Extremophile hypolithic communities in the Vestfold Hills, East Antarctica

The Vestfold Hills are a 400 km2, isolated ice-free oasis in eastern Antarctica featuring large areas with translucent quartz rocks that provide habitat for hypolithic microbial communities underneath. We used high-throughput DNA sequencing of 16S and 18S ribosomal RNA amplicons to characterize bact...

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Published in:Antarctic Science
Main Authors: Clarke, Laurence J., Raes, Eric J., Travers, Toby, Virtue, Patti, Bergstrom, Dana M.
Format: Text
Language:unknown
Published: Research Online 2024
Subjects:
Online Access:https://ro.uow.edu.au/test2021/11511
https://doi.org/10.1017/S0954102023000408
id ftunivwollongong:oai:ro.uow.edu.au:test2021-17058
record_format openpolar
spelling ftunivwollongong:oai:ro.uow.edu.au:test2021-17058 2024-06-02T07:56:16+00:00 Extremophile hypolithic communities in the Vestfold Hills, East Antarctica Clarke, Laurence J. Raes, Eric J. Travers, Toby Virtue, Patti Bergstrom, Dana M. 2024-01-01T08:00:00Z https://ro.uow.edu.au/test2021/11511 https://doi.org/10.1017/S0954102023000408 unknown Research Online https://ro.uow.edu.au/test2021/11511 doi:10.1017/S0954102023000408 https://doi.org/10.1017/S0954102023000408 Scopus Harvesting Series 16S/18S ribosomal RNA gene bacteria Cyanobacteria dispersal limitation eukaryote high-throughput DNA sequencing text 2024 ftunivwollongong https://doi.org/10.1017/S0954102023000408 2024-05-07T23:35:17Z The Vestfold Hills are a 400 km2, isolated ice-free oasis in eastern Antarctica featuring large areas with translucent quartz rocks that provide habitat for hypolithic microbial communities underneath. We used high-throughput DNA sequencing of 16S and 18S ribosomal RNA amplicons to characterize bacterial and eukaryotic hypolithic communities across the Vestfold Hills. We found high-level, local heterogeneity in community structure consistent with limited dispersal between hypoliths. Hypolithic communities were dominated by heterotrophic Bacteroidetes (mean bacterial relative read abundance: 56%) as well as Cyanobacteria (35%), with the eukaryote component often dominated by Chlorophyta (43%). Small but significant proportions of the variation in microbial community composition and function were explained by soil salinity (5-7%) and water availability (8-11%), with distinct taxa associated with different salinities and water availabilities. Furthermore, many inferred bacterial metabolic pathways were enriched in hypolithic communities from either dry or high-salinity sites. Vestfold Hills hypolithic habitats are likely to be local refuges for bacterial and eukaryotic diversity. Gradients in soil salinity and water availability across the Vestfold Hills, in addition to the number and diversity of lake types and fjords as potential source populations, may contribute to the observed variation in the extremophile, hypolithic microbial community composition. Text Antarc* Antarctica East Antarctica University of Wollongong, Australia: Research Online East Antarctica Vestfold Vestfold Hills Antarctic Science 36 1 20 36
institution Open Polar
collection University of Wollongong, Australia: Research Online
op_collection_id ftunivwollongong
language unknown
topic 16S/18S ribosomal RNA gene
bacteria
Cyanobacteria
dispersal limitation
eukaryote
high-throughput DNA sequencing
spellingShingle 16S/18S ribosomal RNA gene
bacteria
Cyanobacteria
dispersal limitation
eukaryote
high-throughput DNA sequencing
Clarke, Laurence J.
Raes, Eric J.
Travers, Toby
Virtue, Patti
Bergstrom, Dana M.
Extremophile hypolithic communities in the Vestfold Hills, East Antarctica
topic_facet 16S/18S ribosomal RNA gene
bacteria
Cyanobacteria
dispersal limitation
eukaryote
high-throughput DNA sequencing
description The Vestfold Hills are a 400 km2, isolated ice-free oasis in eastern Antarctica featuring large areas with translucent quartz rocks that provide habitat for hypolithic microbial communities underneath. We used high-throughput DNA sequencing of 16S and 18S ribosomal RNA amplicons to characterize bacterial and eukaryotic hypolithic communities across the Vestfold Hills. We found high-level, local heterogeneity in community structure consistent with limited dispersal between hypoliths. Hypolithic communities were dominated by heterotrophic Bacteroidetes (mean bacterial relative read abundance: 56%) as well as Cyanobacteria (35%), with the eukaryote component often dominated by Chlorophyta (43%). Small but significant proportions of the variation in microbial community composition and function were explained by soil salinity (5-7%) and water availability (8-11%), with distinct taxa associated with different salinities and water availabilities. Furthermore, many inferred bacterial metabolic pathways were enriched in hypolithic communities from either dry or high-salinity sites. Vestfold Hills hypolithic habitats are likely to be local refuges for bacterial and eukaryotic diversity. Gradients in soil salinity and water availability across the Vestfold Hills, in addition to the number and diversity of lake types and fjords as potential source populations, may contribute to the observed variation in the extremophile, hypolithic microbial community composition.
format Text
author Clarke, Laurence J.
Raes, Eric J.
Travers, Toby
Virtue, Patti
Bergstrom, Dana M.
author_facet Clarke, Laurence J.
Raes, Eric J.
Travers, Toby
Virtue, Patti
Bergstrom, Dana M.
author_sort Clarke, Laurence J.
title Extremophile hypolithic communities in the Vestfold Hills, East Antarctica
title_short Extremophile hypolithic communities in the Vestfold Hills, East Antarctica
title_full Extremophile hypolithic communities in the Vestfold Hills, East Antarctica
title_fullStr Extremophile hypolithic communities in the Vestfold Hills, East Antarctica
title_full_unstemmed Extremophile hypolithic communities in the Vestfold Hills, East Antarctica
title_sort extremophile hypolithic communities in the vestfold hills, east antarctica
publisher Research Online
publishDate 2024
url https://ro.uow.edu.au/test2021/11511
https://doi.org/10.1017/S0954102023000408
geographic East Antarctica
Vestfold
Vestfold Hills
geographic_facet East Antarctica
Vestfold
Vestfold Hills
genre Antarc*
Antarctica
East Antarctica
genre_facet Antarc*
Antarctica
East Antarctica
op_source Scopus Harvesting Series
op_relation https://ro.uow.edu.au/test2021/11511
doi:10.1017/S0954102023000408
https://doi.org/10.1017/S0954102023000408
op_doi https://doi.org/10.1017/S0954102023000408
container_title Antarctic Science
container_volume 36
container_issue 1
container_start_page 20
op_container_end_page 36
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