Best practice data standards for discrete chemical oceanographic observations

© The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Jiang, L.-Q., Pierrot, D., Wanninkhof, R., Feely, R. A., Tilbrook, B., Alin, S., Barbero, L., Byrne, R. H., Carter, B. R., Dickson, A. G., Gattuso,...

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Published in:Frontiers in Marine Science
Main Authors: Jiang, Li-Qing, Pierrot, Denis, Wanninkhof, Rik, Feely, Richard A., Tilbrook, Bronte, Alin, Simone R., Barbero, Leticia, Byrne, Robert H., Carter, Brendan, Dickson, Andrew G., Gattuso, Jean-Pierre, Greeley, Dana, Hoppema, Mario, Humphreys, Matthew P., Karstensen, Johannes, Lange, Nico, Lauvset, Siv K., Lewis, Ernie R., Olsen, Are, Perez, Fiz F., Sabine, Christopher, Sharp, Jonathan D., Tanhua, Toste, Trull, Thomas W., Velo, Anton, Allegra, Andrew J., Barker, Paul M., Burger, Eugene, Cai, Wei-Jun, Chen, Chen-Tung A., Cross, Jessica N., Garcia, Hernan E., Hernandez-Ayon, Jose Martin, Hu, Xinping, Kozyr, Alex, Langdon, Chris, Lee, Kitack, Salisbury, Joseph E., Wang, Zhaohui Aleck, Xue, Liang
Format: Article in Journal/Newspaper
Language:unknown
Published: Frontiers Media 2022
Subjects:
Online Access:https://hdl.handle.net/1912/28964
id ftwhoas:oai:darchive.mblwhoilibrary.org:1912/28964
record_format openpolar
institution Open Polar
collection Woods Hole Scientific Community: WHOAS (Woods Hole Open Access Server)
op_collection_id ftwhoas
language unknown
topic Data standard for chemical oceanography
Discrete chemical oceanographic observations
Column header abbreviations
WOCE WHP exchange formats
Quality control flags
Content vs. concentration
CO2SYS
TEOS-10
spellingShingle Data standard for chemical oceanography
Discrete chemical oceanographic observations
Column header abbreviations
WOCE WHP exchange formats
Quality control flags
Content vs. concentration
CO2SYS
TEOS-10
Jiang, Li-Qing
Pierrot, Denis
Wanninkhof, Rik
Feely, Richard A.
Tilbrook, Bronte
Alin, Simone R.
Barbero, Leticia
Byrne, Robert H.
Carter, Brendan
Dickson, Andrew G.
Gattuso, Jean-Pierre
Greeley, Dana
Hoppema, Mario
Humphreys, Matthew P.
Karstensen, Johannes
Lange, Nico
Lauvset, Siv K.
Lewis, Ernie R.
Olsen, Are
Perez, Fiz F.
Sabine, Christopher
Sharp, Jonathan D.
Tanhua, Toste
Trull, Thomas W.
Velo, Anton
Allegra, Andrew J.
Barker, Paul M.
Burger, Eugene
Cai, Wei-Jun
Chen, Chen-Tung A.
Cross, Jessica N.
Garcia, Hernan E.
Hernandez-Ayon, Jose Martin
Hu, Xinping
Kozyr, Alex
Langdon, Chris
Lee, Kitack
Salisbury, Joseph E.
