Phylogeny and lipid profiles of snow-algae isolated from Norwegian red-snow microbiomes

Snow algae blooms often form green or red coloured patches in melting alpine and polar snowfields worldwide, yet little is known about their biology, biogeography, and species diversity. We investigated eight isolates collected from red snow in northern Norway, using a combination of morphology, 18S...

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Published in:FEMS Microbiology Ecology
Main Authors: Suzuki, Hirono, Dtain, Alexandre, Park, Youngjin, Viswanath, Kiron, Wijffels, Ren H., Leborgne-Castel, Nathalie, Procházková, Lenka, Hulatt, Chris J.
Format: Article in Journal/Newspaper
Language:English
Published: 2023
Subjects:
Online Access:https://research.wur.nl/en/publications/phylogeny-and-lipid-profiles-of-snow-algae-isolated-from-norwegia
https://doi.org/10.1093/femsec/fiad057
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record_format openpolar
spelling ftunivwagenin:oai:library.wur.nl:wurpubs/620163 2024-04-28T08:32:29+00:00 Phylogeny and lipid profiles of snow-algae isolated from Norwegian red-snow microbiomes Suzuki, Hirono Dtain, Alexandre Park, Youngjin Viswanath, Kiron Wijffels, Ren H. Leborgne-Castel, Nathalie Procházková, Lenka Hulatt, Chris J. 2023 application/pdf https://research.wur.nl/en/publications/phylogeny-and-lipid-profiles-of-snow-algae-isolated-from-norwegia https://doi.org/10.1093/femsec/fiad057 en eng https://edepot.wur.nl/640322 https://research.wur.nl/en/publications/phylogeny-and-lipid-profiles-of-snow-algae-isolated-from-norwegia doi:10.1093/femsec/fiad057 https://creativecommons.org/licenses/by/4.0/ Wageningen University & Research FEMS Microbiology Ecology 99 (2023) 6 ISSN: 0168-6496 18S rRNA ITS2 rRNA fatty acids imaging flow cytometry microalgae phylogeny Article/Letter to editor 2023 ftunivwagenin https://doi.org/10.1093/femsec/fiad057 2024-04-03T14:26:15Z Snow algae blooms often form green or red coloured patches in melting alpine and polar snowfields worldwide, yet little is known about their biology, biogeography, and species diversity. We investigated eight isolates collected from red snow in northern Norway, using a combination of morphology, 18S rRNA gene and internal transcribed spacer 2 (ITS2) genetic markers. Phylogenetic and ITS2 rRNA secondary structure analyses assigned six isolates to the species Raphidonema nivale, Deuterostichococcus epilithicus, Chloromonas reticulata, and Xanthonema bristolianum. Two novel isolates belonging to the family Stichococcaceae (ARK-S05-19) and the genus Chloromonas (ARK-S08-19) were identified as potentially new species. In laboratory cultivation, differences in the growth rate and fatty acid profiles were observed between the strains. Chlorophyta were characterized by abundant C18:3n-3 fatty-acids with increases in C18:1n-9 in the stationary phase, whilst Xanthonema (Ochrophyta) was characterized by a large proportion of C20:5n-3, with increases in C16:1n-7 in the stationary phase. In a further experiment, lipid droplet formation was studied in C. reticulata at the single-cell level using imaging flow cytometry. Our study establishes new cultures of snow algae, reveals novel data on their biodiversity and biogeography, and provides an initial characterization of physiological traits that shape natural communities and their ecophysiological properties. Article in Journal/Newspaper Northern Norway Wageningen UR (University & Research Centre): Digital Library FEMS Microbiology Ecology 99 6
institution Open Polar
collection Wageningen UR (University & Research Centre): Digital Library
op_collection_id ftunivwagenin
language English
topic 18S rRNA
ITS2 rRNA
fatty acids
imaging flow cytometry
microalgae
phylogeny
spellingShingle 18S rRNA
ITS2 rRNA
fatty acids
imaging flow cytometry
microalgae
phylogeny
Suzuki, Hirono
Dtain, Alexandre
Park, Youngjin
Viswanath, Kiron
Wijffels, Ren H.
Leborgne-Castel, Nathalie
Procházková, Lenka
Hulatt, Chris J.
Phylogeny and lipid profiles of snow-algae isolated from Norwegian red-snow microbiomes
topic_facet 18S rRNA
ITS2 rRNA
fatty acids
imaging flow cytometry
microalgae
phylogeny
description Snow algae blooms often form green or red coloured patches in melting alpine and polar snowfields worldwide, yet little is known about their biology, biogeography, and species diversity. We investigated eight isolates collected from red snow in northern Norway, using a combination of morphology, 18S rRNA gene and internal transcribed spacer 2 (ITS2) genetic markers. Phylogenetic and ITS2 rRNA secondary structure analyses assigned six isolates to the species Raphidonema nivale, Deuterostichococcus epilithicus, Chloromonas reticulata, and Xanthonema bristolianum. Two novel isolates belonging to the family Stichococcaceae (ARK-S05-19) and the genus Chloromonas (ARK-S08-19) were identified as potentially new species. In laboratory cultivation, differences in the growth rate and fatty acid profiles were observed between the strains. Chlorophyta were characterized by abundant C18:3n-3 fatty-acids with increases in C18:1n-9 in the stationary phase, whilst Xanthonema (Ochrophyta) was characterized by a large proportion of C20:5n-3, with increases in C16:1n-7 in the stationary phase. In a further experiment, lipid droplet formation was studied in C. reticulata at the single-cell level using imaging flow cytometry. Our study establishes new cultures of snow algae, reveals novel data on their biodiversity and biogeography, and provides an initial characterization of physiological traits that shape natural communities and their ecophysiological properties.
format Article in Journal/Newspaper
author Suzuki, Hirono
Dtain, Alexandre
Park, Youngjin
Viswanath, Kiron
Wijffels, Ren H.
Leborgne-Castel, Nathalie
Procházková, Lenka
Hulatt, Chris J.
author_facet Suzuki, Hirono
Dtain, Alexandre
Park, Youngjin
Viswanath, Kiron
Wijffels, Ren H.
Leborgne-Castel, Nathalie
Procházková, Lenka
Hulatt, Chris J.
author_sort Suzuki, Hirono
title Phylogeny and lipid profiles of snow-algae isolated from Norwegian red-snow microbiomes
title_short Phylogeny and lipid profiles of snow-algae isolated from Norwegian red-snow microbiomes
title_full Phylogeny and lipid profiles of snow-algae isolated from Norwegian red-snow microbiomes
title_fullStr Phylogeny and lipid profiles of snow-algae isolated from Norwegian red-snow microbiomes
title_full_unstemmed Phylogeny and lipid profiles of snow-algae isolated from Norwegian red-snow microbiomes
title_sort phylogeny and lipid profiles of snow-algae isolated from norwegian red-snow microbiomes
publishDate 2023
url https://research.wur.nl/en/publications/phylogeny-and-lipid-profiles-of-snow-algae-isolated-from-norwegia
https://doi.org/10.1093/femsec/fiad057
genre Northern Norway
genre_facet Northern Norway
op_source FEMS Microbiology Ecology 99 (2023) 6
ISSN: 0168-6496
op_relation https://edepot.wur.nl/640322
https://research.wur.nl/en/publications/phylogeny-and-lipid-profiles-of-snow-algae-isolated-from-norwegia
doi:10.1093/femsec/fiad057
op_rights https://creativecommons.org/licenses/by/4.0/
Wageningen University & Research
op_doi https://doi.org/10.1093/femsec/fiad057
container_title FEMS Microbiology Ecology
container_volume 99
container_issue 6
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