FragSAD:a database of diversity and species abundance distributions from habitat fragments
Habitat destruction is the single greatest anthropogenic threat to biodiversity. Decades of research on this issue have led to the accumulation of hundreds of data sets comparing species assemblages in larger, intact, habitats to smaller, more fragmented, habitats. Despite this, little synthesis or...
Published in: | Ecology |
---|---|
Main Authors: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
Format: | Article in Journal/Newspaper |
Language: | English |
Published: |
2019
|
Subjects: | |
Online Access: | https://research-portal.st-andrews.ac.uk/en/publications/eceb8d91-336e-4812-8efc-694d22489b78 https://doi.org/10.1002/ecy.2861 https://research-repository.st-andrews.ac.uk/bitstream/10023/19160/1/Chase_et_al_2019_Ecology.pdf http://usir.salford.ac.uk/id/eprint/51975 |
id |
ftunstandrewcris:oai:research-portal.st-andrews.ac.uk:publications/eceb8d91-336e-4812-8efc-694d22489b78 |
---|---|
record_format |
openpolar |
institution |
Open Polar |
collection |
University of St Andrews: Research Portal |
op_collection_id |
ftunstandrewcris |
language |
English |
topic |
Disturbance Habitat fragmentation Habitat loss Species abundance distribution Species richness Species–area relationship |
spellingShingle |
Disturbance Habitat fragmentation Habitat loss Species abundance distribution Species richness Species–area relationship Chase, Jonathan M. Liebergesell, Mario Sagouis, Alban May, Felix Blowes, Shane A. Berg, Åke Bernard, Enrico Brosi, Berry J. Cadotte, Marc W. Cayuela, Luis Chiarello, Adriano G. Cosson, Jean Francois Cresswell, Will Dami, Filibus Danjuma Dauber, Jens Dickman, Chris R. Didham, Raphael K. Edwards, David P. Farneda, Fábio Z. Gavish, Yoni Gonçalves-Souza, Thiago Guadagnin, Demetrio Luis Henry, Mickaël López-Baucells, Adrià Kappes, Heike Mac Nally, Ralph Manu, Shiiwua Martensen, Alexandre Camargo McCollin, Duncan Meyer, Christoph F.J. Neckel-Oliveira, Selvino Nogueira, André Pons, Jean-Marc Raheem, Dinarzarde C. Ramos, Flavio Nunes Rocha, Ricardo Sam, Katerina Slade, Eleanor Stireman, John O. Struebig, Matthew J. Vasconcelos, Heraldo Ziv, Yaron FragSAD:a database of diversity and species abundance distributions from habitat fragments |
topic_facet |
Disturbance Habitat fragmentation Habitat loss Species abundance distribution Species richness Species–area relationship |
description |
Habitat destruction is the single greatest anthropogenic threat to biodiversity. Decades of research on this issue have led to the accumulation of hundreds of data sets comparing species assemblages in larger, intact, habitats to smaller, more fragmented, habitats. Despite this, little synthesis or consensus has been achieved, primarily because of non-standardized sampling methodology and analyses of notoriously scale-dependent response variables (i.e., species richness). To be able to compare and contrast the results of habitat fragmentation on species’ assemblages, it is necessary to have the underlying data on species abundances and sampling intensity, so that standardization can be achieved. To accomplish this, we systematically searched the literature for studies where abundances of species in assemblages (of any taxa) were sampled from many habitat patches that varied in size. From these, we extracted data from several studies, and contacted authors of studies where appropriate data were collected but not published, giving us 117 studies that compared species assemblages among habitat fragments that varied in area. Less than one-half (41) of studies came from tropical forests of Central and South America, but there were many studies from temperate forests and grasslands from all continents except Antarctica. Fifty-four of the studies were on invertebrates (mostly insects), but there were several studies on plants (15), birds (16), mammals (19), and reptiles and amphibians (13). We also collected qualitative information on the length of time since fragmentation. With data on total and relative abundances (and identities) of species, sampling effort, and affiliated meta-data about the study sites, these data can be used to more definitively test hypotheses about the role of habitat fragmentation in altering patterns of biodiversity. There are no copyright restrictions. Please cite this data paper and the associated Dryad data set if the data are used in publications. |
