Community composition of aquatic fungi across the thawing Arctic

Thermokarst activity at permafrost sites releases considerable amounts of ancient carbon to the atmosphere. A large part of this carbon is released via thermokarst ponds, and fungi could be an important organismal group enabling its recycling. However, our knowledge about aquatic fungi in thermokars...

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Published in:Scientific Data
Main Authors: Kluge, Mariana, Wurzbacher, Christian, Wauthy, Maxime, Clemmensen, Karina Engelbrecht, Hawkes, Jeffrey A., Einarsdóttir, Karólina, Stenlid, Jan, Peura, Sari
Format: Article in Journal/Newspaper
Language:English
Published: Uppsala universitet, Institutionen för kemi - BMC 2021
Subjects:
Online Access:http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-453495
https://doi.org/10.1038/s41597-021-01005-7
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spelling ftuppsalauniv:oai:DiVA.org:uu-453495 2024-02-11T10:00:49+01:00 Community composition of aquatic fungi across the thawing Arctic Kluge, Mariana Wurzbacher, Christian Wauthy, Maxime Clemmensen, Karina Engelbrecht Hawkes, Jeffrey A. Einarsdóttir, Karólina Stenlid, Jan Peura, Sari 2021 application/pdf http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-453495 https://doi.org/10.1038/s41597-021-01005-7 eng eng Uppsala universitet, Institutionen för kemi - BMC Uppsala universitet, Limnologi Swedish Univ Agr Sci, Dept Forest Mycol & Plant Pathol, Sci Life Lab, Uppsala, Sweden. Tech Univ Munich, Dept Civil Geo & Environm Engn, Munich, Germany. Univ Quebec Chicoutimi, Dept Sci Fondamentales, Saguenay, PQ, Canada.;Univ Laval, Ctr Northern Studies CEN, Quebec City, PQ, Canada. Springer Nature Scientific Data, 2021, 8:1, orcid:0000-0002-9627-6428 orcid:0000-0003-0664-2242 orcid:0000-0001-9842-0158 http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-453495 doi:10.1038/s41597-021-01005-7 PMID 34413318 ISI:000686778200001 info:eu-repo/semantics/openAccess Environmental Sciences Miljövetenskap Article in journal info:eu-repo/semantics/article text 2021 ftuppsalauniv https://doi.org/10.1038/s41597-021-01005-7 2024-01-17T23:33:06Z Thermokarst activity at permafrost sites releases considerable amounts of ancient carbon to the atmosphere. A large part of this carbon is released via thermokarst ponds, and fungi could be an important organismal group enabling its recycling. However, our knowledge about aquatic fungi in thermokarstic systems is extremely limited. In this study, we collected samples from five permafrost sites distributed across circumpolar Arctic and representing different stages of permafrost integrity. Surface water samples were taken from the ponds and, additionally, for most of the ponds also the detritus and sediment samples were taken. All the samples were extracted for total DNA, which was then amplified for the fungal ITS2 region of the ribosomal genes. These amplicons were sequenced using PacBio technology. Water samples were also collected to analyze the chemical conditions in the ponds, including nutrient status and the quality and quantity of dissolved organic carbon. This dataset gives a unique overview of the impact of the thawing permafrost on fungal communities and their potential role on carbon recycling. Article in Journal/Newspaper Arctic permafrost Thermokarst Uppsala University: Publications (DiVA) Arctic Scientific Data 8 1
institution Open Polar
collection Uppsala University: Publications (DiVA)
op_collection_id ftuppsalauniv
language English
topic Environmental Sciences
Miljövetenskap
spellingShingle Environmental Sciences
Miljövetenskap
Kluge, Mariana
Wurzbacher, Christian
Wauthy, Maxime
Clemmensen, Karina Engelbrecht
Hawkes, Jeffrey A.
Einarsdóttir, Karólina
Stenlid, Jan
Peura, Sari
Community composition of aquatic fungi across the thawing Arctic
topic_facet Environmental Sciences
Miljövetenskap
description Thermokarst activity at permafrost sites releases considerable amounts of ancient carbon to the atmosphere. A large part of this carbon is released via thermokarst ponds, and fungi could be an important organismal group enabling its recycling. However, our knowledge about aquatic fungi in thermokarstic systems is extremely limited. In this study, we collected samples from five permafrost sites distributed across circumpolar Arctic and representing different stages of permafrost integrity. Surface water samples were taken from the ponds and, additionally, for most of the ponds also the detritus and sediment samples were taken. All the samples were extracted for total DNA, which was then amplified for the fungal ITS2 region of the ribosomal genes. These amplicons were sequenced using PacBio technology. Water samples were also collected to analyze the chemical conditions in the ponds, including nutrient status and the quality and quantity of dissolved organic carbon. This dataset gives a unique overview of the impact of the thawing permafrost on fungal communities and their potential role on carbon recycling.
format Article in Journal/Newspaper
author Kluge, Mariana
Wurzbacher, Christian
Wauthy, Maxime
Clemmensen, Karina Engelbrecht
Hawkes, Jeffrey A.
Einarsdóttir, Karólina
Stenlid, Jan
Peura, Sari
author_facet Kluge, Mariana
Wurzbacher, Christian
Wauthy, Maxime
Clemmensen, Karina Engelbrecht
Hawkes, Jeffrey A.
Einarsdóttir, Karólina
Stenlid, Jan
Peura, Sari
author_sort Kluge, Mariana
title Community composition of aquatic fungi across the thawing Arctic
title_short Community composition of aquatic fungi across the thawing Arctic
title_full Community composition of aquatic fungi across the thawing Arctic
title_fullStr Community composition of aquatic fungi across the thawing Arctic
title_full_unstemmed Community composition of aquatic fungi across the thawing Arctic
title_sort community composition of aquatic fungi across the thawing arctic
publisher Uppsala universitet, Institutionen för kemi - BMC
publishDate 2021
url http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-453495
https://doi.org/10.1038/s41597-021-01005-7
geographic Arctic
geographic_facet Arctic
genre Arctic
permafrost
Thermokarst
genre_facet Arctic
permafrost
Thermokarst
op_relation Scientific Data, 2021, 8:1,
orcid:0000-0002-9627-6428
orcid:0000-0003-0664-2242
orcid:0000-0001-9842-0158
http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-453495
doi:10.1038/s41597-021-01005-7
PMID 34413318
ISI:000686778200001
op_rights info:eu-repo/semantics/openAccess
op_doi https://doi.org/10.1038/s41597-021-01005-7
container_title Scientific Data
container_volume 8
container_issue 1
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