Casajus, Nicolas
Greco, Mattia
Grigoratou, Maria
Howa, Hélène
Jonkers, Lukas
Kucera, Michal
Kuroyanagi, Azumi
Meilland, Julie
Monteiro, Fanny
Mortyn, Graham
Almogi-Labin Ahuva
Asahi Hirofumi
Avnaim-Katav Simona
Bassinot Franck
Davis Catherine V.
Field David B.
Hernandez-Almeida Ivan
Herut Barak
Hosie Graham
Howard Will
Jentzen Anna
Johns David G.
Keigwin Lloyd
Kitchener John
Kohfeld Karen E.
Lessa Douglas V.O.
Manno Clara
Marchant Margarita
Ofstad Siri
Ortiz Joseph D.
Post Alexandra
Rigual-Hernandez Andres
Rillo Marina C.
Robinson Karen
Sagawa Takuya
Sierro Francisco
Takahashi Kunio T.
Torfstein Adi
Venancio Igor
Yamasaki Makoto
Ziveri Patrizia
author_sort Chaabane, Sonia
title The FORCIS database: A global census of planktonic Foraminifera from ocean waters
title_short The FORCIS database: A global census of planktonic Foraminifera from ocean waters
title_full The FORCIS database: A global census of planktonic Foraminifera from ocean waters
title_fullStr The FORCIS database: A global census of planktonic Foraminifera from ocean waters
title_full_unstemmed The FORCIS database: A global census of planktonic Foraminifera from ocean waters
title_sort forcis database: a global census of planktonic foraminifera from ocean waters
publisher Zenodo
publishDate 2023
url https://doi.org/10.5281/zenodo.10376575
genre Planktonic foraminifera
genre_facet Planktonic foraminifera
op_relation https://doi.org/10.5281/zenodo.7390791
https://doi.org/10.5281/zenodo.10376575
oai:zenodo.org:10376575
op_rights info:eu-repo/semantics/openAccess
Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
op_doi https://doi.org/10.5281/zenodo.1037657510.5281/zenodo.7390791
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