Wang, Zhaohui Aleck
Xue, Liang
Best practice data standards for discrete chemical oceanographic observations
topic_facet Data standard for chemical oceanography
Discrete chemical oceanographic observations
Column header abbreviations
WOCE WHP exchange formats
Quality control flags
Content vs. concentration
CO2SYS
TEOS-10
description © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Jiang, L.-Q., Pierrot, D., Wanninkhof, R., Feely, R. A., Tilbrook, B., Alin, S., Barbero, L., Byrne, R. H., Carter, B. R., Dickson, A. G., Gattuso, J.-P., Greeley, D., Hoppema, M., Humphreys, M. P., Karstensen, J., Lange, N., Lauvset, S. K., Lewis, E. R., Olsen, A., Pérez, F. F., Sabine, C., Sharp, J. D., Tanhua, T., Trull, T. W., Velo, A., Allegra, A. J., Barker, P., Burger, E., Cai, W-J., Chen, C-T. A., Cross, J., Garcia, H., Hernandez-Ayon J. M., Hu, X., Kozyr, A., Langdon, C., Lee., K, Salisbury, J., Wang, Z. A., & Xue, L. Best practice data standards for discrete chemical oceanographic observations. Frontiers in Marine Science, 8, (2022): 705638, https://doi.org/10.3389/fmars.2021.705638. Effective data management plays a key role in oceanographic research as cruise-based data, collected from different laboratories and expeditions, are commonly compiled to investigate regional to global oceanographic processes. Here we describe new and updated best practice data standards for discrete chemical oceanographic observations, specifically those dealing with column header abbreviations, quality control flags, missing value indicators, and standardized calculation of certain properties. These data standards have been developed with the goals of improving the current practices of the scientific community and promoting their international usage. These guidelines are intended to standardize data files for data sharing and submission into permanent archives. They will facilitate future quality control and synthesis efforts and lead to better data interpretation. In turn, this will promote research in ocean biogeochemistry, such as studies of carbon cycling and ocean acidification, on regional to global scales. These best practice standards are not mandatory. Agencies, institutes, universities, or research vessels can continue using different data standards if it ...
format Article in Journal/Newspaper
author Jiang, Li-Qing
Pierrot, Denis
Wanninkhof, Rik
Feely, Richard A.
Tilbrook, Bronte
Alin, Simone R.
Barbero, Leticia
Byrne, Robert H.
Carter, Brendan
Dickson, Andrew G.
Gattuso, Jean-Pierre
Greeley, Dana
Hoppema, Mario
Humphreys, Matthew P.
Karstensen, Johannes
Lange, Nico
Lauvset, Siv K.
Lewis, Ernie R.
Olsen, Are
Perez, Fiz F.
Sabine, Christopher
Sharp, Jonathan D.
Tanhua, Toste
Trull, Thomas W.
Velo, Anton
Allegra, Andrew J.
Barker, Paul M.
Burger, Eugene
Cai, Wei-Jun
Chen, Chen-Tung A.
Cross, Jessica N.
Garcia, Hernan E.
Hernandez-Ayon, Jose Martin
Hu, Xinping
Kozyr, Alex
Langdon, Chris
Lee, Kitack
Salisbury, Joseph E.
Wang, Zhaohui Aleck
Xue, Liang
author_facet Jiang, Li-Qing
Pierrot, Denis
Wanninkhof, Rik
Feely, Richard A.
Tilbrook, Bronte
Alin, Simone R.
Barbero, Leticia
Byrne, Robert H.
Carter, Brendan
Dickson, Andrew G.
Gattuso, Jean-Pierre
Greeley, Dana
Hoppema, Mario
Humphreys, Matthew P.
Karstensen, Johannes
Lange, Nico
Lauvset, Siv K.
Lewis, Ernie R.
Olsen, Are
Perez, Fiz F.
Sabine, Christopher
Sharp, Jonathan D.
Tanhua, Toste
Trull, Thomas W.
Velo, Anton
Allegra, Andrew J.
Barker, Paul M.
Burger, Eugene
Cai, Wei-Jun
Chen, Chen-Tung A.
Cross, Jessica N.
Garcia, Hernan E.
Hernandez-Ayon, Jose Martin
Hu, Xinping
Kozyr, Alex
Langdon, Chris
Lee, Kitack
Salisbury, Joseph E.
