Massilia yuzhufengensis sp nov, isolated from an ice core
Global Change Research Program of China [2010CB951404]; Ministry of Science and Technology of the People's Republic of China [2009cb723901]; National Natural Science Foundation of China [40871045, 40930526, 40810019001]; MEL Young Scientist Visiting Fellowship [MELRS1022] A Gram-negative, rod-s...
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ftxiamenuniv:oai:dspace.xmu.edu.cn:2288/89070 2023-05-15T16:38:59+02:00 Massilia yuzhufengensis sp nov, isolated from an ice core Shen, Liang Liu, Yongqin Wang, Ninglian Yao, Tandong Jiao, Nianzhi Liu, Hongcan Zhou, Yuguang Xu, Baiqing Liu, Xiaobo 沈亮 焦念志 2013 http://dspace.xmu.edu.cn/handle/2288/89070 en_US eng SOC GENERAL MICROBIOLOGY INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2013,63:1285-1290 WOS:000319785700012 http://dspace.xmu.edu.cn/handle/2288/89070 http://dx.doi.org/10.1099/ijs.0.042101-0 EMENDED DESCRIPTION GEN. NOV DEOXYRIBONUCLEIC-ACID RENATURATION RATES DNA HYBRIDIZATION AIR SAMPLES NAXIBACTER BACTERIA PROPOSAL TIMONAE Article 2013 ftxiamenuniv 2020-07-21T11:43:19Z Global Change Research Program of China [2010CB951404]; Ministry of Science and Technology of the People's Republic of China [2009cb723901]; National Natural Science Foundation of China [40871045, 40930526, 40810019001]; MEL Young Scientist Visiting Fellowship [MELRS1022] A Gram-negative, rod-shaped, aerobic, motile bacterium, strain Y1243-1(T), was isolated from an ice core drilled from Yuzhufeng Glacier, Tibetan Plateau, China. Cells had polar flagella. The novel strain shared 94.7-97.6% 16S rRNA gene sequence similarity with the type strains of species of the genus Massilia. The novel isolate is thus classified in the genus Massilia. The major fatty acids of strain Y1243-1(T) were summed feature 3 (C-16:1 omega 7c and/or iso-C-15;0 2-OH) (43.98 %), C-16:0 (27.86%), C-10:0 3-OH (7.10%), C-18:0 (6.95%) and C-18:1 omega 7C (5.01 %). The predominant isoprenoid quinone was Q-8. The DNA G+C content of strain Y1243-1(T) was 65.7 mol% (T-m). The major polar lipids were phosphatidylethanolamine, phosphatidylglycerol and diphosphatidylglycerol. A number of phenotypic characteristics distinguished the novel isolate from the type strains of recognized Massilia species. Furthermore, in DNA DNA hybridization tests, strain Y1243-1(T) shared 45% relatedness with its closest phylogenetic relative, Massilia consociata CCUG 58010(T). From the genotypic and phenotypic data, it is evident that strain Y1243-1(T) represents a novel species of the genus Massilia, for which the name Massilia yuzhufengensis sp. nov. is proposed. The type strain is Y1243-1(T) (=KACC 16569(T)=CGMCC 1.12041(T)). Article in Journal/Newspaper ice core Xiamen University Institutional Repository |
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Xiamen University Institutional Repository |
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ftxiamenuniv |
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English |
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EMENDED DESCRIPTION GEN. NOV DEOXYRIBONUCLEIC-ACID RENATURATION RATES DNA HYBRIDIZATION AIR SAMPLES NAXIBACTER BACTERIA PROPOSAL TIMONAE |
spellingShingle |
EMENDED DESCRIPTION GEN. NOV DEOXYRIBONUCLEIC-ACID RENATURATION RATES DNA HYBRIDIZATION AIR SAMPLES NAXIBACTER BACTERIA PROPOSAL TIMONAE Shen, Liang Liu, Yongqin Wang, Ninglian Yao, Tandong Jiao, Nianzhi Liu, Hongcan Zhou, Yuguang Xu, Baiqing Liu, Xiaobo 沈亮 焦念志 Massilia yuzhufengensis sp nov, isolated from an ice core |
topic_facet |
EMENDED DESCRIPTION GEN. NOV DEOXYRIBONUCLEIC-ACID RENATURATION RATES DNA HYBRIDIZATION AIR SAMPLES NAXIBACTER BACTERIA PROPOSAL TIMONAE |
description |
Global Change Research Program of China [2010CB951404]; Ministry of Science and Technology of the People's Republic of China [2009cb723901]; National Natural Science Foundation of China [40871045, 40930526, 40810019001]; MEL Young Scientist Visiting Fellowship [MELRS1022] A Gram-negative, rod-shaped, aerobic, motile bacterium, strain Y1243-1(T), was isolated from an ice core drilled from Yuzhufeng Glacier, Tibetan Plateau, China. Cells had polar flagella. The novel strain shared 94.7-97.6% 16S rRNA gene sequence similarity with the type strains of species of the genus Massilia. The novel isolate is thus classified in the genus Massilia. The major fatty acids of strain Y1243-1(T) were summed feature 3 (C-16:1 omega 7c and/or iso-C-15;0 2-OH) (43.98 %), C-16:0 (27.86%), C-10:0 3-OH (7.10%), C-18:0 (6.95%) and C-18:1 omega 7C (5.01 %). The predominant isoprenoid quinone was Q-8. The DNA G+C content of strain Y1243-1(T) was 65.7 mol% (T-m). The major polar lipids were phosphatidylethanolamine, phosphatidylglycerol and diphosphatidylglycerol. A number of phenotypic characteristics distinguished the novel isolate from the type strains of recognized Massilia species. Furthermore, in DNA DNA hybridization tests, strain Y1243-1(T) shared 45% relatedness with its closest phylogenetic relative, Massilia consociata CCUG 58010(T). From the genotypic and phenotypic data, it is evident that strain Y1243-1(T) represents a novel species of the genus Massilia, for which the name Massilia yuzhufengensis sp. nov. is proposed. The type strain is Y1243-1(T) (=KACC 16569(T)=CGMCC 1.12041(T)). |
format |
Article in Journal/Newspaper |
author |
Shen, Liang Liu, Yongqin Wang, Ninglian Yao, Tandong Jiao, Nianzhi Liu, Hongcan Zhou, Yuguang Xu, Baiqing Liu, Xiaobo 沈亮 焦念志 |
author_facet |
Shen, Liang Liu, Yongqin Wang, Ninglian Yao, Tandong Jiao, Nianzhi Liu, Hongcan Zhou, Yuguang Xu, Baiqing Liu, Xiaobo 沈亮 焦念志 |
author_sort |
Shen, Liang |
title |
Massilia yuzhufengensis sp nov, isolated from an ice core |
title_short |
Massilia yuzhufengensis sp nov, isolated from an ice core |
title_full |
Massilia yuzhufengensis sp nov, isolated from an ice core |
title_fullStr |
Massilia yuzhufengensis sp nov, isolated from an ice core |
title_full_unstemmed |
Massilia yuzhufengensis sp nov, isolated from an ice core |
title_sort |
massilia yuzhufengensis sp nov, isolated from an ice core |
publisher |
SOC GENERAL MICROBIOLOGY |
publishDate |
2013 |
url |
http://dspace.xmu.edu.cn/handle/2288/89070 |
genre |
ice core |
genre_facet |
ice core |
op_source |
http://dx.doi.org/10.1099/ijs.0.042101-0 |
op_relation |
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2013,63:1285-1290 WOS:000319785700012 http://dspace.xmu.edu.cn/handle/2288/89070 |
_version_ |
1766029350275121152 |