Transcript expression of inward rectifier potassium channels of Kir2 subfamily in Arctic marine and freshwater fish species

Inward rectifier K+ (Kir2) channels are critical for electrical excitability of cardiac myocytes. Here, we examine expression of Kir2 channels in the heart of three Gadiformes species, polar cod (Boreogadus saida) and navaga (Eleginus nawaga) of the Arctic Ocean and burbot (Lota lota) of the tempera...

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Published in:Journal of Comparative Physiology B
Main Authors: Hassinen, M., Korajoki, H., Abramochkin, D., Krivosheya, P., Vornanen, M.
Format: Article in Journal/Newspaper
Language:English
Published: Springer Verlag 2019
Subjects:
Online Access:http://elar.urfu.ru/handle/10995/90489
https://link.springer.com/content/pdf/10.1007/s00360-019-01241-9.pdf
http://www.scopus.com/inward/record.url?partnerID=8YFLogxK&scp=85074697998
https://doi.org/10.1007/s00360-019-01241-9
id fturalfuniv:oai:elar.urfu.ru:10995/90489
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spelling fturalfuniv:oai:elar.urfu.ru:10995/90489 2024-01-21T10:02:37+01:00 Transcript expression of inward rectifier potassium channels of Kir2 subfamily in Arctic marine and freshwater fish species Hassinen, M. Korajoki, H. Abramochkin, D. Krivosheya, P. Vornanen, M. 2019 application/pdf http://elar.urfu.ru/handle/10995/90489 https://link.springer.com/content/pdf/10.1007/s00360-019-01241-9.pdf http://www.scopus.com/inward/record.url?partnerID=8YFLogxK&scp=85074697998 https://doi.org/10.1007/s00360-019-01241-9 en eng Springer Verlag Transcript expression of inward rectifier potassium channels of Kir2 subfamily in Arctic marine and freshwater fish species / M. Hassinen, H. Korajoki, D. Abramochkin, P. Krivosheya, et al. . — DOI 10.1007/s00360-019-01241-9 // Journal of Comparative Physiology B: Biochemical, Systemic, and Environmental Physiology. — 2019. — Vol. 6. — Iss. 189. — P. 735-749. 0174-1578 https://link.springer.com/content/pdf/10.1007/s00360-019-01241-9.pdf 1 efb96a94-12f2-4951-a473-0f182ceff855 http://www.scopus.com/inward/record.url?partnerID=8YFLogxK&scp=85074697998 http://elar.urfu.ru/handle/10995/90489 doi:10.1007/s00360-019-01241-9 85074697998 000493668100001 info:eu-repo/semantics/openAccess cc-by Journal of Comparative Physiology B: Biochemical, Systemic, and Environmental Physiology FISH HEART INWARD RECTIFIER POTASSIUM CHANNELS KIR2 PARALOGUES RT-QPCR THERMAL ACCLIMATION FRESH WATER INWARDLY RECTIFYING POTASSIUM CHANNEL ANIMAL AQUATIC SPECIES CLASSIFICATION ECOSYSTEM FISH GENE EXPRESSION REGULATION GENETICS HEART ATRIUM HEART VENTRICLE METABOLISM MOLECULAR CLONING PHYSIOLOGY SPECIES DIFFERENCE TEMPERATURE ANIMALS AQUATIC ORGANISMS CLONING MOLECULAR FISHES HEART ATRIA HEART VENTRICLES POTASSIUM CHANNELS INWARDLY RECTIFYING SPECIES SPECIFICITY Article info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion 2019 fturalfuniv https://doi.org/10.1007/s00360-019-01241-9 2023-12-26T01:59:15Z Inward rectifier K+ (Kir2) channels are critical for electrical excitability of cardiac myocytes. Here, we examine expression of Kir2 channels in the