Globin engineering studies: optimizing the designs of circularly permuted myoglobin and single-chain hemoglobin

We are working to produce a stable and effective hemoglobin-based oxygen carrier (HBOC) for critical care. Mammalian myoglobins are good model systems for the protein engineering of human hemoglobin, and in the current work, our aim is to generate a circularly permuted myoglobin with increased therm...

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Main Author: Apperson, Jamie M. (Jamie Marie)
Format: Text
Language:English
Published: Western CEDAR 2013
Subjects:
Online Access:https://cedar.wwu.edu/wwuet/314
https://cedar.wwu.edu/cgi/viewcontent.cgi?article=1313&context=wwuet
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spelling ftwestwashington:oai:cedar.wwu.edu:wwuet-1313 2023-05-15T18:26:51+02:00 Globin engineering studies: optimizing the designs of circularly permuted myoglobin and single-chain hemoglobin Apperson, Jamie M. (Jamie Marie) 2013-01-01T08:00:00Z application/pdf https://cedar.wwu.edu/wwuet/314 https://cedar.wwu.edu/cgi/viewcontent.cgi?article=1313&context=wwuet English eng Western CEDAR https://cedar.wwu.edu/wwuet/314 https://cedar.wwu.edu/cgi/viewcontent.cgi?article=1313&context=wwuet Copying of this document in whole or in part is allowable only for scholarly purposes. It is understood, however, that any copying or publication of this thesis for commercial purposes, or for financial gain, shall not be allowed without the author's written permission. WWU Graduate School Collection Chemistry text 2013 ftwestwashington 2022-09-14T05:56:33Z We are working to produce a stable and effective hemoglobin-based oxygen carrier (HBOC) for critical care. Mammalian myoglobins are good model systems for the protein engineering of human hemoglobin, and in the current work, our aim is to generate a circularly permuted myoglobin with increased thermodynamic stability compared to previous permuteins characterized by our lab. Our initial permuted myoglobin, HGL16, includes a 16-residue Gly-Ser linker (SGGG)4 between the A and H helices in sperm whale myoglobin (swMb). Although HGL16 was shown to fold and function like wild-type swMb, its stability was reduced significantly. In the current work, computational design of the linker was employed, with the aim of increasing the stability of the permutein. The design modeled the linker as a helix, and includes novel interactions with the swMb framework. The resulting permutant, ML1, appears to be less stable than HGL16, but appears to refold properly from inclusion bodies based on the visible spectrum of the cyanomet isoform. In addition, we have generated a single-chain human hemoglobin (scHb) using shorter linkers between subunits. The scHb design includes a single glycine residue as the linker between the two α-globins and novel covalent connections between each α-globin and a permuted β-globin. To be utilized as the framework for a therapeutically useful HBOC, scHb must possess similar function and structure to authentic human hemoglobin (HbA). Functional studies indicate that scHb possesses highly similar ligand affinity to HbA in the R-state, but has an iron with increased reactivity in the T-state. Analysis by 1H NMR indicates that the heme binding pocket and the α1β1 interface in scHb have structures similar to those in recombinant human hemoglobin (rHb). Text Sperm whale Western Washington University: CEDAR (Contributing to Education through Digital Access to Research)
institution Open Polar
collection Western Washington University: CEDAR (Contributing to Education through Digital Access to Research)
op_collection_id ftwestwashington
language English
topic Chemistry
spellingShingle Chemistry
Apperson, Jamie M. (Jamie Marie)
Globin engineering studies: optimizing the designs of circularly permuted myoglobin and single-chain hemoglobin
topic_facet Chemistry
description We are working to produce a stable and effective hemoglobin-based oxygen carrier (HBOC) for critical care. Mammalian myoglobins are good model systems for the protein engineering of human hemoglobin, and in the current work, our aim is to generate a circularly permuted myoglobin with increased thermodynamic stability compared to previous permuteins characterized by our lab. Our initial permuted myoglobin, HGL16, includes a 16-residue Gly-Ser linker (SGGG)4 between the A and H helices in sperm whale myoglobin (swMb). Although HGL16 was shown to fold and function like wild-type swMb, its stability was reduced significantly. In the current work, computational design of the linker was employed, with the aim of increasing the stability of the permutein. The design modeled the linker as a helix, and includes novel interactions with the swMb framework. The resulting permutant, ML1, appears to be less stable than HGL16, but appears to refold properly from inclusion bodies based on the visible spectrum of the cyanomet isoform. In addition, we have generated a single-chain human hemoglobin (scHb) using shorter linkers between subunits. The scHb design includes a single glycine residue as the linker between the two α-globins and novel covalent connections between each α-globin and a permuted β-globin. To be utilized as the framework for a therapeutically useful HBOC, scHb must possess similar function and structure to authentic human hemoglobin (HbA). Functional studies indicate that scHb possesses highly similar ligand affinity to HbA in the R-state, but has an iron with increased reactivity in the T-state. Analysis by 1H NMR indicates that the heme binding pocket and the α1β1 interface in scHb have structures similar to those in recombinant human hemoglobin (rHb).
format Text
author Apperson, Jamie M. (Jamie Marie)
author_facet Apperson, Jamie M. (Jamie Marie)
author_sort Apperson, Jamie M. (Jamie Marie)
title Globin engineering studies: optimizing the designs of circularly permuted myoglobin and single-chain hemoglobin
title_short Globin engineering studies: optimizing the designs of circularly permuted myoglobin and single-chain hemoglobin
title_full Globin engineering studies: optimizing the designs of circularly permuted myoglobin and single-chain hemoglobin
title_fullStr Globin engineering studies: optimizing the designs of circularly permuted myoglobin and single-chain hemoglobin
title_full_unstemmed Globin engineering studies: optimizing the designs of circularly permuted myoglobin and single-chain hemoglobin
title_sort globin engineering studies: optimizing the designs of circularly permuted myoglobin and single-chain hemoglobin
publisher Western CEDAR
publishDate 2013
url https://cedar.wwu.edu/wwuet/314
https://cedar.wwu.edu/cgi/viewcontent.cgi?article=1313&context=wwuet
genre Sperm whale
genre_facet Sperm whale
op_source WWU Graduate School Collection
op_relation https://cedar.wwu.edu/wwuet/314
https://cedar.wwu.edu/cgi/viewcontent.cgi?article=1313&context=wwuet
op_rights Copying of this document in whole or in part is allowable only for scholarly purposes. It is understood, however, that any copying or publication of this thesis for commercial purposes, or for financial gain, shall not be allowed without the author's written permission.
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