Structural and functional properties of Antarctic fish cytoglobins-1: cold-reactivity in multi-ligand reactions

While the functions of the recently discovered cytoglobin, ubiquitously expressed in vertebrate tissues, remain uncertain, Antarctic fish provide unparalleled models to study novel protein traits that may arise from cold adaptation. We report here the spectral, ligand-binding and enzymatic propertie...

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Main Authors: Giordano, D., Pesce, A., Vermeylen, S., Abbruzzetti, S., Nardini, M., Marchesani, F., Berghmans, H., Seira, C., Bruno, S., Luque, F.J., di Prisco, G., Ascenzi, P., Dewilde, S., Bolognesi, M., Viappiani, C., Verde, C.
Format: Article in Journal/Newspaper
Language:English
Published: 2020
Subjects:
Online Access:https://www.vliz.be/imisdocs/publications/361554.pdf
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spelling ftvliz:oai:oma.vliz.be:338011 2023-05-15T13:53:33+02:00 Structural and functional properties of Antarctic fish cytoglobins-1: cold-reactivity in multi-ligand reactions Giordano, D. Pesce, A. Vermeylen, S. Abbruzzetti, S. Nardini, M. Marchesani, F. Berghmans, H. Seira, C. Bruno, S. Luque, F.J. di Prisco, G. Ascenzi, P. Dewilde, S. Bolognesi, M. Viappiani, C. Verde, C. 2020 application/pdf https://www.vliz.be/imisdocs/publications/361554.pdf en eng info:eu-repo/semantics/altIdentifier/wos/000607348200013 https://www.vliz.be/imisdocs/publications/361554.pdf info:eu-repo/semantics/openAccess %3Ci%3EComputational+and+Structural+Biotechnology+Journal+18%3C%2Fi%3E%3A+2132-2144.+%3Ca+href%3D%22https%3A%2F%2Fhdl.handle.net%2F10.1016%2Fj.csbj.2020.08.007%22+target%3D%22_blank%22%3Ehttps%3A%2F%2Fhdl.handle.net%2F10.1016%2Fj.csbj.2020.08.007%3C%2Fa%3E info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion 2020 ftvliz 2022-05-01T11:55:53Z While the functions of the recently discovered cytoglobin, ubiquitously expressed in vertebrate tissues, remain uncertain, Antarctic fish provide unparalleled models to study novel protein traits that may arise from cold adaptation. We report here the spectral, ligand-binding and enzymatic properties (peroxynitrite isomerization, nitrite-reductase activity) of cytoglobin-1 from two Antarctic fish, Chaenocephalus aceratus and Dissostichus mawsoni, and present the crystal structure of D. mawsoni cytoglobin-1. The Antarctic cytoglobins-1 display high O 2 affinity, scarcely compatible with an O 2 -supply role, a slow rate constant for nitrite-reductase activity, and do not catalyze peroxynitrite isomerization. Compared with mesophilic orthologues, the cold-adapted cytoglobins favor binding of exogenous ligands to the hexa -coordinated bis-histidyl species, a trait related to their higher rate constant for distal-His/heme-Fe dissociation relative to human cytoglobin. At the light of a remarkable 3D-structure conservation, the observed differences in ligand-binding kinetics may reflect Antarctic fish cytoglobin-1 specific features in the dynamics of the heme distal region and of protein matrix cavities, suggesting adaptation to functional requirements posed by the cold environment. Taken together, the biochemical and biophysical data presented suggest that in Antarctic fish, as in humans, cytoglobin-1 unlikely plays a role in O 2 transport, rather it may be involved in processes such as NO detoxification. Article in Journal/Newspaper Antarc* Antarctic Flanders Marine Institute (VLIZ): Open Marine Archive (OMA) Antarctic The Antarctic
institution Open Polar
collection Flanders Marine Institute (VLIZ): Open Marine Archive (OMA)
op_collection_id ftvliz
language English
description While the functions of the recently discovered cytoglobin, ubiquitously expressed in vertebrate tissues, remain uncertain, Antarctic fish provide unparalleled models to study novel protein traits that may arise from cold adaptation. We report here the spectral, ligand-binding and enzymatic properties (peroxynitrite isomerization, nitrite-reductase activity) of cytoglobin-1 from two Antarctic fish, Chaenocephalus aceratus and Dissostichus mawsoni, and present the crystal structure of D. mawsoni cytoglobin-1. The Antarctic cytoglobins-1 display high O 2 affinity, scarcely compatible with an O 2 -supply role, a slow rate constant for nitrite-reductase activity, and do not catalyze peroxynitrite isomerization. Compared with mesophilic orthologues, the cold-adapted cytoglobins favor binding of exogenous ligands to the hexa -coordinated bis-histidyl species, a trait related to their higher rate constant for distal-His/heme-Fe dissociation relative to human cytoglobin. At the light of a remarkable 3D-structure conservation, the observed differences in ligand-binding kinetics may reflect Antarctic fish cytoglobin-1 specific features in the dynamics of the heme distal region and of protein matrix cavities, suggesting adaptation to functional requirements posed by the cold environment. Taken together, the biochemical and biophysical data presented suggest that in Antarctic fish, as in humans, cytoglobin-1 unlikely plays a role in O 2 transport, rather it may be involved in processes such as NO detoxification.
format Article in Journal/Newspaper
author Giordano, D.
Pesce, A.
Vermeylen, S.
Abbruzzetti, S.
Nardini, M.
Marchesani, F.
Berghmans, H.
Seira, C.
Bruno, S.
Luque, F.J.
di Prisco, G.
Ascenzi, P.
Dewilde, S.
Bolognesi, M.
Viappiani, C.
Verde, C.
spellingShingle Giordano, D.
Pesce, A.
Vermeylen, S.
Abbruzzetti, S.
Nardini, M.
Marchesani, F.
Berghmans, H.
Seira, C.
Bruno, S.
Luque, F.J.
di Prisco, G.
Ascenzi, P.
Dewilde, S.
Bolognesi, M.
Viappiani, C.
Verde, C.
Structural and functional properties of Antarctic fish cytoglobins-1: cold-reactivity in multi-ligand reactions
author_facet Giordano, D.
Pesce, A.
Vermeylen, S.
Abbruzzetti, S.
Nardini, M.
Marchesani, F.
Berghmans, H.
Seira, C.
Bruno, S.
Luque, F.J.
di Prisco, G.
Ascenzi, P.
Dewilde, S.
Bolognesi, M.
Viappiani, C.
Verde, C.
author_sort Giordano, D.
title Structural and functional properties of Antarctic fish cytoglobins-1: cold-reactivity in multi-ligand reactions
title_short Structural and functional properties of Antarctic fish cytoglobins-1: cold-reactivity in multi-ligand reactions
title_full Structural and functional properties of Antarctic fish cytoglobins-1: cold-reactivity in multi-ligand reactions
title_fullStr Structural and functional properties of Antarctic fish cytoglobins-1: cold-reactivity in multi-ligand reactions
title_full_unstemmed Structural and functional properties of Antarctic fish cytoglobins-1: cold-reactivity in multi-ligand reactions
title_sort structural and functional properties of antarctic fish cytoglobins-1: cold-reactivity in multi-ligand reactions
publishDate 2020
url https://www.vliz.be/imisdocs/publications/361554.pdf
geographic Antarctic
The Antarctic
geographic_facet Antarctic
The Antarctic
genre Antarc*
Antarctic
genre_facet Antarc*
Antarctic
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op_relation info:eu-repo/semantics/altIdentifier/wos/000607348200013
https://www.vliz.be/imisdocs/publications/361554.pdf
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