Silbido profundo :an open source package for the use of deep learning to detect odontocete whistles
This work presents an open-source matlab software package for exploiting recent advances in extracting tonal signals from large acoustic data sets. A whistle extraction algorithm published by Li, Liu, Palmer, Fleishman, Gillespie, Nosal, Shiu, Klinck, Cholewiak, Helble, and Roch [(2020). P roceeding...
Published in: | The Journal of the Acoustical Society of America |
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2022
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Online Access: | https://research-portal.st-andrews.ac.uk/en/researchoutput/silbido-profundo(de0d03ea-698f-4aa3-8a87-3858658c1220).html https://doi.org/10.1121/10.0016631 https://research-repository.st-andrews.ac.uk/bitstream/10023/26799/1/Conant_2022_JSA_Silbido_profundo_CC.pdf |
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ftunstandrewcris:oai:research-portal.st-andrews.ac.uk:publications/de0d03ea-698f-4aa3-8a87-3858658c1220 2024-06-23T07:57:11+00:00 Silbido profundo :an open source package for the use of deep learning to detect odontocete whistles Conant, Peter C. Li, Pu Liu, Xiaobai Klinck, Holger Fleishman, Erica Gillespie, Douglas Nosal, Eva-Marie Roch, Marie A. 2022-12-27 application/pdf https://research-portal.st-andrews.ac.uk/en/researchoutput/silbido-profundo(de0d03ea-698f-4aa3-8a87-3858658c1220).html https://doi.org/10.1121/10.0016631 https://research-repository.st-andrews.ac.uk/bitstream/10023/26799/1/Conant_2022_JSA_Silbido_profundo_CC.pdf eng eng https://research-portal.st-andrews.ac.uk/en/researchoutput/silbido-profundo(de0d03ea-698f-4aa3-8a87-3858658c1220).html info:eu-repo/semantics/openAccess Conant , P C , Li , P , Liu , X , Klinck , H , Fleishman , E , Gillespie , D , Nosal , E-M & Roch , M A 2022 , ' Silbido profundo : an open source package for the use of deep learning to detect odontocete whistles ' , Journal of the Acoustical Society of America , vol. 152 , no. 6 , pp. 3800-3808 . https://doi.org/10.1121/10.0016631 Acoustics and ultrasonics article 2022 ftunstandrewcris https://doi.org/10.1121/10.0016631 2024-06-13T01:23:47Z This work presents an open-source matlab software package for exploiting recent advances in extracting tonal signals from large acoustic data sets. A whistle extraction algorithm published by Li, Liu, Palmer, Fleishman, Gillespie, Nosal, Shiu, Klinck, Cholewiak, Helble, and Roch [(2020). P roceedings of the International Joint Conference on Neural Networks , July 19–24, Glasgow, Scotland, p. 10] is incorporated into silbido , an established software package for extraction of cetacean tonal calls. The precision and recall of the new system were over 96% and nearly 80%, respectively, when applied to a whistle extraction task on a challenging two-species subset of a conference-benchmark data set. A second data set was examined to assess whether the algorithm generalized to data that were collected across different recording devices and locations. These data included 487 h of weakly labeled, towed array data collected in the Pacific Ocean on two National Oceanographic and Atmospheric Administration (NOAA) cruises. Labels for these data consisted of regions of toothed whale presence for at least 15 species that were based on visual and acoustic observations and not limited to whistles. Although the lack of per whistle-level annotations prevented measurement of precision and recall, there was strong concurrence of automatic detections and the NOAA annotations, suggesting that the algorithm generalizes well to new data. Article in Journal/Newspaper toothed whale University of St Andrews: Research Portal Pacific Silbido ENVELOPE(-67.593,-67.593,-67.497,-67.497) The Journal of the Acoustical Society of America 152 6 3800 3808 |
institution |
Open Polar |
collection |
University of St Andrews: Research Portal |
op_collection_id |
ftunstandrewcris |
language |
English |
topic |
Acoustics and ultrasonics |
spellingShingle |
