Global biogeography of SAR11 marine bacteria
The ubiquitous SAR11 bacterial clade is the most abundant type of organism in the world's oceans, but the reasons for its success are not fully elucidated. We analysed 128 surface marine metagenomes, including 37 new Antarctic metagenomes. The large size of the dataset enabled internal transcri...
Published in: | Molecular Systems Biology |
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2012
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ftunswworks:oai:unsworks.library.unsw.edu.au:1959.4/unsworks_49910 2024-06-02T07:57:59+00:00 Global biogeography of SAR11 marine bacteria Brown, MV Lauro, FM Demaere, MZ Muir, L Wilkins, D Thomas, T Riddle, M Fuhrman, J Andrews-Pfannkoch, C Hoffman, JM McQuaid, J Allen, A Rintoul, S Cavicchioli, R 2012 application/pdf http://hdl.handle.net/1959.4/unsworks_49910 https://unsworks.unsw.edu.au/bitstreams/a9040bcb-1c21-43fa-864a-e76dad29792c/download https://doi.org/10.1038/msb.2012.28 unknown Nature Publishing Group http://purl.org/au-research/grants/arc/DP1095504 http://hdl.handle.net/1959.4/unsworks_49910 https://unsworks.unsw.edu.au/bitstreams/a9040bcb-1c21-43fa-864a-e76dad29792c/download https://doi.org/10.1038/msb.2012.28 open access https://purl.org/coar/access_right/c_abf2 CC BY-NC-ND https://creativecommons.org/licenses/by-nc-nd/4.0/ free_to_read urn:ISSN:1744-4292 Molecular Systems Biology, 8, 1, 595 14 Life Below Water Alphaproteobacteria Antarctic Regions Climate Genome Bacterial Marine Biology Metagenome Models Biological Phylogeny Phylogeography Seawater Sequence Alignment Temperature anzsrc-for: 060102 Bioinformatics anzsrc-for: 0605 Microbiology anzsrc-for: 0601 Biochemistry and Cell Biology anzsrc-for: 0699 Other Biological Sciences journal article http://purl.org/coar/resource_type/c_6501 2012 ftunswworks https://doi.org/10.1038/msb.2012.28 2024-05-07T23:55:04Z The ubiquitous SAR11 bacterial clade is the most abundant type of organism in the world's oceans, but the reasons for its success are not fully elucidated. We analysed 128 surface marine metagenomes, including 37 new Antarctic metagenomes. The large size of the dataset enabled internal transcribed spacer (ITS) regions to be obtained from the Southern polar region, enabling the first global characterisation of the distribution of SAR11, from waters spanning temperatures -2ºC to 30ºC. Our data show a stable co-occurrence of phylotypes within both "tropical" (>20ºC) and "polar" ( Article in Journal/Newspaper Antarc* Antarctic UNSW Sydney (The University of New South Wales): UNSWorks Antarctic Molecular Systems Biology 8 1 595 |
institution |
Open Polar |
collection |
UNSW Sydney (The University of New South Wales): UNSWorks |
op_collection_id |
ftunswworks |
language |
unknown |
topic |
14 Life Below Water Alphaproteobacteria Antarctic Regions Climate Genome Bacterial Marine Biology Metagenome Models Biological Phylogeny Phylogeography Seawater Sequence Alignment Temperature anzsrc-for: 060102 Bioinformatics anzsrc-for: 0605 Microbiology anzsrc-for: 0601 Biochemistry and Cell Biology anzsrc-for: 0699 Other Biological Sciences |
spellingShingle |
14 Life Below Water Alphaproteobacteria Antarctic Regions Climate Genome Bacterial Marine Biology Metagenome Models Biological Phylogeny Phylogeography Seawater Sequence Alignment Temperature anzsrc-for: 060102 Bioinformatics anzsrc-for: 0605 Microbiology anzsrc-for: 0601 Biochemistry and Cell Biology anzsrc-for: 0699 Other Biological Sciences Brown, MV Lauro, FM Demaere, MZ Muir, L Wilkins, D Thomas, T Riddle, M Fuhrman, J Andrews-Pfannkoch, C Hoffman, JM McQuaid, J Allen, A Rintoul, S Cavicchioli, R Global biogeography of SAR11 marine bacteria |
topic_facet |
14 Life Below Water Alphaproteobacteria Antarctic Regions Climate Genome Bacterial Marine Biology Metagenome Models Biological Phylogeny Phylogeography Seawater Sequence Alignment Temperature anzsrc-for: 060102 Bioinformatics anzsrc-for: 0605 Microbiology anzsrc-for: 0601 Biochemistry and Cell Biology anzsrc-for: 0699 Other Biological Sciences |
description |
The ubiquitous SAR11 bacterial clade is the most abundant type of organism in the world's oceans, but the reasons for its success are not fully elucidated. We analysed 128 surface marine metagenomes, including 37 new Antarctic metagenomes. The large size of the dataset enabled internal transcribed spacer (ITS) regions to be obtained from the Southern polar region, enabling the first global characterisation of the distribution of SAR11, from waters spanning temperatures -2ºC to 30ºC. Our data show a stable co-occurrence of phylotypes within both "tropical" (>20ºC) and "polar" ( |
format |
Article in Journal/Newspaper |
author |
Brown, MV Lauro, FM Demaere, MZ Muir, L Wilkins, D Thomas, T Riddle, M Fuhrman, J Andrews-Pfannkoch, C Hoffman, JM McQuaid, J Allen, A Rintoul, S Cavicchioli, R |
author_facet |
Brown, MV Lauro, FM Demaere, MZ Muir, L Wilkins, D Thomas, T Riddle, M Fuhrman, J Andrews-Pfannkoch, C Hoffman, JM McQuaid, J Allen, A Rintoul, S Cavicchioli, R |
author_sort |
Brown, MV |
title |
Global biogeography of SAR11 marine bacteria |
title_short |
Global biogeography of SAR11 marine bacteria |
title_full |
Global biogeography of SAR11 marine bacteria |
title_fullStr |
Global biogeography of SAR11 marine bacteria |
title_full_unstemmed |
Global biogeography of SAR11 marine bacteria |
title_sort |
global biogeography of sar11 marine bacteria |
publisher |
Nature Publishing Group |
publishDate |
2012 |
url |
http://hdl.handle.net/1959.4/unsworks_49910 https://unsworks.unsw.edu.au/bitstreams/a9040bcb-1c21-43fa-864a-e76dad29792c/download https://doi.org/10.1038/msb.2012.28 |
geographic |
Antarctic |
geographic_facet |
Antarctic |
genre |
Antarc* Antarctic |
genre_facet |
Antarc* Antarctic |
op_source |
urn:ISSN:1744-4292 Molecular Systems Biology, 8, 1, 595 |
op_relation |
http://purl.org/au-research/grants/arc/DP1095504 http://hdl.handle.net/1959.4/unsworks_49910 https://unsworks.unsw.edu.au/bitstreams/a9040bcb-1c21-43fa-864a-e76dad29792c/download https://doi.org/10.1038/msb.2012.28 |
op_rights |
open access https://purl.org/coar/access_right/c_abf2 CC BY-NC-ND https://creativecommons.org/licenses/by-nc-nd/4.0/ free_to_read |
op_doi |
https://doi.org/10.1038/msb.2012.28 |
container_title |
Molecular Systems Biology |
container_volume |
8 |
container_issue |
1 |
container_start_page |
595 |
_version_ |
1800741230289616896 |