format |
Article in Journal/Newspaper |
author |
Chase, Jonathan M. Liebergesell, Mario Sagouis, Alban May, Felix Blowes, Shane A. Berg, Åke Bernard, Enrico Brosi, Berry J. Cadotte, Marc W. Cayuela, Luis Chiarello, Adriano G. Cosson, Jean Francois Cresswell, Will Dami, Filibus Danjuma Dauber, Jens Dickman, Chris R. Didham, Raphael K. Edwards, David P. Farneda, Fábio Z. Gavish, Yoni Gonçalves-Souza, Thiago Guadagnin, Demetrio Luis Henry, Mickaël López-Baucells, Adrià Kappes, Heike Mac Nally, Ralph Manu, Shiiwua Martensen, Alexandre Camargo McCollin, Duncan Meyer, Christoph F.J. Neckel-Oliveira, Selvino Nogueira, André Pons, Jean-Marc Raheem, Dinarzarde C. Ramos, Flavio Nunes Rocha, Ricardo Sam, Katerina Slade, Eleanor Stireman, John O. Struebig, Matthew J. Vasconcelos, Heraldo Ziv, Yaron |
author_facet |
Chase, Jonathan M. Liebergesell, Mario Sagouis, Alban May, Felix Blowes, Shane A. Berg, Åke Bernard, Enrico Brosi, Berry J. Cadotte, Marc W. Cayuela, Luis Chiarello, Adriano G. Cosson, Jean Francois Cresswell, Will Dami, Filibus Danjuma Dauber, Jens Dickman, Chris R. Didham, Raphael K. Edwards, David P. Farneda, Fábio Z. Gavish, Yoni Gonçalves-Souza, Thiago Guadagnin, Demetrio Luis Henry, Mickaël López-Baucells, Adrià Kappes, Heike Mac Nally, Ralph Manu, Shiiwua Martensen, Alexandre Camargo McCollin, Duncan Meyer, Christoph F.J. Neckel-Oliveira, Selvino Nogueira, André Pons, Jean-Marc Raheem, Dinarzarde C. Ramos, Flavio Nunes Rocha, Ricardo Sam, Katerina Slade, Eleanor Stireman, John O. Struebig, Matthew J. Vasconcelos, Heraldo Ziv, Yaron |
author_sort |
Chase, Jonathan M. |
title |
FragSAD:a database of diversity and species abundance distributions from habitat fragments |
title_short |
FragSAD:a database of diversity and species abundance distributions from habitat fragments |
title_full |
FragSAD:a database of diversity and species abundance distributions from habitat fragments |
title_fullStr |
FragSAD:a database of diversity and species abundance distributions from habitat fragments |
title_full_unstemmed |
FragSAD:a database of diversity and species abundance distributions from habitat fragments |
title_sort |
fragsad:a database of diversity and species abundance distributions from habitat fragments |
publishDate |
2019 |
url |
https://research-portal.st-andrews.ac.uk/en/publications/eceb8d91-336e-4812-8efc-694d22489b78 https://doi.org/10.1002/ecy.2861 https://research-repository.st-andrews.ac.uk/bitstream/10023/19160/1/Chase_et_al_2019_Ecology.pdf http://usir.salford.ac.uk/id/eprint/51975 |
genre |
Antarc* Antarctica |
genre_facet |
Antarc* Antarctica |
op_source |
Chase , J M , Liebergesell , M , Sagouis , A , May , F , Blowes , S A , Berg , Å , Bernard , E , Brosi , B J , Cadotte , M W , Cayuela , L , Chiarello , A G , Cosson , J F , Cresswell , W , Dami , F D , Dauber , J , Dickman , C R , Didham , R K , Edwards , D P , Farneda , F Z , Gavish , Y , Gonçalves-Souza , T , Guadagnin , D L , Henry , M , López-Baucells , A , Kappes , H , Mac Nally , R , Manu , S , Martensen , A C , McCollin , D , Meyer , C F J , Neckel-Oliveira , S , Nogueira , A , Pons , J-M , Raheem , D C , Ramos , F N , Rocha , R , Sam , K , Slade , E , Stireman , J O , Struebig , M J , Vasconcelos , H & Ziv , Y 2019 , ' FragSAD : a database of diversity and species abundance distributions from habitat fragments ' , Ecology , vol. 100 , no. 12 , e02861 . https://doi.org/10.1002/ecy.2861 |
op_relation |
https://research-portal.st-andrews.ac.uk/en/publications/eceb8d91-336e-4812-8efc-694d22489b78 |
op_rights |
info:eu-repo/semantics/openAccess |
op_doi |
https://doi.org/10.1002/ecy.2861 |
container_title |
Ecology |
container_volume |
100 |
container_issue |
12 |
_version_ |
1810493430133948416 |
spelling |
