Absolute abundance estimates from shallow water baited underwater camera surveys; a stochastic modelling approach tested against field data

Baited underwater cameras are becoming a popular tool to monitor fish and invertebrate populations within protected and inshore environments where trawl surveys are unsuitable. Modelling the arrival times of deep-sea grenadiers using an inverse square relationship has enabled abundance estimates, co...

Full description

Bibliographic Details
Published in:Journal of Experimental Marine Biology and Ecology
Main Authors: Dunlop, K.M., Ruxton, G.D., Scott, E.M., Bailey, D.M.
Format: Article in Journal/Newspaper
Language:English
Published: 2015
Subjects:
Online Access:https://research-portal.st-andrews.ac.uk/en/researchoutput/absolute-abundance-estimates-from-shallow-water-baited-underwater-camera-surveys-a-stochastic-modelling-approach-tested-against-field-data(b206d163-78d4-4b5c-92b2-7ed3ed175a4d).html
https://doi.org/10.1016/j.jembe.2015.07.010
https://research-repository.st-andrews.ac.uk/bitstream/10023/9328/1/Ruxton_2016_JEMBE_Absolute_AAM.pdf
id ftunstandrewcris:oai:research-portal.st-andrews.ac.uk:publications/b206d163-78d4-4b5c-92b2-7ed3ed175a4d
record_format openpolar
spelling ftunstandrewcris:oai:research-portal.st-andrews.ac.uk:publications/b206d163-78d4-4b5c-92b2-7ed3ed175a4d 2024-06-23T07:47:58+00:00 Absolute abundance estimates from shallow water baited underwater camera surveys; a stochastic modelling approach tested against field data Dunlop, K.M. Ruxton, G.D. Scott, E.M. Bailey, D.M. 2015-11 application/pdf https://research-portal.st-andrews.ac.uk/en/researchoutput/absolute-abundance-estimates-from-shallow-water-baited-underwater-camera-surveys-a-stochastic-modelling-approach-tested-against-field-data(b206d163-78d4-4b5c-92b2-7ed3ed175a4d).html https://doi.org/10.1016/j.jembe.2015.07.010 https://research-repository.st-andrews.ac.uk/bitstream/10023/9328/1/Ruxton_2016_JEMBE_Absolute_AAM.pdf eng eng https://research-portal.st-andrews.ac.uk/en/researchoutput/absolute-abundance-estimates-from-shallow-water-baited-underwater-camera-surveys-a-stochastic-modelling-approach-tested-against-field-data(b206d163-78d4-4b5c-92b2-7ed3ed175a4d).html info:eu-repo/semantics/openAccess Dunlop , K M , Ruxton , G D , Scott , E M & Bailey , D M 2015 , ' Absolute abundance estimates from shallow water baited underwater camera surveys; a stochastic modelling approach tested against field data ' , Journal of Experimental Marine Biology and Ecology , vol. 472 , pp. 126-134 . https://doi.org/10.1016/j.jembe.2015.07.010 Baited underwater cameras Modelling Fish and invertebrate surveys Underwater visual census article 2015 ftunstandrewcris https://doi.org/10.1016/j.jembe.2015.07.010 2024-06-13T00:48:07Z Baited underwater cameras are becoming a popular tool to monitor fish and invertebrate populations within protected and inshore environments where trawl surveys are unsuitable. Modelling the arrival times of deep-sea grenadiers using an inverse square relationship has enabled abundance estimates, comparable to those from bottom trawl surveys, to be gathered from deep-sea baited camera surveys. Baited underwater camera systems in the shallow water environments are however, currently limited to relative comparisons of assemblages based on simple metrics such as MaxN (maximum number of fish seen at any one time). This study describes a stochastic simulation approach used to model the behaviour of fish and invertebrates around a BUC system to enable absolute abundance estimates to be generated from arrival patterns. Species-specific models were developed for the tropical reef fishes the black tip grouper ( Epinephelus fasciatus ) and moray eel ( Gymnothorax spp.) and the Antarctic scavengers; the asteroid ( Odontaster validus ) and the nemertean worm ( Parbolasia corrugatus ). A sensitivity analysis explored the impact of input parameters on the arrival patterns (MaxN, time to the arrival of the first individual and the time to reach MaxN) for each species generated by the model. Sensitivity analysis showed a particularly strong link between MaxN and abundance indicating that this model could be used to generate absolute abundances from existing or future MaxN data. It in effect allows the slope of the MaxN vs. abundance relationship to be estimated. Arrival patterns generated by each model were used to estimate population abundance for the focal species and these estimates were compared to data from underwater visual census transects. Using a Bland-Altman analysis, baited underwater camera data processed using this model were shown to generate absolute abundance estimates that were comparable to underwater visual census data. Article in Journal/Newspaper Antarc* Antarctic University of St Andrews: Research Portal Antarctic The Antarctic Journal of Experimental Marine Biology and Ecology 472 126 134
institution Open Polar
collection University of St Andrews: Research Portal
