PorCC: a new high-accuracy click classifier to study harbour porpoises in the wild

Harbour porpoises (Phocoena phocoena) are difficult to observe at sea, even with good weather conditions, due to their small size and cryptic behaviour. However, they are highly vocal, producing narrow-band high-frequency (NBHF) echolocation clicks, which makes them well suited for passive acoustic...

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Main Authors: Cosentino, Melania, Guarato, Francesco, Tougaard, Jakob, Nairn, David, Jackson, Joseph C., Windmill, James F. C.
Format: Conference Object
Language:English
Published: 2019
Subjects:
Online Access:https://strathprints.strath.ac.uk/67255/
https://strathprints.strath.ac.uk/67255/1/Cosentino_etal_DMMS2019_PorCC_a_new_high_accuracy_click_classifier_to_study_harbour_porpoises.pdf
id ftustrathclyde:oai:strathprints.strath.ac.uk:67255
record_format openpolar
spelling ftustrathclyde:oai:strathprints.strath.ac.uk:67255 2024-04-28T08:23:01+00:00 PorCC: a new high-accuracy click classifier to study harbour porpoises in the wild Cosentino, Melania Guarato, Francesco Tougaard, Jakob Nairn, David Jackson, Joseph C. Windmill, James F. C. 2019-01-25 text https://strathprints.strath.ac.uk/67255/ https://strathprints.strath.ac.uk/67255/1/Cosentino_etal_DMMS2019_PorCC_a_new_high_accuracy_click_classifier_to_study_harbour_porpoises.pdf en eng https://strathprints.strath.ac.uk/67255/1/Cosentino_etal_DMMS2019_PorCC_a_new_high_accuracy_click_classifier_to_study_harbour_porpoises.pdf Cosentino, Melania <https://strathprints.strath.ac.uk/view/author/1099225.html> and Guarato, Francesco <https://strathprints.strath.ac.uk/view/author/822508.html> and Tougaard, Jakob and Nairn, David and Jackson, Joseph C. <https://strathprints.strath.ac.uk/view/author/675239.html> and Windmill, James F. C. <https://strathprints.strath.ac.uk/view/author/623701.html> (2019 <https://strathprints.strath.ac.uk/view/year/2019.html>) PorCC: a new high-accuracy click classifier to study harbour porpoises in the wild. In: The 15th Danish Marine Mammal Symposium <https://strathprints.strath.ac.uk/view/publications/The_15th_Danish_Marine_Mammal_Symposium.html>, 2019-01-23 - 2019-01-25. Electrical engineering. Electronics Nuclear engineering Conference or Workshop Item PeerReviewed 2019 ftustrathclyde 2024-04-10T01:10:09Z Harbour porpoises (Phocoena phocoena) are difficult to observe at sea, even with good weather conditions, due to their small size and cryptic behaviour. However, they are highly vocal, producing narrow-band high-frequency (NBHF) echolocation clicks, which makes them well suited for passive acoustic monitoring (PAM). Such PAM systems must be coupled with a classification algorithm to identify the likely porpoise signals among other transient signals. We present a new harbour porpoise click classifier (PorCC) for full-waveform signals, with an improved performance over current classifiers. PorCC was developed in MATLAB and uses the coefficients of two logistic regression models in a decision-making pathway to assign each signal to one of three categories: high-quality click (HQ), low-quality click (LQ), or high-frequency noise (N). The first model uses click duration and QRMS (RMS-bandwidth / centroid frequency) to separate HQ from N. The second model uses click duration, QRMS, ratio between peak and centroid frequency, peak cross-correlation coefficient (against a model click), centroid frequency, and -3dB bandwidth to separate LQ from N. PorCC achieved hit rates > 90% for HQ clicks while keeping false alarm levels < 1%. The performance of PorCC was compared to that of PAMGuard’s Porpoise Classifier module (with standard settings) and the receiver operating characteristics curve was generated for both classifiers. The precision for HQ (HQ clips classified as HQ / total clips classified as HQ) was 31.2% for PAMGuard and 96.1% for PorCC, and the detectability index (d’) was 2.2 for PAMGuard versus 4.1 for PorCC. Results of this study show PorCC is a rapid, highly accurate method to classify NBHF clicks, which could be applied for real time monitoring, as well as to study harbour porpoises, and potentially other NBHF species, throughout their distribution range from data collected using towed hydrophones or static recorders. Conference Object Harbour porpoise Phocoena phocoena University of Strathclyde Glasgow: Strathprints
institution Open Polar
collection University of Strathclyde Glasgow: Strathprints
op_collection_id ftustrathclyde
language English
topic Electrical engineering. Electronics Nuclear engineering
spellingShingle Electrical engineering. Electronics Nuclear engineering
Cosentino, Melania
Guarato, Francesco
Tougaard, Jakob
Nairn, David
Jackson, Joseph C.