ftunstandrewcris:oai:research-portal.st-andrews.ac.uk:publications/eceb8d91-336e-4812-8efc-694d22489b78 2024-09-15T17:45:33+00:00 FragSAD:a database of diversity and species abundance distributions from habitat fragments Chase, Jonathan M. Liebergesell, Mario Sagouis, Alban May, Felix Blowes, Shane A. Berg, Åke Bernard, Enrico Brosi, Berry J. Cadotte, Marc W. Cayuela, Luis Chiarello, Adriano G. Cosson, Jean Francois Cresswell, Will Dami, Filibus Danjuma Dauber, Jens Dickman, Chris R. Didham, Raphael K. Edwards, David P. Farneda, Fábio Z. Gavish, Yoni Gonçalves-Souza, Thiago Guadagnin, Demetrio Luis Henry, Mickaël López-Baucells, Adrià Kappes, Heike Mac Nally, Ralph Manu, Shiiwua Martensen, Alexandre Camargo McCollin, Duncan Meyer, Christoph F.J. Neckel-Oliveira, Selvino Nogueira, André Pons, Jean-Marc Raheem, Dinarzarde C. Ramos, Flavio Nunes Rocha, Ricardo Sam, Katerina Slade, Eleanor Stireman, John O. Struebig, Matthew J. Vasconcelos, Heraldo Ziv, Yaron 2019-12 application/pdf https://research-portal.st-andrews.ac.uk/en/publications/eceb8d91-336e-4812-8efc-694d22489b78 https://doi.org/10.1002/ecy.2861 https://research-repository.st-andrews.ac.uk/bitstream/10023/19160/1/Chase_et_al_2019_Ecology.pdf http://usir.salford.ac.uk/id/eprint/51975 eng eng https://research-portal.st-andrews.ac.uk/en/publications/eceb8d91-336e-4812-8efc-694d22489b78 info:eu-repo/semantics/openAccess Chase , J M , Liebergesell , M , Sagouis , A , May , F , Blowes , S A , Berg , Å , Bernard , E , Brosi , B J , Cadotte , M W , Cayuela , L , Chiarello , A G , Cosson , J F , Cresswell , W , Dami , F D , Dauber , J , Dickman , C R , Didham , R K , Edwards , D P , Farneda , F Z , Gavish , Y , Gonçalves-Souza , T , Guadagnin , D L , Henry , M , López-Baucells , A , Kappes , H , Mac Nally , R , Manu , S , Martensen , A C , McCollin , D , Meyer , C F J , Neckel-Oliveira , S , Nogueira , A , Pons , J-M , Raheem , D C , Ramos , F N , Rocha , R , Sam , K , Slade , E , Stireman , J O , Struebig , M J , Vasconcelos , H & Ziv , Y 2019 , ' FragSAD : a database of diversity and species abundance distributions from habitat fragments ' , Ecology , vol. 100 , no. 12 , e02861 . https://doi.org/10.1002/ecy.2861 Disturbance Habitat fragmentation Habitat loss Species abundance distribution Species richness Species–area relationship article 2019 ftunstandrewcris https://doi.org/10.1002/ecy.2861 2024-08-28T23:42:37Z Habitat destruction is the single greatest anthropogenic threat to biodiversity. Decades of research on this issue have led to the accumulation of hundreds of data sets comparing species assemblages in larger, intact, habitats to smaller, more fragmented, habitats. Despite this, little synthesis or consensus has been achieved, primarily because of non-standardized sampling methodology and analyses of notoriously scale-dependent response variables (i.e., species richness). To be able to compare and contrast the results of habitat fragmentation on species’ assemblages, it is necessary to have the underlying data on species abundances and sampling intensity, so that standardization can be achieved. To accomplish this, we systematically searched the literature for studies where abundances of species in assemblages (of any taxa) were sampled from many habitat patches that varied in size. From these, we extracted data from several studies, and contacted authors of studies where appropriate data were collected but not published, giving us 117 studies that compared species assemblages among habitat fragments that varied in area. Less than one-half (41) of studies came from tropical forests of Central and South America, but there were many studies from temperate forests and grasslands from all continents except Antarctica. Fifty-four of the studies were on invertebrates (mostly insects), but there were several studies on plants (15), birds (16), mammals (19), and reptiles and amphibians (13). We also collected qualitative information on the length of time since fragmentation. With data on total and relative abundances (and identities) of species, sampling effort, and affiliated meta-data about the study sites, these data can be used to more definitively test hypotheses about the role of habitat fragmentation in altering patterns of biodiversity. There are no copyright restrictions. Please cite this data paper and the associated Dryad data set if the data are used in publications. Article in Journal/Newspaper Antarc* Antarctica University of St Andrews: Research Portal Ecology 100 12 |