op_collection_id ftunstandrewcris
language English
topic Baited underwater cameras
Modelling
Fish and invertebrate surveys
Underwater visual census
spellingShingle Baited underwater cameras
Modelling
Fish and invertebrate surveys
Underwater visual census
Dunlop, K.M.
Ruxton, G.D.
Scott, E.M.
Bailey, D.M.
Absolute abundance estimates from shallow water baited underwater camera surveys; a stochastic modelling approach tested against field data
topic_facet Baited underwater cameras
Modelling
Fish and invertebrate surveys
Underwater visual census
description Baited underwater cameras are becoming a popular tool to monitor fish and invertebrate populations within protected and inshore environments where trawl surveys are unsuitable. Modelling the arrival times of deep-sea grenadiers using an inverse square relationship has enabled abundance estimates, comparable to those from bottom trawl surveys, to be gathered from deep-sea baited camera surveys. Baited underwater camera systems in the shallow water environments are however, currently limited to relative comparisons of assemblages based on simple metrics such as MaxN (maximum number of fish seen at any one time). This study describes a stochastic simulation approach used to model the behaviour of fish and invertebrates around a BUC system to enable absolute abundance estimates to be generated from arrival patterns. Species-specific models were developed for the tropical reef fishes the black tip grouper ( Epinephelus fasciatus ) and moray eel ( Gymnothorax spp.) and the Antarctic scavengers; the asteroid ( Odontaster validus ) and the nemertean worm ( Parbolasia corrugatus ). A sensitivity analysis explored the impact of input parameters on the arrival patterns (MaxN, time to the arrival of the first individual and the time to reach MaxN) for each species generated by the model. Sensitivity analysis showed a particularly strong link between MaxN and abundance indicating that this model could be used to generate absolute abundances from existing or future MaxN data. It in effect allows the slope of the MaxN vs. abundance relationship to be estimated. Arrival patterns generated by each model were used to estimate population abundance for the focal species and these estimates were compared to data from underwater visual census transects. Using a Bland-Altman analysis, baited underwater camera data processed using this model were shown to generate absolute abundance estimates that were comparable to underwater visual census data.
format Article in Journal/Newspaper
author Dunlop, K.M.
Ruxton, G.D.
Scott, E.M.
Bailey, D.M.
author_facet Dunlop, K.M.
Ruxton, G.D.
Scott, E.M.
Bailey, D.M.
author_sort Dunlop, K.M.
title Absolute abundance estimates from shallow water baited underwater camera surveys; a stochastic modelling approach tested against field data
title_short Absolute abundance estimates from shallow water baited underwater camera surveys; a stochastic modelling approach tested against field data
title_full Absolute abundance estimates from shallow water baited underwater camera surveys; a stochastic modelling approach tested against field data
title_fullStr Absolute abundance estimates from shallow water baited underwater camera surveys; a stochastic modelling approach tested against field data
title_full_unstemmed Absolute abundance estimates from shallow water baited underwater camera surveys; a stochastic modelling approach tested against field data
title_sort absolute abundance estimates from shallow water baited underwater camera surveys; a stochastic modelling approach tested against field data
publishDate 2015
url https://research-portal.st-andrews.ac.uk/en/researchoutput/absolute-abundance-estimates-from-shallow-water-baited-underwater-camera-surveys-a-stochastic-modelling-approach-tested-against-field-data(b206d163-78d4-4b5c-92b2-7ed3ed175a4d).html
https://doi.org/10.1016/j.jembe.2015.07.010
https://research-repository.st-andrews.ac.uk/bitstream/10023/9328/1/Ruxton_2016_JEMBE_Absolute_AAM.pdf
geographic Antarctic
The Antarctic
geographic_facet Antarctic
The Antarctic
genre Antarc*
Antarctic
genre_facet Antarc*
Antarctic
op_source Dunlop , K M , Ruxton , G D , Scott , E M & Bailey , D M 2015 , ' Absolute abundance estimates from shallow water baited underwater camera surveys; a stochastic modelling approach tested against field data ' , Journal of Experimental Marine Biology and Ecology , vol. 472 , pp. 126-134 . https://doi.org/10.1016/j.jembe.2015.07.010
op_relation https://research-portal.st-andrews.ac.uk/en/researchoutput/absolute-abundance-estimates-from-shallow-water-baited-underwater-camera-surveys-a-stochastic-modelling-approach-tested-against-field-data(b206d163-78d4-4b5c-92b2-7ed3ed175a4d).html
op_rights info:eu-repo/semantics/openAccess
op_doi https://doi.org/10.1016/j.jembe.2015.07.010
container_title Journal of Experimental Marine Biology and Ecology
container_volume 472
container_start_page 126
op_container_end_page 134
_version_ 1802638295139614720