Validating the use of generalized additive models and at-sea surveys to estimate size and temporal trends of seabird populations

1. The population size of seabirds is often difficult to estimate from surveys at breeding colonies because of factors such as burrow nesting and nocturnal breeding. The reliability of alternative surveys conducted at sea has not previously been validated. Sample-based estimates from at-sea surveys...

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Published in:Journal of Applied Ecology
Main Authors: Clarke, ED, Spear, LB, McCracken, ML, Marques, FFC, Borchers, David Louis, Buckland, Stephen Terrence, Ainley, DG
Format: Article in Journal/Newspaper
Language:English
Published: 2003
Subjects:
AGE
Online Access:https://research-portal.st-andrews.ac.uk/en/researchoutput/validating-the-use-of-generalized-additive-models-and-atsea-surveys-to-estimate-size-and-temporal-trends-of-seabird-populations(50f91926-a1ca-41f2-9d05-e80ef6ff5453).html
https://doi.org/10.1046/j.1365-2664.2003.00802.x
http://www.scopus.com/inward/record.url?scp=0012954678&partnerID=8YFLogxK
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spelling ftunstandrewcris:oai:research-portal.st-andrews.ac.uk:publications/50f91926-a1ca-41f2-9d05-e80ef6ff5453 2024-06-23T07:52:11+00:00 Validating the use of generalized additive models and at-sea surveys to estimate size and temporal trends of seabird populations Clarke, ED Spear, LB McCracken, ML Marques, FFC Borchers, David Louis Buckland, Stephen Terrence Ainley, DG 2003-04 https://research-portal.st-andrews.ac.uk/en/researchoutput/validating-the-use-of-generalized-additive-models-and-atsea-surveys-to-estimate-size-and-temporal-trends-of-seabird-populations(50f91926-a1ca-41f2-9d05-e80ef6ff5453).html https://doi.org/10.1046/j.1365-2664.2003.00802.x http://www.scopus.com/inward/record.url?scp=0012954678&partnerID=8YFLogxK eng eng https://research-portal.st-andrews.ac.uk/en/researchoutput/validating-the-use-of-generalized-additive-models-and-atsea-surveys-to-estimate-size-and-temporal-trends-of-seabird-populations(50f91926-a1ca-41f2-9d05-e80ef6ff5453).html info:eu-repo/semantics/restrictedAccess Clarke , ED , Spear , LB , McCracken , ML , Marques , FFC , Borchers , D L , Buckland , S T & Ainley , DG 2003 , ' Validating the use of generalized additive models and at-sea surveys to estimate size and temporal trends of seabird populations ' , Journal of Applied Ecology , vol. 40 , pp. 278-292 . https://doi.org/10.1046/j.1365-2664.2003.00802.x abundance estimates common guillemot model-based estimation vector correction waved albatross western gull EGG-PRODUCTION METHOD SPATIAL-DISTRIBUTION CALIFORNIA CURRENT COUNTING SEABIRDS TROPICAL PACIFIC SOUTHERN-OCEAN FARMLAND BIRDS ABUNDANCE FISHERY AGE article 2003 ftunstandrewcris https://doi.org/10.1046/j.1365-2664.2003.00802.x 2024-06-13T00:12:23Z 1. The population size of seabirds is often difficult to estimate from surveys at breeding colonies because of factors such as burrow nesting and nocturnal breeding. The reliability of alternative surveys conducted at sea has not previously been validated. Sample-based estimates from at-sea surveys could be biased and have poor precision due to non-random survey design and the uneven distribution of seabirds at sea. 2. We conducted at-sea surveys of western gulls Larus occidentalis and common guillemots Uria aalge of the Farallon Islands, California, USA, and waved albatrosses Phoebastria irrorata of the Galapagos. The observed counts were modelled using generalized additive models (GAMs), with a correction factor for bird movement relative to the ship included in an offset. The models were used to produce estimates of the size of the seabird populations at sea, which were compared with independent colony-based estimates, adjusted to account for the number of non-breeders. 3. Gull and guillemot populations were estimated separately for each of 10 survey years. Temporal trends were estimated by smoothing through the annual values. The albatross data from 7 survey years were pooled to obtain a single estimate of average population size. 4. The coefficients of variation (CVs) of the annual estimates were approximately 10%, 15-20% and 15-45% prior to smoothing for the albatross, gull and guillemot, respectively. The CVs of the smoothed estimates were about 10% for the gull and 15% for the guillemot. These represent substantial improvements in precision over previous sample-based estimates from at-sea surveys. 5. The colony-based estimates usually lay within the 95% confidence intervals (CIs) of both the annual and smoothed sea-based estimates, showing that the sea-based methods worked well. 6. Synthesis and applications. We conclude that GAMs of at-sea seabird survey data, collected under suitable protocols and corrected for bird movement, can accurately estimate population size. Given sufficient demographic ... Article in Journal/Newspaper common guillemot Southern Ocean Uria aalge uria University of St Andrews: Research Portal Galapagos Pacific Southern Ocean Journal of Applied Ecology 40 2 278 292
institution Open Polar
collection University of St Andrews: Research Portal
op_collection_id ftunstandrewcris
language English
topic abundance estimates
common guillemot
model-based estimation
vector correction
waved albatross
western gull
EGG-PRODUCTION METHOD
SPATIAL-DISTRIBUTION
CALIFORNIA CURRENT
COUNTING SEABIRDS
TROPICAL PACIFIC
SOUTHERN-OCEAN
FARMLAND BIRDS
