Genome-culture coevolution promotes rapid divergence of killer whale ecotypes

Analysing population genomic data from killer whale ecotypes, which we estimate have globally radiated within less than 250,000 years, we show that genetic structuring including the segregation of potentially functional alleles is associated with socially inherited ecological niche. Reconstruction o...

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Published in:Nature Communications
Main Authors: Foote, Andrew D., Vijay, Nagarjun, Avila-Arcos, Maria C., Baird, Robin W., Durban, John W., Fumagalli, Matteo, Gibbs, Richard A., Hanson, M. Bradley, Korneliussen, Thorfinn S., Martin, Michael D., Robertson, Kelly M., Sousa, Vitor C., Vieira, Filipe G., Vinar, Tomas, Wade, Paul, Worley, Kim C., Excoffier, Laurent, Morin, Phillip A., Gilbert, M. Thomas P., Wolf, Jochen B. W.
Format: Article in Journal/Newspaper
Language:English
Published: Uppsala universitet, Evolutionsbiologi 2016
Subjects:
Online Access:http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-298690
https://doi.org/10.1038/ncomms11693
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spelling ftuppsalauniv:oai:DiVA.org:uu-298690 2023-05-15T17:03:26+02:00 Genome-culture coevolution promotes rapid divergence of killer whale ecotypes Foote, Andrew D. Vijay, Nagarjun Avila-Arcos, Maria C. Baird, Robin W. Durban, John W. Fumagalli, Matteo Gibbs, Richard A. Hanson, M. Bradley Korneliussen, Thorfinn S. Martin, Michael D. Robertson, Kelly M. Sousa, Vitor C. Vieira, Filipe G. Vinar, Tomas Wade, Paul Worley, Kim C. Excoffier, Laurent Morin, Phillip A. Gilbert, M. Thomas P. Wolf, Jochen B. W. 2016 application/pdf http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-298690 https://doi.org/10.1038/ncomms11693 eng eng Uppsala universitet, Evolutionsbiologi Uppsala universitet, Science for Life Laboratory, SciLifeLab Univ Copenhagen, Nat Hist Museum Denmark, Ctr GeoGenet, Oster Volgade 5-7, DK-1350 Copenhagen K, Denmark.;Univ Bern, Inst Ecol & Evolut, Computat & Mol Populat Genet Lab, Baltzerstr 6, CH-3012 Bern, Switzerland. Univ Copenhagen, Nat Hist Museum Denmark, Ctr GeoGenet, Oster Volgade 5-7, DK-1350 Copenhagen K, Denmark.;Stanford Univ, Dept Genet, Stanford, CA 94305 USA. Cascadia Res, 4th Ave, Olympia, WA 98501 USA. NOAA, Marine Mammal & Turtle Div, Southwest Fisheries Sci Ctr, Natl Marine Fisheries Serv, 8901 La Jolla Shores Dr, La Jolla, CA 92037 USA. UCL, UCL Genet Inst, Dept Genet Evolut & Environm, London WC1E 6BT, England. Baylor Coll Med, Human Genome Sequencing Ctr, Dept Mol & Human Genet, One Baylor Plaza, Houston, TX 77030 USA. NOAA, NW Fisheries Sci Ctr, Natl Marine Fisheries Serv, 2725 Montlake Blvd East, Seattle, WA 98112 USA. Univ Copenhagen, Nat Hist Museum Denmark, Ctr GeoGenet, Oster Volgade 5-7, DK-1350 Copenhagen K, Denmark. Univ Bern, Inst Ecol & Evolut, Computat & Mol Populat Genet Lab, Baltzerstr 6, CH-3012 Bern, Switzerland. Comenius Univ, Fac Math Phys & Informat, Bratislava 84248, Slovakia. NOAA, Natl Marine Mammal Lab, Alaska Fisheries Sci Ctr, Natl Marine Fisheries Serv, 7600 Sand Point Way NE, Seattle, WA 98115 USA. Univ Copenhagen, Nat Hist Museum Denmark, Ctr GeoGenet, Oster Volgade 5-7, DK-1350 Copenhagen K, Denmark.;Curtin Univ, Dept Environm & Agr, Trace & Environm DNA Lab, Perth, WA 6102, Australia. Univ Munich, Dept Biol 2, Sect Evolutionary Biol, Grosshaderner Str 2, D-82152 Planegg Martinsried, Germany. Nature Communications, 2041-1723, 2016, 7, http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-298690 doi:10.1038/ncomms11693 PMID 27243207 ISI:000376823800001 info:eu-repo/semantics/openAccess Biological Sciences Biologiska vetenskaper Article in journal info:eu-repo/semantics/article text 2016 ftuppsalauniv https://doi.org/10.1038/ncomms11693 2023-02-23T21:58:05Z Analysing population genomic data from killer whale ecotypes, which we estimate have globally radiated within less than 250,000 years, we show that genetic structuring including the segregation of potentially functional alleles is associated with socially inherited ecological niche. Reconstruction of ancestral demographic history revealed bottlenecks during founder events, likely promoting ecological divergence and genetic drift resulting in a wide range of genome-wide differentiation between pairs of allopatric and sympatric ecotypes. Functional enrichment analyses provided evidence for regional genomic divergence associated with habitat, dietary preferences and post-zygotic reproductive isolation. Our findings are consistent with expansion of small founder groups into novel niches by an initial plastic behavioural response, perpetuated by social learning imposing an altered natural selection regime. The study constitutes an important step towards an understanding of the complex interaction between demographic history, culture, ecological adaptation and evolution at the genomic level. Article in Journal/Newspaper Killer Whale Killer whale Uppsala University: Publications (DiVA) Nature Communications 7 1
institution Open Polar
collection Uppsala University: Publications (DiVA)
op_collection_id ftuppsalauniv
language English
topic Biological Sciences
Biologiska vetenskaper
spellingShingle Biological Sciences
Biologiska vetenskaper
Foote, Andrew D.
