Structural and Functional Characterization of Cyanoglobin: A Peripheral Membrane Hemoglobin in Nostoc commune UTEX 584 (Cyanobacteria)

Investigations of the nitrogen fixing (nif) genes in the cyanobacterium Nostoc commune UTEX 584 revealed a gene encoding a hemoprotein, named cyanoglobin. The cyanoglobin gene was isolated and subcloned into Escherichia coli previously. Cyanoglobin possesses a high oxygen affinity. The study present...

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Main Author: Thorsteinsson, Marc Victor III
Other Authors: Biochemistry, Potts, Malcolm, Ebel, Richard E., Bevan, David R., Hess, John L., Helm, Richard F.
Format: Doctoral or Postdoctoral Thesis
Language:unknown
Published: Virginia Tech 1997
Subjects:
Online Access:http://hdl.handle.net/10919/29827
http://scholar.lib.vt.edu/theses/available/etd-11597-135857/
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record_format openpolar
spelling ftvirginiatec:oai:vtechworks.lib.vt.edu:10919/29827 2024-05-19T07:49:05+00:00 Structural and Functional Characterization of Cyanoglobin: A Peripheral Membrane Hemoglobin in Nostoc commune UTEX 584 (Cyanobacteria) Thorsteinsson, Marc Victor III Biochemistry Potts, Malcolm Ebel, Richard E. Bevan, David R. Hess, John L. Helm, Richard F. 1997-12-03 application/pdf http://hdl.handle.net/10919/29827 http://scholar.lib.vt.edu/theses/available/etd-11597-135857/ unknown Virginia Tech etd.pdf ch1.pdf etd-11597-135857 http://hdl.handle.net/10919/29827 http://scholar.lib.vt.edu/theses/available/etd-11597-135857/ In Copyright http://rightsstatements.org/vocab/InC/1.0/ oxygen hemoglobin nitrogen fixation Dissertation 1997 ftvirginiatec 2024-05-01T00:31:23Z Investigations of the nitrogen fixing (nif) genes in the cyanobacterium Nostoc commune UTEX 584 revealed a gene encoding a hemoprotein, named cyanoglobin. The cyanoglobin gene was isolated and subcloned into Escherichia coli previously. Cyanoglobin possesses a high oxygen affinity. The study presented here investigated the functional role of cyanoglobin, and encompassed the determination of the kinetic basis for the high oxygen affinity of cyanoglobin through kinetic studies utilizing stopped-flow spectrophotometry and flash photolysis. In addition, studies of cyanoglobin, in the presence of a variety of ligands, employed as structural probes of the distal pocket architecture, are presented. These data are interpreted in terms of structural models of cyanoglobin produced by homology modelling and hemoglobins with known crystal structures. Cyanoglobin coordinated oxygen and a variety of ligands with high rates of association, which explained the high oxygen affinity of cyanoglobin. Cyanoglobin possessed high rates of autoxidation and hemin loss. The ligand binding behavior of cyanoglobin was more similar to leghemoglobin than to sperm whale myoglobin. The ligand binding behavior of cyanoglobin is explained in terms of a highly reactive, and solvent exposed, heme-iron. The 5' region of glbN interacted with NtcA, the global regulator of nitrogen metabolism in cyanobacteria, which may provide an indication of the nitrogen deprivation signal required for cyanoglobin expression in vivo. Finally, the isolation and N-terminal sequencing of a potential cyanoglobin homolog in Anabaena sp. strain PCC 7120 is presented. Collectively, the data obtained in this study may support the model of cyanoglobin function described by Hill, et al., that cyanoglobin sequesters oxygen, and presents it to, or is a part of, a terminal cytochrome oxidase complex in Nostoc commune UTEX 584 under microaerobic conditions, when nitrogen fixation, and thus ATP demand, is maximal. Ph. D. Doctoral or Postdoctoral Thesis Sperm whale VTechWorks (VirginiaTech)
institution Open Polar
collection VTechWorks (VirginiaTech)
op_collection_id ftvirginiatec
language unknown
topic oxygen