Windmill, James F. C.
PorCC: a new high-accuracy click classifier to study harbour porpoises in the wild
topic_facet Electrical engineering. Electronics Nuclear engineering
description Harbour porpoises (Phocoena phocoena) are difficult to observe at sea, even with good weather conditions, due to their small size and cryptic behaviour. However, they are highly vocal, producing narrow-band high-frequency (NBHF) echolocation clicks, which makes them well suited for passive acoustic monitoring (PAM). Such PAM systems must be coupled with a classification algorithm to identify the likely porpoise signals among other transient signals. We present a new harbour porpoise click classifier (PorCC) for full-waveform signals, with an improved performance over current classifiers. PorCC was developed in MATLAB and uses the coefficients of two logistic regression models in a decision-making pathway to assign each signal to one of three categories: high-quality click (HQ), low-quality click (LQ), or high-frequency noise (N). The first model uses click duration and QRMS (RMS-bandwidth / centroid frequency) to separate HQ from N. The second model uses click duration, QRMS, ratio between peak and centroid frequency, peak cross-correlation coefficient (against a model click), centroid frequency, and -3dB bandwidth to separate LQ from N. PorCC achieved hit rates > 90% for HQ clicks while keeping false alarm levels < 1%. The performance of PorCC was compared to that of PAMGuard’s Porpoise Classifier module (with standard settings) and the receiver operating characteristics curve was generated for both classifiers. The precision for HQ (HQ clips classified as HQ / total clips classified as HQ) was 31.2% for PAMGuard and 96.1% for PorCC, and the detectability index (d’) was 2.2 for PAMGuard versus 4.1 for PorCC. Results of this study show PorCC is a rapid, highly accurate method to classify NBHF clicks, which could be applied for real time monitoring, as well as to study harbour porpoises, and potentially other NBHF species, throughout their distribution range from data collected using towed hydrophones or static recorders.
format Conference Object
author Cosentino, Melania
Guarato, Francesco
Tougaard, Jakob
Nairn, David
Jackson, Joseph C.
Windmill, James F. C.
author_facet Cosentino, Melania
Guarato, Francesco
Tougaard, Jakob
Nairn, David
Jackson, Joseph C.
Windmill, James F. C.
author_sort Cosentino, Melania
title PorCC: a new high-accuracy click classifier to study harbour porpoises in the wild
title_short PorCC: a new high-accuracy click classifier to study harbour porpoises in the wild
title_full PorCC: a new high-accuracy click classifier to study harbour porpoises in the wild
title_fullStr PorCC: a new high-accuracy click classifier to study harbour porpoises in the wild
title_full_unstemmed PorCC: a new high-accuracy click classifier to study harbour porpoises in the wild
title_sort porcc: a new high-accuracy click classifier to study harbour porpoises in the wild
publishDate 2019
url https://strathprints.strath.ac.uk/67255/
https://strathprints.strath.ac.uk/67255/1/Cosentino_etal_DMMS2019_PorCC_a_new_high_accuracy_click_classifier_to_study_harbour_porpoises.pdf
genre Harbour porpoise
Phocoena phocoena
genre_facet Harbour porpoise
Phocoena phocoena
op_relation https://strathprints.strath.ac.uk/67255/1/Cosentino_etal_DMMS2019_PorCC_a_new_high_accuracy_click_classifier_to_study_harbour_porpoises.pdf
Cosentino, Melania <https://strathprints.strath.ac.uk/view/author/1099225.html> and Guarato, Francesco <https://strathprints.strath.ac.uk/view/author/822508.html> and Tougaard, Jakob and Nairn, David and Jackson, Joseph C. <https://strathprints.strath.ac.uk/view/author/675239.html> and Windmill, James F. C. <https://strathprints.strath.ac.uk/view/author/623701.html> (2019 <https://strathprints.strath.ac.uk/view/year/2019.html>) PorCC: a new high-accuracy click classifier to study harbour porpoises in the wild. In: The 15th Danish Marine Mammal Symposium <https://strathprints.strath.ac.uk/view/publications/The_15th_Danish_Marine_Mammal_Symposium.html>, 2019-01-23 - 2019-01-25.
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