heart of three Gadiformes species, polar cod (Boreogadus saida) and navaga (Eleginus nawaga) of the Arctic Ocean and burbot (Lota lota) of the temperate lakes to find out the role of Kir2 channels in cardiac adaptation to cold. Five boreal freshwater species: brown trout (Salmo trutta fario), arctic char (Salvelinus alpinus), roach (Rutilus rutilus), perch (Perca fluviatilis) and pike (Esox lucius), and zebrafish (Danio rerio), were included for comparison. Transcript expression of genes encoding Kir2.1a, − 2.1b, − 2.2a, − 2.2b and − 2.4 was studied from atrium and ventricle of thermally acclimated or acclimatized fish by quantitative PCR. Kir2 composition in the polar cod was more diverse than in other species in that all Kir2 isoforms were relatively highly expressed. Kir2 composition of navaga and burbot differed from that of the polar cod as well as from those of other species. The relative expression of Kir2.2 transcripts, especially Kir2.2b, was higher in both atrium and ventricle of navaga and burbot (56–89% from the total Kir2 pool) than in other species (0.1–11%). Thermal acclimation induced only small changes in cardiac Kir2 transcript expression in Gadiformes species. However, Kir2.2b transcripts were upregulated in cold-acclimated navaga and burbot hearts. All in all, the cardiac Kir2 composition seems to be dependent on both phylogenetic position and thermal preference of the fish. © 2019, The Author(s). Academy of Finland: 14955 Open access funding provided by University of Eastern Finland (UEF) including Kuopio University Hospital. The authors thank Anita Kervinen for her assistance with the fish. This work was supported by the Academy of Finland (grant number 14955). Article in Journal/Newspaper Arctic Arctic Arctic Ocean Boreogadus saida Burbot Esox lucius Lota lota polar cod Salvelinus alpinus lota Ural Federal University (URFU): ELAR Arctic Arctic Ocean Navaga ENVELOPE(162.106,162.106,59.229,59.229) Journal of Comparative Physiology B 189 6 735 749
institution Open Polar
collection Ural Federal University (URFU): ELAR
op_collection_id fturalfuniv
language English
topic FISH HEART
INWARD RECTIFIER POTASSIUM CHANNELS
KIR2 PARALOGUES
RT-QPCR
THERMAL ACCLIMATION
FRESH WATER
INWARDLY RECTIFYING POTASSIUM CHANNEL
ANIMAL
AQUATIC SPECIES
CLASSIFICATION
ECOSYSTEM
FISH
GENE EXPRESSION REGULATION
GENETICS
HEART ATRIUM
HEART VENTRICLE
METABOLISM
MOLECULAR CLONING
PHYSIOLOGY
SPECIES DIFFERENCE
TEMPERATURE
ANIMALS
AQUATIC ORGANISMS
CLONING
MOLECULAR
FISHES
HEART ATRIA
HEART VENTRICLES
POTASSIUM CHANNELS
INWARDLY RECTIFYING
SPECIES SPECIFICITY
spellingShingle FISH HEART
INWARD RECTIFIER POTASSIUM CHANNELS
KIR2 PARALOGUES
RT-QPCR
THERMAL ACCLIMATION
FRESH WATER
INWARDLY RECTIFYING POTASSIUM CHANNEL
ANIMAL
AQUATIC SPECIES
CLASSIFICATION
ECOSYSTEM
FISH
GENE EXPRESSION REGULATION
GENETICS
HEART ATRIUM
HEART VENTRICLE
METABOLISM
MOLECULAR CLONING
PHYSIOLOGY
SPECIES DIFFERENCE
TEMPERATURE
ANIMALS
AQUATIC ORGANISMS
CLONING
MOLECULAR
FISHES
HEART ATRIA
HEART VENTRICLES
POTASSIUM CHANNELS
INWARDLY RECTIFYING
SPECIES SPECIFICITY
Hassinen, M.
Korajoki, H.
Abramochkin, D.
Krivosheya, P.
Vornanen, M.
