Global biogeography of SAR11 marine bacteria

The ubiquitous SAR11 bacterial clade is the most abundant type of organism in the world's oceans, but the reasons for its success are not fully elucidated. We analysed 128 surface marine metagenomes, including 37 new Antarctic metagenomes. The large size of the dataset enabled internal transcri...

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Published in:Molecular Systems Biology
Main Authors: Brown, MV, Lauro, FM, Demaere, MZ, Muir, L, Wilkins, D, Thomas, T, Riddle, M, Fuhrman, J, Andrews-Pfannkoch, C, Hoffman, JM, McQuaid, J, Allen, A, Rintoul, S, Cavicchioli, R
Format: Article in Journal/Newspaper
Language:unknown
Published: Nature Publishing Group 2012
Subjects:
Online Access:http://hdl.handle.net/1959.4/unsworks_49910
https://unsworks.unsw.edu.au/bitstreams/a9040bcb-1c21-43fa-864a-e76dad29792c/download
https://doi.org/10.1038/msb.2012.28
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spelling ftunswworks:oai:unsworks.library.unsw.edu.au:1959.4/unsworks_49910 2024-06-02T07:57:59+00:00 Global biogeography of SAR11 marine bacteria Brown, MV Lauro, FM Demaere, MZ Muir, L Wilkins, D Thomas, T Riddle, M Fuhrman, J Andrews-Pfannkoch, C Hoffman, JM McQuaid, J Allen, A Rintoul, S Cavicchioli, R 2012 application/pdf http://hdl.handle.net/1959.4/unsworks_49910 https://unsworks.unsw.edu.au/bitstreams/a9040bcb-1c21-43fa-864a-e76dad29792c/download https://doi.org/10.1038/msb.2012.28 unknown Nature Publishing Group http://purl.org/au-research/grants/arc/DP1095504 http://hdl.handle.net/1959.4/unsworks_49910 https://unsworks.unsw.edu.au/bitstreams/a9040bcb-1c21-43fa-864a-e76dad29792c/download https://doi.org/10.1038/msb.2012.28 open access https://purl.org/coar/access_right/c_abf2 CC BY-NC-ND https://creativecommons.org/licenses/by-nc-nd/4.0/ free_to_read urn:ISSN:1744-4292 Molecular Systems Biology, 8, 1, 595 14 Life Below Water Alphaproteobacteria Antarctic Regions Climate Genome Bacterial Marine Biology Metagenome Models Biological Phylogeny Phylogeography Seawater Sequence Alignment Temperature anzsrc-for: 060102 Bioinformatics anzsrc-for: 0605 Microbiology anzsrc-for: 0601 Biochemistry and Cell Biology anzsrc-for: 0699 Other Biological Sciences journal article http://purl.org/coar/resource_type/c_6501 2012 ftunswworks https://doi.org/10.1038/msb.2012.28 2024-05-07T23:55:04Z The ubiquitous SAR11 bacterial clade is the most abundant type of organism in the world's oceans, but the reasons for its success are not fully elucidated. We analysed 128 surface marine metagenomes, including 37 new Antarctic metagenomes. The large size of the dataset enabled internal transcribed spacer (ITS) regions to be obtained from the Southern polar region, enabling the first global characterisation of the distribution of SAR11, from waters spanning temperatures -2ºC to 30ºC. Our data show a stable co-occurrence of phylotypes within both "tropical" (>20ºC) and "polar" ( Article in Journal/Newspaper Antarc* Antarctic UNSW Sydney (The University of New South Wales): UNSWorks Antarctic Molecular Systems Biology 8 1 595
institution Open Polar
collection UNSW Sydney (The University of New South Wales): UNSWorks
op_collection_id ftunswworks
language unknown
topic 14 Life Below Water
Alphaproteobacteria
Antarctic Regions
Climate
Genome
Bacterial
Marine Biology
Metagenome
Models
Biological
Phylogeny
Phylogeography
Seawater
