MLVA-16 typing of 295 marine mammal Brucella isolates from different animal and geographic origins identifies 7 major groups within Brucella ceti and Brucella pinnipedialis

BackgroundSince 1994, Brucella strains have been isolated from a wide range of marine mammals. They are currently recognized as two new Brucella species, B. pinnipedialis for the pinniped isolates and B. ceti for the cetacean isolates in agreement with host preference and specific phenotypic and mol...

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Published in:BMC Microbiology
Main Authors: Maquart, M., Le Fleche, P., Foster, G., Tryland, M., Ramisse, F., Djonne, B., Al Dahouk, S., Jacques, I., Neubauer, H., Walravens, K., Godfroid, J., Cloeckaert, A., Vergnaud, G.
Format: Article in Journal/Newspaper
Language:English
Published: 2009
Subjects:
Online Access:https://www.vliz.be/imisdocs/publications/291289.pdf
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spelling ftvliz:oai:oma.vliz.be:257889 2023-05-15T15:59:54+02:00 MLVA-16 typing of 295 marine mammal Brucella isolates from different animal and geographic origins identifies 7 major groups within Brucella ceti and Brucella pinnipedialis Maquart, M. Le Fleche, P. Foster, G. Tryland, M. Ramisse, F. Djonne, B. Al Dahouk, S. Jacques, I. Neubauer, H. Walravens, K. Godfroid, J. Cloeckaert, A. Vergnaud, G. 2009 application/pdf https://www.vliz.be/imisdocs/publications/291289.pdf en eng info:eu-repo/semantics/altIdentifier/wos/000268669100002 info:eu-repo/semantics/altIdentifier/doi/doi.org/10.1186/1471-2180-9-145 https://www.vliz.be/imisdocs/publications/291289.pdf info:eu-repo/semantics/openAccess %3Ci%3EBMC+Microbiol.+9%3C%2Fi%3E%3A+11+pp.+%3Ca+href%3D%22https%3A%2F%2Fdx.doi.org%2F10.1186%2F1471-2180-9-145%22+target%3D%22_blank%22%3Ehttps%3A%2F%2Fdx.doi.org%2F10.1186%2F1471-2180-9-145%3C%2Fa%3E info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion 2009 ftvliz https://doi.org/10.1186/1471-2180-9-145 2022-05-01T10:40:54Z BackgroundSince 1994, Brucella strains have been isolated from a wide range of marine mammals. They are currently recognized as two new Brucella species, B. pinnipedialis for the pinniped isolates and B. ceti for the cetacean isolates in agreement with host preference and specific phenotypic and molecular markers. In order to investigate the genetic relationships within the marine mammal Brucella isolates and with reference to terrestrial mammal Brucella isolates, we applied in this study the Multiple Loci VNTR (Variable Number of Tandem Repeats) Analysis (MLVA) approach. A previously published assay comprising 16 loci (MLVA-16) that has been shown to be highly relevant and efficient for typing and clustering Brucella strains from animal and human origin was used.Results294 marine mammal Brucella strains collected in European waters from 173 animals and a human isolate from New Zealand presumably from marine origin were investigated by MLVA-16. Marine mammal Brucella isolates were shown to be different from the recognized terrestrial mammal Brucella species and biovars and corresponded to 3 major related groups, one specific of the B. ceti strains, one of the B. pinnipedialis strains and the last composed of the human isolate. In the B. ceti group, 3 subclusters were identified, distinguishing a cluster of dolphin, minke whale and porpoise isolates and two clusters mostly composed of dolphin isolates. These results were in accordance with published analyses using other phenotypic or molecular approaches, or different panels of VNTR loci. The B. pinnipedialis group could be similarly subdivided in 3 subclusters, one composed exclusively of isolates from hooded seals ( Cystophora cristata ) and the two others comprising other seal species isolates.ConclusionThe clustering analysis of a large collection of marine mammal Brucella isolates from European waters significantly strengthens the current view of the population structure of these two species, and their relative position with respect to the rest of the Brucella genus. MLVA-16 is confirmed as being a rapid, highly discriminatory and reproducible method to classify Brucella strains including the marine mammal isolates. The Brucella2009 MLVA-16 genotyping database available at http://mlva.u-psud.fr is providing a detailed coverage of all 9 currently recognized Brucella species. Article in Journal/Newspaper Cystophora cristata minke whale Flanders Marine Institute (VLIZ): Open Marine Archive (OMA) New Zealand BMC Microbiology 9 1 145
institution Open Polar
collection Flanders Marine Institute (VLIZ): Open Marine Archive (OMA)