Transcript expression of inward rectifier potassium channels of Kir2 subfamily in Arctic marine and freshwater fish species
topic_facet FISH HEART
INWARD RECTIFIER POTASSIUM CHANNELS
KIR2 PARALOGUES
RT-QPCR
THERMAL ACCLIMATION
FRESH WATER
INWARDLY RECTIFYING POTASSIUM CHANNEL
ANIMAL
AQUATIC SPECIES
CLASSIFICATION
ECOSYSTEM
FISH
GENE EXPRESSION REGULATION
GENETICS
HEART ATRIUM
HEART VENTRICLE
METABOLISM
MOLECULAR CLONING
PHYSIOLOGY
SPECIES DIFFERENCE
TEMPERATURE
ANIMALS
AQUATIC ORGANISMS
CLONING
MOLECULAR
FISHES
HEART ATRIA
HEART VENTRICLES
POTASSIUM CHANNELS
INWARDLY RECTIFYING
SPECIES SPECIFICITY
description Inward rectifier K+ (Kir2) channels are critical for electrical excitability of cardiac myocytes. Here, we examine expression of Kir2 channels in the heart of three Gadiformes species, polar cod (Boreogadus saida) and navaga (Eleginus nawaga) of the Arctic Ocean and burbot (Lota lota) of the temperate lakes to find out the role of Kir2 channels in cardiac adaptation to cold. Five boreal freshwater species: brown trout (Salmo trutta fario), arctic char (Salvelinus alpinus), roach (Rutilus rutilus), perch (Perca fluviatilis) and pike (Esox lucius), and zebrafish (Danio rerio), were included for comparison. Transcript expression of genes encoding Kir2.1a, − 2.1b, − 2.2a, − 2.2b and − 2.4 was studied from atrium and ventricle of thermally acclimated or acclimatized fish by quantitative PCR. Kir2 composition in the polar cod was more diverse than in other species in that all Kir2 isoforms were relatively highly expressed. Kir2 composition of navaga and burbot differed from that of the polar cod as well as from those of other species. The relative expression of Kir2.2 transcripts, especially Kir2.2b, was higher in both atrium and ventricle of navaga and burbot (56–89% from the total Kir2 pool) than in other species (0.1–11%). Thermal acclimation induced only small changes in cardiac Kir2 transcript expression in Gadiformes species. However, Kir2.2b transcripts were upregulated in cold-acclimated navaga and burbot hearts. All in all, the cardiac Kir2 composition seems to be dependent on both phylogenetic position and thermal preference of the fish. © 2019, The Author(s). Academy of Finland: 14955 Open access funding provided by University of Eastern Finland (UEF) including Kuopio University Hospital. The authors thank Anita Kervinen for her assistance with the fish. This work was supported by the Academy of Finland (grant number 14955).
format Article in Journal/Newspaper
author Hassinen, M.
Korajoki, H.
Abramochkin, D.
Krivosheya, P.
Vornanen, M.
author_facet Hassinen, M.
Korajoki, H.
Abramochkin, D.
Krivosheya, P.
Vornanen, M.
author_sort Hassinen, M.
title Transcript expression of inward rectifier potassium channels of Kir2 subfamily in Arctic marine and freshwater fish species
title_short Transcript expression of inward rectifier potassium channels of Kir2 subfamily in Arctic marine and freshwater fish species
title_full Transcript expression of inward rectifier potassium channels of Kir2 subfamily in Arctic marine and freshwater fish species
title_fullStr Transcript expression of inward rectifier potassium channels of Kir2 subfamily in Arctic marine and freshwater fish species
title_full_unstemmed Transcript expression of inward rectifier potassium channels of Kir2 subfamily in Arctic marine and freshwater fish species
title_sort transcript expression of inward rectifier potassium channels of kir2 subfamily in arctic marine and freshwater fish species
publisher Springer Verlag
publishDate 2019
url http://elar.urfu.ru/handle/10995/90489
https://link.springer.com/content/pdf/10.1007/s00360-019-01241-9.pdf
http://www.scopus.com/inward/record.url?partnerID=8YFLogxK&scp=85074697998
https://doi.org/10.1007/s00360-019-01241-9
long_lat ENVELOPE(162.106,162.106,59.229,59.229)
geographic Arctic
Arctic Ocean
Navaga
geographic_facet Arctic
Arctic Ocean
Navaga
genre Arctic
Arctic
Arctic Ocean
Boreogadus saida
Burbot
Esox lucius
Lota lota
polar cod
Salvelinus alpinus
lota
genre_facet Arctic
Arctic
Arctic Ocean
Boreogadus saida
Burbot
Esox lucius
Lota lota
polar cod
Salvelinus alpinus
lota
op_source Journal of Comparative Physiology B: Biochemical, Systemic, and Environmental Physiology
op_relation Transcript expression of inward rectifier potassium channels of Kir2 subfamily in Arctic marine and freshwater fish species / M. Hassinen, H. Korajoki, D. Abramochkin, P. Krivosheya, et al. . — DOI 10.1007/s00360-019-01241-9 // Journal of Comparative Physiology B: Biochemical, Systemic, and Environmental Physiology. — 2019. — Vol. 6. — Iss. 189. — P. 735-749.
0174-1578
https://link.springer.com/content/pdf/10.1007/s00360-019-01241-9.pdf
1
efb96a94-12f2-4951-a473-0f182ceff855
http://www.scopus.com/inward/record.url?partnerID=8YFLogxK&scp=85074697998
http://elar.urfu.ru/handle/10995/90489
doi:10.1007/s00360-019-01241-9
85074697998
000493668100001
op_rights info:eu-repo/semantics/openAccess
cc-by
op_doi https://doi.org/10.1007/s00360-019-01241-9
container_title Journal of Comparative Physiology B
container_volume 189
container_issue 6
container_start_page 735
op_container_end_page 749
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