Microbiota composition and metabolomic profiles of the deep sea sponges Weberella bursa, Stryphnus fortis and Geodia barretti along a depth gradient

In this study we assessed prokaryotic community and metabolite profiles of the three deep sea sponges: W. bursa, S. fortis and G. barretti collected at the Davis Strait at depth range of 200 - 1400 m. Microbial composition was investigated using 16S rRNA gene amplicon sequencing by applying the Illu...

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Main Authors: Steffen, Karin, Indraningrat, Anak, Erngren, Ida, Haglöf, Jakob, Becking, Lisa, Smidt, Hauke, Yashayaev, Igor, Kenchington, Ellen, Pettersson, Curt, Cárdenas, Paco, Sipkema, Detmer
Format: Other/Unknown Material
Language:unknown
Published: Wageningen University 2018
Subjects:
Online Access:https://research.wur.nl/en/datasets/microbiota-composition-and-metabolomic-profiles-of-the-deep-sea-s
id ftunivwagenin:oai:library.wur.nl:wurpubs/612074
record_format openpolar
spelling ftunivwagenin:oai:library.wur.nl:wurpubs/612074 2024-02-04T09:59:59+01:00 Microbiota composition and metabolomic profiles of the deep sea sponges Weberella bursa, Stryphnus fortis and Geodia barretti along a depth gradient Steffen, Karin Indraningrat, Anak Erngren, Ida Haglöf, Jakob Becking, Lisa Smidt, Hauke Yashayaev, Igor Kenchington, Ellen Pettersson, Curt Cárdenas, Paco Sipkema, Detmer 2018 text/html https://research.wur.nl/en/datasets/microbiota-composition-and-metabolomic-profiles-of-the-deep-sea-s unknown Wageningen University info:eu-repo/grantAgreement/EC/H2020/679849 https://edepot.wur.nl/589518 https://research.wur.nl/en/datasets/microbiota-composition-and-metabolomic-profiles-of-the-deep-sea-s info:eu-repo/semantics/openAccess Wageningen University & Research Geodia barretti Raw sequence reads Stryphnus fortis Weberella bursa deep sea sponges info:eu-repo/semantics/other info:eu-repo/semantics/publishedVersion 2018 ftunivwagenin 2024-01-10T23:16:58Z In this study we assessed prokaryotic community and metabolite profiles of the three deep sea sponges: W. bursa, S. fortis and G. barretti collected at the Davis Strait at depth range of 200 - 1400 m. Microbial composition was investigated using 16S rRNA gene amplicon sequencing by applying the Illumina MiSeq technology and metabolomic profiles were screened using UPLC-QTOF mass spectrometry. The overall aim of this study is to investigate to what extend depth influences microbial composition and metabolite profiles of the deep sea sponges. Other/Unknown Material Davis Strait Wageningen UR (University & Research Centre): Digital Library
institution Open Polar
collection Wageningen UR (University & Research Centre): Digital Library
op_collection_id ftunivwagenin
language unknown
topic Geodia barretti
Raw sequence reads
Stryphnus fortis
Weberella bursa
deep sea sponges
spellingShingle Geodia barretti
Raw sequence reads
Stryphnus fortis
Weberella bursa
deep sea sponges
Steffen, Karin
Indraningrat, Anak
Erngren, Ida
Haglöf, Jakob
Becking, Lisa
Smidt, Hauke
Yashayaev, Igor
Kenchington, Ellen
Pettersson, Curt
Cárdenas, Paco
Sipkema, Detmer
Microbiota composition and metabolomic profiles of the deep sea sponges Weberella bursa, Stryphnus fortis and Geodia barretti along a depth gradient
topic_facet Geodia barretti
Raw sequence reads
Stryphnus fortis
Weberella bursa
deep sea sponges
description In this study we assessed prokaryotic community and metabolite profiles of the three deep sea sponges: W. bursa, S. fortis and G. barretti collected at the Davis Strait at depth range of 200 - 1400 m. Microbial composition was investigated using 16S rRNA gene amplicon sequencing by applying the Illumina MiSeq technology and metabolomic profiles were screened using UPLC-QTOF mass spectrometry. The overall aim of this study is to investigate to what extend depth influences microbial composition and metabolite profiles of the deep sea sponges.
format Other/Unknown Material
author Steffen, Karin
Indraningrat, Anak
Erngren, Ida
Haglöf, Jakob
Becking, Lisa
Smidt, Hauke
Yashayaev, Igor
Kenchington, Ellen
Pettersson, Curt
Cárdenas, Paco
Sipkema, Detmer
author_facet Steffen, Karin
Indraningrat, Anak
Erngren, Ida
Haglöf, Jakob
Becking, Lisa
Smidt, Hauke
Yashayaev, Igor
Kenchington, Ellen
Pettersson, Curt
Cárdenas, Paco
Sipkema, Detmer
author_sort Steffen, Karin
title Microbiota composition and metabolomic profiles of the deep sea sponges Weberella bursa, Stryphnus fortis and Geodia barretti along a depth gradient
title_short Microbiota composition and metabolomic profiles of the deep sea sponges Weberella bursa, Stryphnus fortis and Geodia barretti along a depth gradient
title_full Microbiota composition and metabolomic profiles of the deep sea sponges Weberella bursa, Stryphnus fortis and Geodia barretti along a depth gradient
title_fullStr Microbiota composition and metabolomic profiles of the deep sea sponges Weberella bursa, Stryphnus fortis and Geodia barretti along a depth gradient
title_full_unstemmed Microbiota composition and metabolomic profiles of the deep sea sponges Weberella bursa, Stryphnus fortis and Geodia barretti along a depth gradient
title_sort microbiota composition and metabolomic profiles of the deep sea sponges weberella bursa, stryphnus fortis and geodia barretti along a depth gradient
publisher Wageningen University
publishDate 2018
url https://research.wur.nl/en/datasets/microbiota-composition-and-metabolomic-profiles-of-the-deep-sea-s
genre Davis Strait
genre_facet Davis Strait
op_relation info:eu-repo/grantAgreement/EC/H2020/679849
https://edepot.wur.nl/589518
https://research.wur.nl/en/datasets/microbiota-composition-and-metabolomic-profiles-of-the-deep-sea-s
op_rights info:eu-repo/semantics/openAccess
Wageningen University & Research
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