Acoustics and ultrasonics Conant, Peter C. Li, Pu Liu, Xiaobai Klinck, Holger Fleishman, Erica Gillespie, Douglas Nosal, Eva-Marie Roch, Marie A. Silbido profundo :an open source package for the use of deep learning to detect odontocete whistles |
topic_facet |
Acoustics and ultrasonics |
description |
This work presents an open-source matlab software package for exploiting recent advances in extracting tonal signals from large acoustic data sets. A whistle extraction algorithm published by Li, Liu, Palmer, Fleishman, Gillespie, Nosal, Shiu, Klinck, Cholewiak, Helble, and Roch [(2020). P roceedings of the International Joint Conference on Neural Networks , July 19–24, Glasgow, Scotland, p. 10] is incorporated into silbido , an established software package for extraction of cetacean tonal calls. The precision and recall of the new system were over 96% and nearly 80%, respectively, when applied to a whistle extraction task on a challenging two-species subset of a conference-benchmark data set. A second data set was examined to assess whether the algorithm generalized to data that were collected across different recording devices and locations. These data included 487 h of weakly labeled, towed array data collected in the Pacific Ocean on two National Oceanographic and Atmospheric Administration (NOAA) cruises. Labels for these data consisted of regions of toothed whale presence for at least 15 species that were based on visual and acoustic observations and not limited to whistles. Although the lack of per whistle-level annotations prevented measurement of precision and recall, there was strong concurrence of automatic detections and the NOAA annotations, suggesting that the algorithm generalizes well to new data. |
format |
Article in Journal/Newspaper |
author |
Conant, Peter C. Li, Pu Liu, Xiaobai Klinck, Holger Fleishman, Erica Gillespie, Douglas Nosal, Eva-Marie Roch, Marie A. |
author_facet |
Conant, Peter C. Li, Pu Liu, Xiaobai Klinck, Holger Fleishman, Erica Gillespie, Douglas Nosal, Eva-Marie Roch, Marie A. |
author_sort |
Conant, Peter C. |
title |
Silbido profundo :an open source package for the use of deep learning to detect odontocete whistles |
title_short |
Silbido profundo :an open source package for the use of deep learning to detect odontocete whistles |
title_full |
Silbido profundo :an open source package for the use of deep learning to detect odontocete whistles |
title_fullStr |
Silbido profundo :an open source package for the use of deep learning to detect odontocete whistles |
title_full_unstemmed |
Silbido profundo :an open source package for the use of deep learning to detect odontocete whistles |
title_sort |
silbido profundo :an open source package for the use of deep learning to detect odontocete whistles |
publishDate |
2022 |
url |
https://research-portal.st-andrews.ac.uk/en/researchoutput/silbido-profundo(de0d03ea-698f-4aa3-8a87-3858658c1220).html https://doi.org/10.1121/10.0016631 https://research-repository.st-andrews.ac.uk/bitstream/10023/26799/1/Conant_2022_JSA_Silbido_profundo_CC.pdf |
long_lat |
ENVELOPE(-67.593,-67.593,-67.497,-67.497) |
geographic |
Pacific Silbido |
geographic_facet |
Pacific Silbido |
genre |
toothed whale |
genre_facet |
toothed whale |
op_source |
Conant , P C , Li , P , Liu , X , Klinck , H , Fleishman , E , Gillespie , D , Nosal , E-M & Roch , M A 2022 , ' Silbido profundo : an open source package for the use of deep learning to detect odontocete whistles ' , Journal of the Acoustical Society of America , vol. 152 , no. 6 , pp. 3800-3808 . https://doi.org/10.1121/10.0016631 |
op_relation |
https://research-portal.st-andrews.ac.uk/en/researchoutput/silbido-profundo(de0d03ea-698f-4aa3-8a87-3858658c1220).html |
op_rights |
info:eu-repo/semantics/openAccess |
op_doi |
https://doi.org/10.1121/10.0016631 |
container_title |
The Journal of the Acoustical Society of America |
container_volume |
152 |
container_issue |
6 |
container_start_page |
3800 |
op_container_end_page |
3808 |
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1802650711134044160 |