hemoglobin
nitrogen fixation
spellingShingle oxygen
hemoglobin
nitrogen fixation
Thorsteinsson, Marc Victor III
Structural and Functional Characterization of Cyanoglobin: A Peripheral Membrane Hemoglobin in Nostoc commune UTEX 584 (Cyanobacteria)
topic_facet oxygen
hemoglobin
nitrogen fixation
description Investigations of the nitrogen fixing (nif) genes in the cyanobacterium Nostoc commune UTEX 584 revealed a gene encoding a hemoprotein, named cyanoglobin. The cyanoglobin gene was isolated and subcloned into Escherichia coli previously. Cyanoglobin possesses a high oxygen affinity. The study presented here investigated the functional role of cyanoglobin, and encompassed the determination of the kinetic basis for the high oxygen affinity of cyanoglobin through kinetic studies utilizing stopped-flow spectrophotometry and flash photolysis. In addition, studies of cyanoglobin, in the presence of a variety of ligands, employed as structural probes of the distal pocket architecture, are presented. These data are interpreted in terms of structural models of cyanoglobin produced by homology modelling and hemoglobins with known crystal structures. Cyanoglobin coordinated oxygen and a variety of ligands with high rates of association, which explained the high oxygen affinity of cyanoglobin. Cyanoglobin possessed high rates of autoxidation and hemin loss. The ligand binding behavior of cyanoglobin was more similar to leghemoglobin than to sperm whale myoglobin. The ligand binding behavior of cyanoglobin is explained in terms of a highly reactive, and solvent exposed, heme-iron. The 5' region of glbN interacted with NtcA, the global regulator of nitrogen metabolism in cyanobacteria, which may provide an indication of the nitrogen deprivation signal required for cyanoglobin expression in vivo. Finally, the isolation and N-terminal sequencing of a potential cyanoglobin homolog in Anabaena sp. strain PCC 7120 is presented. Collectively, the data obtained in this study may support the model of cyanoglobin function described by Hill, et al., that cyanoglobin sequesters oxygen, and presents it to, or is a part of, a terminal cytochrome oxidase complex in Nostoc commune UTEX 584 under microaerobic conditions, when nitrogen fixation, and thus ATP demand, is maximal. Ph. D.
author2 Biochemistry
Potts, Malcolm
Ebel, Richard E.
Bevan, David R.
Hess, John L.
Helm, Richard F.
format Doctoral or Postdoctoral Thesis
author Thorsteinsson, Marc Victor III
author_facet Thorsteinsson, Marc Victor III
author_sort Thorsteinsson, Marc Victor III
title Structural and Functional Characterization of Cyanoglobin: A Peripheral Membrane Hemoglobin in Nostoc commune UTEX 584 (Cyanobacteria)
title_short Structural and Functional Characterization of Cyanoglobin: A Peripheral Membrane Hemoglobin in Nostoc commune UTEX 584 (Cyanobacteria)
title_full Structural and Functional Characterization of Cyanoglobin: A Peripheral Membrane Hemoglobin in Nostoc commune UTEX 584 (Cyanobacteria)
title_fullStr Structural and Functional Characterization of Cyanoglobin: A Peripheral Membrane Hemoglobin in Nostoc commune UTEX 584 (Cyanobacteria)
title_full_unstemmed Structural and Functional Characterization of Cyanoglobin: A Peripheral Membrane Hemoglobin in Nostoc commune UTEX 584 (Cyanobacteria)
title_sort structural and functional characterization of cyanoglobin: a peripheral membrane hemoglobin in nostoc commune utex 584 (cyanobacteria)
publisher Virginia Tech
publishDate 1997
url http://hdl.handle.net/10919/29827
http://scholar.lib.vt.edu/theses/available/etd-11597-135857/
genre Sperm whale
genre_facet Sperm whale
op_relation etd.pdf
ch1.pdf
etd-11597-135857
http://hdl.handle.net/10919/29827
http://scholar.lib.vt.edu/theses/available/etd-11597-135857/
op_rights In Copyright
http://rightsstatements.org/vocab/InC/1.0/
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