Vijay, Nagarjun
Avila-Arcos, Maria C.
Baird, Robin W.
Durban, John W.
Fumagalli, Matteo
Gibbs, Richard A.
Hanson, M. Bradley
Korneliussen, Thorfinn S.
Martin, Michael D.
Robertson, Kelly M.
Sousa, Vitor C.
Vieira, Filipe G.
Vinar, Tomas
Wade, Paul
Worley, Kim C.
Excoffier, Laurent
Morin, Phillip A.
Gilbert, M. Thomas P.
Wolf, Jochen B. W.
Genome-culture coevolution promotes rapid divergence of killer whale ecotypes
topic_facet Biological Sciences
Biologiska vetenskaper
description Analysing population genomic data from killer whale ecotypes, which we estimate have globally radiated within less than 250,000 years, we show that genetic structuring including the segregation of potentially functional alleles is associated with socially inherited ecological niche. Reconstruction of ancestral demographic history revealed bottlenecks during founder events, likely promoting ecological divergence and genetic drift resulting in a wide range of genome-wide differentiation between pairs of allopatric and sympatric ecotypes. Functional enrichment analyses provided evidence for regional genomic divergence associated with habitat, dietary preferences and post-zygotic reproductive isolation. Our findings are consistent with expansion of small founder groups into novel niches by an initial plastic behavioural response, perpetuated by social learning imposing an altered natural selection regime. The study constitutes an important step towards an understanding of the complex interaction between demographic history, culture, ecological adaptation and evolution at the genomic level.
format Article in Journal/Newspaper
author Foote, Andrew D.
Vijay, Nagarjun
Avila-Arcos, Maria C.
Baird, Robin W.
Durban, John W.
Fumagalli, Matteo
Gibbs, Richard A.
Hanson, M. Bradley
Korneliussen, Thorfinn S.
Martin, Michael D.
Robertson, Kelly M.
Sousa, Vitor C.
Vieira, Filipe G.
Vinar, Tomas
Wade, Paul
Worley, Kim C.
Excoffier, Laurent
Morin, Phillip A.
Gilbert, M. Thomas P.
Wolf, Jochen B. W.
author_facet Foote, Andrew D.
Vijay, Nagarjun
Avila-Arcos, Maria C.
Baird, Robin W.
Durban, John W.
Fumagalli, Matteo
Gibbs, Richard A.
Hanson, M. Bradley
Korneliussen, Thorfinn S.
Martin, Michael D.
Robertson, Kelly M.
Sousa, Vitor C.
Vieira, Filipe G.
Vinar, Tomas
Wade, Paul
Worley, Kim C.
Excoffier, Laurent
Morin, Phillip A.
Gilbert, M. Thomas P.
Wolf, Jochen B. W.
author_sort Foote, Andrew D.
title Genome-culture coevolution promotes rapid divergence of killer whale ecotypes
title_short Genome-culture coevolution promotes rapid divergence of killer whale ecotypes
title_full Genome-culture coevolution promotes rapid divergence of killer whale ecotypes
title_fullStr Genome-culture coevolution promotes rapid divergence of killer whale ecotypes
title_full_unstemmed Genome-culture coevolution promotes rapid divergence of killer whale ecotypes
title_sort genome-culture coevolution promotes rapid divergence of killer whale ecotypes
publisher Uppsala universitet, Evolutionsbiologi
publishDate 2016
url http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-298690
https://doi.org/10.1038/ncomms11693
genre Killer Whale
Killer whale
genre_facet Killer Whale
Killer whale
op_relation Nature Communications, 2041-1723, 2016, 7,
http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-298690
doi:10.1038/ncomms11693
PMID 27243207
ISI:000376823800001
op_rights info:eu-repo/semantics/openAccess
op_doi https://doi.org/10.1038/ncomms11693
container_title Nature Communications
container_volume 7
container_issue 1
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