Wang, Zhaohui Aleck
Xue, Liang
author_sort Jiang, Li-Qing
title Best practice data standards for discrete chemical oceanographic observations
title_short Best practice data standards for discrete chemical oceanographic observations
title_full Best practice data standards for discrete chemical oceanographic observations
title_fullStr Best practice data standards for discrete chemical oceanographic observations
title_full_unstemmed Best practice data standards for discrete chemical oceanographic observations
title_sort best practice data standards for discrete chemical oceanographic observations
publisher Frontiers Media
publishDate 2022
url https://hdl.handle.net/1912/28964
long_lat ENVELOPE(167.987,167.987,69.936,69.936)
ENVELOPE(-62.167,-62.167,-74.500,-74.500)
ENVELOPE(-153.617,-153.617,-85.633,-85.633)
ENVELOPE(27.541,27.541,67.528,67.528)
geographic Ayon
Hernandez
Salisbury
Tanhua
geographic_facet Ayon
Hernandez
Salisbury
Tanhua
genre Ocean acidification
genre_facet Ocean acidification
op_source Jiang, L.-Q., Pierrot, D., Wanninkhof, R., Feely, R. A., Tilbrook, B., Alin, S., Barbero, L., Byrne, R. H., Carter, B. R., Dickson, A. G., Gattuso, J.-P., Greeley, D., Hoppema, M., Humphreys, M. P., Karstensen, J., Lange, N., Lauvset, S. K., Lewis, E. R., Olsen, A., Pérez, F. F., Sabine, C., Sharp, J. D., Tanhua, T., Trull, T. W., Velo, A., Allegra, A. J., Barker, P., Burger, E., Cai, W-J., Chen, C-T. A., Cross, J., Garcia, H., Hernandez-Ayon J. M., Hu, X., Kozyr, A., Langdon, C., Lee., K, Salisbury, J., Wang, Z. A., & Xue, L. (2022). Best practice data standards for discrete chemical oceanographic observations. Frontiers in Marine Science, 8, 705638.
doi:10.3389/fmars.2021.705638
op_relation https://doi.org/10.3389/fmars.2021.705638
Jiang, L.-Q., Pierrot, D., Wanninkhof, R., Feely, R. A., Tilbrook, B., Alin, S., Barbero, L., Byrne, R. H., Carter, B. R., Dickson, A. G., Gattuso, J.-P., Greeley, D., Hoppema, M., Humphreys, M. P., Karstensen, J., Lange, N., Lauvset, S. K., Lewis, E. R., Olsen, A., Pérez, F. F., Sabine, C., Sharp, J. D., Tanhua, T., Trull, T. W., Velo, A., Allegra, A. J., Barker, P., Burger, E., Cai, W-J., Chen, C-T. A., Cross, J., Garcia, H., Hernandez-Ayon J. M., Hu, X., Kozyr, A., Langdon, C., Lee., K, Salisbury, J., Wang, Z. A., & Xue, L. (2022). Best practice data standards for discrete chemical oceanographic observations. Frontiers in Marine Science, 8, 705638.
https://hdl.handle.net/1912/28964
doi:10.3389/fmars.2021.705638
op_rights Attribution 4.0 International
http://creativecommons.org/licenses/by/4.0/
op_rightsnorm CC-BY
op_doi https://doi.org/10.3389/fmars.2021.705638
container_title Frontiers in Marine Science
container_volume 8
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spelling ftwhoas:oai:darchive.mblwhoilibrary.org:1912/28964 2023-05-15T17:51:58+02:00 Best practice data standards for discrete chemical oceanographic observations Jiang, Li-Qing Pierrot, Denis Wanninkhof, Rik Feely, Richard A. Tilbrook, Bronte Alin, Simone R. Barbero, Leticia Byrne, Robert H. Carter, Brendan Dickson, Andrew G. Gattuso, Jean-Pierre Greeley, Dana Hoppema, Mario Humphreys, Matthew P. Karstensen, Johannes Lange, Nico Lauvset, Siv K. Lewis, Ernie R. Olsen, Are Perez, Fiz F. Sabine, Christopher Sharp, Jonathan D. Tanhua, Toste Trull, Thomas W. Velo, Anton Allegra, Andrew J. Barker, Paul M. Burger, Eugene Cai, Wei-Jun Chen, Chen-Tung A. Cross, Jessica N. Garcia, Hernan E. Hernandez-Ayon, Jose Martin Hu, Xinping Kozyr, Alex Langdon, Chris Lee, Kitack Salisbury, Joseph E. Wang, Zhaohui Aleck Xue, Liang 2022-01-21 https://hdl.handle.net/1912/28964 unknown Frontiers Media https://doi.org/10.3389/fmars.2021.705638 Jiang, L.-Q., Pierrot, D., Wanninkhof, R., Feely, R. A., Tilbrook, B., Alin, S., Barbero, L., Byrne, R. H., Carter, B. R., Dickson, A. G., Gattuso, J.