Sequence Alignment
Temperature
anzsrc-for: 060102 Bioinformatics
anzsrc-for: 0605 Microbiology
anzsrc-for: 0601 Biochemistry and Cell Biology
anzsrc-for: 0699 Other Biological Sciences
spellingShingle 14 Life Below Water
Alphaproteobacteria
Antarctic Regions
Climate
Genome
Bacterial
Marine Biology
Metagenome
Models
Biological
Phylogeny
Phylogeography
Seawater
Sequence Alignment
Temperature
anzsrc-for: 060102 Bioinformatics
anzsrc-for: 0605 Microbiology
anzsrc-for: 0601 Biochemistry and Cell Biology
anzsrc-for: 0699 Other Biological Sciences
Brown, MV
Lauro, FM
Demaere, MZ
Muir, L
Wilkins, D
Thomas, T
Riddle, M
Fuhrman, J
Andrews-Pfannkoch, C
Hoffman, JM
McQuaid, J
Allen, A
Rintoul, S
Cavicchioli, R
Global biogeography of SAR11 marine bacteria
topic_facet 14 Life Below Water
Alphaproteobacteria
Antarctic Regions
Climate
Genome
Bacterial
Marine Biology
Metagenome
Models
Biological
Phylogeny
Phylogeography
Seawater
Sequence Alignment
Temperature
anzsrc-for: 060102 Bioinformatics
anzsrc-for: 0605 Microbiology
anzsrc-for: 0601 Biochemistry and Cell Biology
anzsrc-for: 0699 Other Biological Sciences
description The ubiquitous SAR11 bacterial clade is the most abundant type of organism in the world's oceans, but the reasons for its success are not fully elucidated. We analysed 128 surface marine metagenomes, including 37 new Antarctic metagenomes. The large size of the dataset enabled internal transcribed spacer (ITS) regions to be obtained from the Southern polar region, enabling the first global characterisation of the distribution of SAR11, from waters spanning temperatures -2ºC to 30ºC. Our data show a stable co-occurrence of phylotypes within both "tropical" (>20ºC) and "polar" (
format Article in Journal/Newspaper
author Brown, MV
Lauro, FM
Demaere, MZ
Muir, L
Wilkins, D
Thomas, T
Riddle, M
Fuhrman, J
Andrews-Pfannkoch, C
Hoffman, JM
McQuaid, J
Allen, A
Rintoul, S
Cavicchioli, R
author_facet Brown, MV
Lauro, FM
Demaere, MZ
Muir, L
Wilkins, D
Thomas, T
Riddle, M
Fuhrman, J
Andrews-Pfannkoch, C
Hoffman, JM
McQuaid, J
Allen, A
Rintoul, S
Cavicchioli, R
author_sort Brown, MV
title Global biogeography of SAR11 marine bacteria
title_short Global biogeography of SAR11 marine bacteria
title_full Global biogeography of SAR11 marine bacteria
title_fullStr Global biogeography of SAR11 marine bacteria
title_full_unstemmed Global biogeography of SAR11 marine bacteria
title_sort global biogeography of sar11 marine bacteria
publisher Nature Publishing Group
publishDate 2012
url http://hdl.handle.net/1959.4/unsworks_49910
https://unsworks.unsw.edu.au/bitstreams/a9040bcb-1c21-43fa-864a-e76dad29792c/download
https://doi.org/10.1038/msb.2012.28
geographic Antarctic
geographic_facet Antarctic
genre Antarc*
Antarctic
genre_facet Antarc*
Antarctic
op_source urn:ISSN:1744-4292
Molecular Systems Biology, 8, 1, 595
op_relation http://purl.org/au-research/grants/arc/DP1095504
http://hdl.handle.net/1959.4/unsworks_49910
https://unsworks.unsw.edu.au/bitstreams/a9040bcb-1c21-43fa-864a-e76dad29792c/download
https://doi.org/10.1038/msb.2012.28
op_rights open access
https://purl.org/coar/access_right/c_abf2
CC BY-NC-ND
https://creativecommons.org/licenses/by-nc-nd/4.0/
free_to_read
op_doi https://doi.org/10.1038/msb.2012.28
container_title Molecular Systems Biology
container_volume 8
container_issue 1
container_start_page 595
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