Multi-tissue Siberian sturgeon RNA sequencing data

International audience Siberian sturgeon, Acipenser baerii, is a commercially valuable fish for flesh and caviar production and a threatened species. We produced transcriptomic data for ten tissues with relevance to puberty, reproduction, early development, growth and food intake. The data includes...

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Bibliographic Details
Published in:Data in Brief
Main Authors: Klopp, Christophe, C., Cabau, Cédric, Lasalle, André, Di Landro, Santiago, Greif, Gonzalo, Vizziano-Cantonnet, Denise
Other Authors: Unité de Mathématiques et Informatique Appliquées de Toulouse (MIAT INRAE), Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Système d'Information des GENomes des Animaux d'Elevage (SIGENAE), Génétique Physiologie et Systèmes d'Elevage (GenPhySE ), Ecole Nationale Vétérinaire de Toulouse (ENVT), Institut National Polytechnique (Toulouse) (Toulouse INP), Université de Toulouse (UT)-Université de Toulouse (UT)-Institut National Polytechnique (Toulouse) (Toulouse INP), Université de Toulouse (UT)-Université de Toulouse (UT)-École nationale supérieure agronomique de Toulouse (ENSAT), Université de Toulouse (UT)-Université de Toulouse (UT)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Univ Republ Oriental Uruguay, Inst Biol, Fac Ciencias, Lab Fisiol Reprod & Ecol Peces, Institut Pasteur de Montevideo, Réseau International des Instituts Pasteur (RIIP), Comision Sectorial de Investigacion Cientifica (CSIC), Universidad de la Republica Oriental del Uruguay-Uruguay - C225-348, Agencia Nacional de Investigacion e Innovacion-Direccion Nacional de Recursos Acuaticos ANII-DINARA-Uruguay - FPA 9975, Agencia Nacional de Investigacion e Innovacion - FMV_1_2017_1_135908
Format: Article in Journal/Newspaper
Language:English
Published: HAL CCSD 2020
Subjects:
Siberian sturgeon
Transcriptomics
Anterior-kidney
Kidney
Stomach
Liver
Embryos
[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry
Molecular Biology/Genomics [q-bio.GN]
[INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM]
Acipenser baerii
Online Access:https://hal.inrae.fr/hal-03157670
https://doi.org/10.1016/j.dib.2020.105820
Description
Summary:International audience Siberian sturgeon, Acipenser baerii, is a commercially valuable fish for flesh and caviar production and a threatened species. We produced transcriptomic data for ten tissues with relevance to puberty, reproduction, early development, growth and food intake. The data includes RNA-Seq read sets of brain, pituitary, anterior-kidney, kidney, stomach, liver, heart, embryonic, pre-larval, and immature gonad sequences. Tissues were collected from sex differentiated fish (17 to 42 months of age, 66 to 85 cm) RNA was extracted and sequenced. Our purpose is to facilitate fundamental studies of sturgeon physiology to wild and aquaculture populations management. (C) 2020 The Author(s). Published by Elsevier Inc.

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