-P., Greeley, D., Hoppema, M., Humphreys, M. P., Karstensen, J., Lange, N., Lauvset, S. K., Lewis, E. R., Olsen, A., Pérez, F. F., Sabine, C., Sharp, J. D., Tanhua, T., Trull, T. W., Velo, A., Allegra, A. J., Barker, P., Burger, E., Cai, W-J., Chen, C-T. A., Cross, J., Garcia, H., Hernandez-Ayon J. M., Hu, X., Kozyr, A., Langdon, C., Lee., K, Salisbury, J., Wang, Z. A., & Xue, L. (2022). Best practice data standards for discrete chemical oceanographic observations. Frontiers in Marine Science, 8, 705638. https://hdl.handle.net/1912/28964 doi:10.3389/fmars.2021.705638 Attribution 4.0 International http://creativecommons.org/licenses/by/4.0/ CC-BY Jiang, L.-Q., Pierrot, D., Wanninkhof, R., Feely, R. A., Tilbrook, B., Alin, S., Barbero, L., Byrne, R. H., Carter, B. R., Dickson, A. G., Gattuso, J.-P., Greeley, D., Hoppema, M., Humphreys, M. P., Karstensen, J., Lange, N., Lauvset, S. K., Lewis, E. R., Olsen, A., Pérez, F. F., Sabine, C., Sharp, J. D., Tanhua, T., Trull, T. W., Velo, A., Allegra, A. J., Barker, P., Burger, E., Cai, W-J., Chen, C-T. A., Cross, J., Garcia, H., Hernandez-Ayon J. M., Hu, X., Kozyr, A., Langdon, C., Lee., K, Salisbury, J., Wang, Z. A., & Xue, L. (2022). Best practice data standards for discrete chemical oceanographic observations. Frontiers in Marine Science, 8, 705638. doi:10.3389/fmars.2021.705638 Data standard for chemical oceanography Discrete chemical oceanographic observations Column header abbreviations WOCE WHP exchange formats Quality control flags Content vs. concentration CO2SYS TEOS-10 Article 2022 ftwhoas https://doi.org/10.3389/fmars.2021.705638 2022-10-29T22:57:31Z © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Jiang, L.-Q., Pierrot, D., Wanninkhof, R., Feely, R. A., Tilbrook, B., Alin, S., Barbero, L., Byrne, R. H., Carter, B. R., Dickson, A. G., Gattuso, J.-P., Greeley, D., Hoppema, M., Humphreys, M. P., Karstensen, J., Lange, N., Lauvset, S. K., Lewis, E. R., Olsen, A., Pérez, F. F., Sabine, C., Sharp, J. D., Tanhua, T., Trull, T. W., Velo, A., Allegra, A. J., Barker, P., Burger, E., Cai, W-J., Chen, C-T. A., Cross, J., Garcia, H., Hernandez-Ayon J. M., Hu, X., Kozyr, A., Langdon, C., Lee., K, Salisbury, J., Wang, Z. A., & Xue, L. Best practice data standards for discrete chemical oceanographic observations. Frontiers in Marine Science, 8, (2022): 705638, https://doi.org/10.3389/fmars.2021.705638. Effective data management plays a key role in oceanographic research as cruise-based data, collected from different laboratories and expeditions, are commonly compiled to investigate regional to global oceanographic processes. Here we describe new and updated best practice data standards for discrete chemical oceanographic observations, specifically those dealing with column header abbreviations, quality control flags, missing value indicators, and standardized calculation of certain properties. These data standards have been developed with the goals of improving the current practices of the scientific community and promoting their international usage. These guidelines are intended to standardize data files for data sharing and submission into permanent archives. They will facilitate future quality control and synthesis efforts and lead to better data interpretation. In turn, this will promote research in ocean biogeochemistry, such as studies of carbon cycling and ocean acidification, on regional to global scales. These best practice standards are not mandatory. Agencies, institutes, universities, or research vessels can continue using different data standards if it ... Article in Journal/Newspaper Ocean acidification Woods Hole Scientific Community: WHOAS (Woods Hole Open Access Server) Ayon ENVELOPE(167.987,167.987,69.936,69.936) Hernandez ENVELOPE(-62.167,-62.167,-74.500,-74.500) Salisbury ENVELOPE(-153.617,-153.617,-85.633,-85.633) Tanhua ENVELOPE(27.541,27.541,67.528,67.528) Frontiers in Marine Science 8