op_collection_id ftvliz
language English
description BackgroundSince 1994, Brucella strains have been isolated from a wide range of marine mammals. They are currently recognized as two new Brucella species, B. pinnipedialis for the pinniped isolates and B. ceti for the cetacean isolates in agreement with host preference and specific phenotypic and molecular markers. In order to investigate the genetic relationships within the marine mammal Brucella isolates and with reference to terrestrial mammal Brucella isolates, we applied in this study the Multiple Loci VNTR (Variable Number of Tandem Repeats) Analysis (MLVA) approach. A previously published assay comprising 16 loci (MLVA-16) that has been shown to be highly relevant and efficient for typing and clustering Brucella strains from animal and human origin was used.Results294 marine mammal Brucella strains collected in European waters from 173 animals and a human isolate from New Zealand presumably from marine origin were investigated by MLVA-16. Marine mammal Brucella isolates were shown to be different from the recognized terrestrial mammal Brucella species and biovars and corresponded to 3 major related groups, one specific of the B. ceti strains, one of the B. pinnipedialis strains and the last composed of the human isolate. In the B. ceti group, 3 subclusters were identified, distinguishing a cluster of dolphin, minke whale and porpoise isolates and two clusters mostly composed of dolphin isolates. These results were in accordance with published analyses using other phenotypic or molecular approaches, or different panels of VNTR loci. The B. pinnipedialis group could be similarly subdivided in 3 subclusters, one composed exclusively of isolates from hooded seals ( Cystophora cristata ) and the two others comprising other seal species isolates.ConclusionThe clustering analysis of a large collection of marine mammal Brucella isolates from European waters significantly strengthens the current view of the population structure of these two species, and their relative position with respect to the rest of the Brucella genus. MLVA-16 is confirmed as being a rapid, highly discriminatory and reproducible method to classify Brucella strains including the marine mammal isolates. The Brucella2009 MLVA-16 genotyping database available at http://mlva.u-psud.fr is providing a detailed coverage of all 9 currently recognized Brucella species.
format Article in Journal/Newspaper
author Maquart, M.
Le Fleche, P.
Foster, G.
Tryland, M.
Ramisse, F.
Djonne, B.
Al Dahouk, S.
Jacques, I.
Neubauer, H.
Walravens, K.
Godfroid, J.
Cloeckaert, A.
Vergnaud, G.
spellingShingle Maquart, M.
Le Fleche, P.
Foster, G.
Tryland, M.
Ramisse, F.
Djonne, B.
Al Dahouk, S.
Jacques, I.
Neubauer, H.
Walravens, K.
Godfroid, J.
Cloeckaert, A.
Vergnaud, G.
MLVA-16 typing of 295 marine mammal Brucella isolates from different animal and geographic origins identifies 7 major groups within Brucella ceti and Brucella pinnipedialis
author_facet Maquart, M.
Le Fleche, P.
Foster, G.
Tryland, M.
Ramisse, F.
Djonne, B.
Al Dahouk, S.
Jacques, I.
Neubauer, H.
Walravens, K.
Godfroid, J.
Cloeckaert, A.
Vergnaud, G.
author_sort Maquart, M.
title MLVA-16 typing of 295 marine mammal Brucella isolates from different animal and geographic origins identifies 7 major groups within Brucella ceti and Brucella pinnipedialis
title_short MLVA-16 typing of 295 marine mammal Brucella isolates from different animal and geographic origins identifies 7 major groups within Brucella ceti and Brucella pinnipedialis
title_full MLVA-16 typing of 295 marine mammal Brucella isolates from different animal and geographic origins identifies 7 major groups within Brucella ceti and Brucella pinnipedialis
title_fullStr MLVA-16 typing of 295 marine mammal Brucella isolates from different animal and geographic origins identifies 7 major groups within Brucella ceti and Brucella pinnipedialis
title_full_unstemmed MLVA-16 typing of 295 marine mammal Brucella isolates from different animal and geographic origins identifies 7 major groups within Brucella ceti and Brucella pinnipedialis
title_sort mlva-16 typing of 295 marine mammal brucella isolates from different animal and geographic origins identifies 7 major groups within brucella ceti and brucella pinnipedialis
publishDate 2009
url https://www.vliz.be/imisdocs/publications/291289.pdf
geographic New Zealand
geographic_facet New Zealand
genre Cystophora cristata
minke whale
genre_facet Cystophora cristata
minke whale
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