Development of a machine learning detector for North Atlantic humpback whale song
The study of humpback whale song using passive acoustic monitoring devices requires bioacousticians to manually review hours of audio recordings to annotate the signals. To vastly reduce the time of manual annotation throughautomation, a machine learning model was developed. Convolutional neural net...
Published in: | The Journal of the Acoustical Society of America |
---|---|
Main Authors: | , , , , , , , , |
Format: | Article in Journal/Newspaper |
Language: | English |
Published: |
2024
|
Subjects: | |
Online Access: | https://research.wur.nl/en/publications/development-of-a-machine-learning-detector-for-north-atlantic-hum https://doi.org/10.1121/10.0025275 |
id |
ftunivwagenin:oai:library.wur.nl:wurpubs/628018 |
---|---|
record_format |
openpolar |
spelling |
ftunivwagenin:oai:library.wur.nl:wurpubs/628018 2024-04-28T08:23:21+00:00 Development of a machine learning detector for North Atlantic humpback whale song Kather, Vincent Seipel, Fabian Berges, Benoit Davis, Genevieve Gibson, Catherine Harvey, Matt Henry, Lea-Anne Stevenson, Andrew Risch, Denise 2024 application/pdf https://research.wur.nl/en/publications/development-of-a-machine-learning-detector-for-north-atlantic-hum https://doi.org/10.1121/10.0025275 en eng https://edepot.wur.nl/652747 https://research.wur.nl/en/publications/development-of-a-machine-learning-detector-for-north-atlantic-hum doi:10.1121/10.0025275 https://creativecommons.org/licenses/by/4.0/ Wageningen University & Research Journal of the Acoustical Society of America 155 (2024) 3 ISSN: 0001-4966 Life Science Article/Letter to editor 2024 ftunivwagenin https://doi.org/10.1121/10.0025275 2024-04-09T23:33:25Z The study of humpback whale song using passive acoustic monitoring devices requires bioacousticians to manually review hours of audio recordings to annotate the signals. To vastly reduce the time of manual annotation throughautomation, a machine learning model was developed. Convolutional neural networks have made major advances in the previous decade, leading to a wide range of applications, including the detection of frequency modulatedvocalizations by cetaceans. A large dataset of over 60 000 audio segments of 4 s length is collected from the North Atlantic and used to fine-tune an existing model for humpback whale song detection in the North Pacific (see Allen,Harvey, Harrell, Jansen, Merkens, Wall, Cattiau, and Oleson (2021). Front. Mar. Sci. 8, 607321). Furthermore, different data augmentation techniques (time-shift, noise augmentation, and masking) are used to artificially increasethe variability within the training set. Retraining and augmentation yield F-score values of 0.88 on context window basis and 0.89 on hourly basis with false positive rates of 0.05 on context window basis and 0.01 on hourly basis. Ifnecessary, usage and retraining of the existing model is made convenient by a framework (AcoDet, acoustic detector) built during this project. Combining the tools provided by this framework could save researchers hours of manualannotation time and, thus, accelerate their research. Article in Journal/Newspaper Humpback Whale North Atlantic Wageningen UR (University & Research Centre): Digital Library The Journal of the Acoustical Society of America 155 3 2050 2064 |
institution |
Open Polar |
collection |
Wageningen UR (University & Research Centre): Digital Library |
op_collection_id |
ftunivwagenin |
language |
English |
topic |
Life Science |
spellingShingle |
Life Science Kather, Vincent Seipel, Fabian Berges, Benoit Davis, Genevieve Gibson, Catherine Harvey, Matt Henry, Lea-Anne Stevenson, Andrew Risch, Denise Development of a machine learning detector for North Atlantic humpback whale song |
topic_facet |
Life Science |
description |
The study of humpback whale song using passive acoustic monitoring devices requires bioacousticians to manually review hours of audio recordings to annotate the signals. To vastly reduce the time of manual annotation throughautomation, a machine learning model was developed. Convolutional neural networks have made major advances in the previous decade, leading to a wide range of applications, including the detection of frequency modulatedvocalizations by cetaceans. A large dataset of over 60 000 audio segments of 4 s length is collected from the North Atlantic and used to fine-tune an existing model for humpback whale song detection in the North Pacific (see Allen,Harvey, Harrell, Jansen, Merkens, Wall, Cattiau, and Oleson (2021). Front. Mar. Sci. 8, 607321). Furthermore, different data augmentation techniques (time-shift, noise augmentation, and masking) are used to artificially increasethe variability within the training set. Retraining and augmentation yield F-score values of 0.88 on context window basis and 0.89 on hourly basis with false positive rates of 0.05 on context window basis and 0.01 on hourly basis. Ifnecessary, usage and retraining of the existing model is made convenient by a framework (AcoDet, acoustic detector) built during this project. Combining the tools provided by this framework could save researchers hours of manualannotation time and, thus, accelerate their research. |
format |
Article in Journal/Newspaper |
author |
Kather, Vincent Seipel, Fabian Berges, Benoit Davis, Genevieve Gibson, Catherine Harvey, Matt Henry, Lea-Anne Stevenson, Andrew Risch, Denise |
author_facet |
Kather, Vincent Seipel, Fabian Berges, Benoit Davis, Genevieve Gibson, Catherine Harvey, Matt Henry, Lea-Anne Stevenson, Andrew Risch, Denise |
author_sort |
Kather, Vincent |
title |
Development of a machine learning detector for North Atlantic humpback whale song |
title_short |
Development of a machine learning detector for North Atlantic humpback whale song |
title_full |
Development of a machine learning detector for North Atlantic humpback whale song |
title_fullStr |
Development of a machine learning detector for North Atlantic humpback whale song |
title_full_unstemmed |
Development of a machine learning detector for North Atlantic humpback whale song |
title_sort |
development of a machine learning detector for north atlantic humpback whale song |
publishDate |
2024 |
url |
https://research.wur.nl/en/publications/development-of-a-machine-learning-detector-for-north-atlantic-hum https://doi.org/10.1121/10.0025275 |
genre |
Humpback Whale North Atlantic |
genre_facet |
Humpback Whale North Atlantic |
op_source |
Journal of the Acoustical Society of America 155 (2024) 3 ISSN: 0001-4966 |
op_relation |
https://edepot.wur.nl/652747 https://research.wur.nl/en/publications/development-of-a-machine-learning-detector-for-north-atlantic-hum doi:10.1121/10.0025275 |
op_rights |
https://creativecommons.org/licenses/by/4.0/ Wageningen University & Research |
op_doi |
https://doi.org/10.1121/10.0025275 |
container_title |
The Journal of the Acoustical Society of America |
container_volume |
155 |
container_issue |
3 |
container_start_page |
2050 |
op_container_end_page |
2064 |
_version_ |
1797584355648864256 |