ABUNDANCE
FISHERY
AGE
spellingShingle abundance estimates
common guillemot
model-based estimation
vector correction
waved albatross
western gull
EGG-PRODUCTION METHOD
SPATIAL-DISTRIBUTION
CALIFORNIA CURRENT
COUNTING SEABIRDS
TROPICAL PACIFIC
SOUTHERN-OCEAN
FARMLAND BIRDS
ABUNDANCE
FISHERY
AGE
Clarke, ED
Spear, LB
McCracken, ML
Marques, FFC
Borchers, David Louis
Buckland, Stephen Terrence
Ainley, DG
Validating the use of generalized additive models and at-sea surveys to estimate size and temporal trends of seabird populations
topic_facet abundance estimates
common guillemot
model-based estimation
vector correction
waved albatross
western gull
EGG-PRODUCTION METHOD
SPATIAL-DISTRIBUTION
CALIFORNIA CURRENT
COUNTING SEABIRDS
TROPICAL PACIFIC
SOUTHERN-OCEAN
FARMLAND BIRDS
ABUNDANCE
FISHERY
AGE
description 1. The population size of seabirds is often difficult to estimate from surveys at breeding colonies because of factors such as burrow nesting and nocturnal breeding. The reliability of alternative surveys conducted at sea has not previously been validated. Sample-based estimates from at-sea surveys could be biased and have poor precision due to non-random survey design and the uneven distribution of seabirds at sea. 2. We conducted at-sea surveys of western gulls Larus occidentalis and common guillemots Uria aalge of the Farallon Islands, California, USA, and waved albatrosses Phoebastria irrorata of the Galapagos. The observed counts were modelled using generalized additive models (GAMs), with a correction factor for bird movement relative to the ship included in an offset. The models were used to produce estimates of the size of the seabird populations at sea, which were compared with independent colony-based estimates, adjusted to account for the number of non-breeders. 3. Gull and guillemot populations were estimated separately for each of 10 survey years. Temporal trends were estimated by smoothing through the annual values. The albatross data from 7 survey years were pooled to obtain a single estimate of average population size. 4. The coefficients of variation (CVs) of the annual estimates were approximately 10%, 15-20% and 15-45% prior to smoothing for the albatross, gull and guillemot, respectively. The CVs of the smoothed estimates were about 10% for the gull and 15% for the guillemot. These represent substantial improvements in precision over previous sample-based estimates from at-sea surveys. 5. The colony-based estimates usually lay within the 95% confidence intervals (CIs) of both the annual and smoothed sea-based estimates, showing that the sea-based methods worked well. 6. Synthesis and applications. We conclude that GAMs of at-sea seabird survey data, collected under suitable protocols and corrected for bird movement, can accurately estimate population size. Given sufficient demographic ...
format Article in Journal/Newspaper
author Clarke, ED
Spear, LB
McCracken, ML
Marques, FFC
Borchers, David Louis
Buckland, Stephen Terrence
Ainley, DG
author_facet Clarke, ED
Spear, LB
McCracken, ML
Marques, FFC
Borchers, David Louis
Buckland, Stephen Terrence
Ainley, DG
author_sort Clarke, ED
title Validating the use of generalized additive models and at-sea surveys to estimate size and temporal trends of seabird populations
title_short Validating the use of generalized additive models and at-sea surveys to estimate size and temporal trends of seabird populations
title_full Validating the use of generalized additive models and at-sea surveys to estimate size and temporal trends of seabird populations
title_fullStr Validating the use of generalized additive models and at-sea surveys to estimate size and temporal trends of seabird populations
title_full_unstemmed Validating the use of generalized additive models and at-sea surveys to estimate size and temporal trends of seabird populations
title_sort validating the use of generalized additive models and at-sea surveys to estimate size and temporal trends of seabird populations
publishDate 2003
url https://research-portal.st-andrews.ac.uk/en/researchoutput/validating-the-use-of-generalized-additive-models-and-atsea-surveys-to-estimate-size-and-temporal-trends-of-seabird-populations(50f91926-a1ca-41f2-9d05-e80ef6ff5453).html
https://doi.org/10.1046/j.1365-2664.2003.00802.x
http://www.scopus.com/inward/record.url?scp=0012954678&partnerID=8YFLogxK
geographic Galapagos
Pacific
Southern Ocean
geographic_facet Galapagos
Pacific
Southern Ocean
genre common guillemot
Southern Ocean
Uria aalge
uria
genre_facet common guillemot
Southern Ocean
Uria aalge
uria
op_source Clarke , ED , Spear , LB , McCracken , ML , Marques , FFC , Borchers , D L , Buckland , S T & Ainley , DG 2003 , ' Validating the use of generalized additive models and at-sea surveys to estimate size and temporal trends of seabird populations ' , Journal of Applied Ecology , vol. 40 , pp. 278-292 . https://doi.org/10.1046/j.1365-2664.2003.00802.x
op_relation https://research-portal.st-andrews.ac.uk/en/researchoutput/validating-the-use-of-generalized-additive-models-and-atsea-surveys-to-estimate-size-and-temporal-trends-of-seabird-populations(50f91926-a1ca-41f2-9d05-e80ef6ff5453).html
op_rights info:eu-repo/semantics/restrictedAccess
op_doi https://doi.org/10.1046/j.1365-2664.2003.00802.x
container_title Journal of Applied Ecology
container_volume 40
container_issue 2
container_start_page 278
op_container_end_page 292
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