Phototrophic microbes form endolithic biofilms in ikaite tufa columns (SW Greenland)

© 2017 Society for Applied Microbiology and John Wiley & Sons Ltd Marine tufa-columns, formed by the hydrated carbonate mineral ikaite, present a unique alkaline microbial habitat only found in Ikka Fjord (SW-Greenland). The outermost parts of the ikaite columns exhibit a multitude of physico-ch...

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Main Authors: Trampe, E, Castenholz, RW, Larsen, JEN, Kühl, M
Format: Article in Journal/Newspaper
Language:unknown
Published: 2017
Subjects:
RNA
16S
Online Access:http://hdl.handle.net/10453/125014
id ftunivtsydney:oai:opus.lib.uts.edu.au:10453/125014
record_format openpolar
spelling ftunivtsydney:oai:opus.lib.uts.edu.au:10453/125014 2023-05-15T16:27:18+02:00 Phototrophic microbes form endolithic biofilms in ikaite tufa columns (SW Greenland) Trampe, E Castenholz, RW Larsen, JEN Kühl, M 2017-11-01 application/pdf http://hdl.handle.net/10453/125014 unknown Environmental Microbiology 10.1111/1462-2920.13940 Environmental Microbiology, 2017, 19 (11), pp. 4754 - 4770 1462-2912 http://hdl.handle.net/10453/125014 Microbiology Diatoms Biofilms Cyanobacteria Calcium Carbonate RNA Ribosomal 16S Ecosystem Seawater Photosynthesis Greenland Estuaries Journal Article 2017 ftunivtsydney 2022-03-13T13:44:16Z © 2017 Society for Applied Microbiology and John Wiley & Sons Ltd Marine tufa-columns, formed by the hydrated carbonate mineral ikaite, present a unique alkaline microbial habitat only found in Ikka Fjord (SW-Greenland). The outermost parts of the ikaite columns exhibit a multitude of physico-chemical gradients, and the porous ikaite is colonized by endolithic phototrophic biofilms serving as a substrate for grazing epifauna, where scraping by sea urchins affects overall column-topography. We present a detailed study of the optical microenvironment, spatial organization, and photosynthetic activity of endolithic phototrophs within the porous ikaite crystal matrix. Cyanobacteria and diatoms formed distinctly coloured zones and were closely associated with ikaite-crystals via excretion of exopolymers. Scalar-irradiance measurements showed strong attenuation of visible light (400–700 nm), where only ∼1% of incident irradiance remained at 20 mm depth. Transmission spectra showed in vivo absorption signatures of diatom and cyanobacterial photopigments, which were confirmed by HPLC-analysis. Variable-chlorophyll-fluorescence-imaging showed active photosynthesis with high-light acclimation in the outer diatom layer, and low-light acclimation in the underlying cyanobacterial part. Phototrophs in ikaite thus thrive in polymer-bound endolithic biofilms in a complex gradient microhabitat experiencing constant slow percolation of highly alkaline phosphate-enriched spring water mixing with cold seawater at the tufa-column-apex. We discuss the potential role of these biofilms in ikaite column formation. Article in Journal/Newspaper Greenland University of Technology Sydney: OPUS - Open Publications of UTS Scholars Greenland Ikka ENVELOPE(-48.100,-48.100,61.150,61.150)
institution Open Polar
collection University of Technology Sydney: OPUS - Open Publications of UTS Scholars
op_collection_id ftunivtsydney
language unknown
topic Microbiology
Diatoms
Biofilms
Cyanobacteria
Calcium Carbonate
RNA
Ribosomal
16S
Ecosystem
Seawater
Photosynthesis
Greenland
Estuaries
spellingShingle Microbiology
Diatoms
Biofilms
Cyanobacteria
Calcium Carbonate
RNA
Ribosomal
16S
Ecosystem
Seawater
Photosynthesis
Greenland
Estuaries
Trampe, E
Castenholz, RW
Larsen, JEN
Kühl, M
Phototrophic microbes form endolithic biofilms in ikaite tufa columns (SW Greenland)
topic_facet Microbiology
Diatoms
Biofilms
Cyanobacteria
Calcium Carbonate
RNA
Ribosomal
16S
Ecosystem
Seawater
Photosynthesis
Greenland
Estuaries
description © 2017 Society for Applied Microbiology and John Wiley & Sons Ltd Marine tufa-columns, formed by the hydrated carbonate mineral ikaite, present a unique alkaline microbial habitat only found in Ikka Fjord (SW-Greenland). The outermost parts of the ikaite columns exhibit a multitude of physico-chemical gradients, and the porous ikaite is colonized by endolithic phototrophic biofilms serving as a substrate for grazing epifauna, where scraping by sea urchins affects overall column-topography. We present a detailed study of the optical microenvironment, spatial organization, and photosynthetic activity of endolithic phototrophs within the porous ikaite crystal matrix. Cyanobacteria and diatoms formed distinctly coloured zones and were closely associated with ikaite-crystals via excretion of exopolymers. Scalar-irradiance measurements showed strong attenuation of visible light (400–700 nm), where only ∼1% of incident irradiance remained at 20 mm depth. Transmission spectra showed in vivo absorption signatures of diatom and cyanobacterial photopigments, which were confirmed by HPLC-analysis. Variable-chlorophyll-fluorescence-imaging showed active photosynthesis with high-light acclimation in the outer diatom layer, and low-light acclimation in the underlying cyanobacterial part. Phototrophs in ikaite thus thrive in polymer-bound endolithic biofilms in a complex gradient microhabitat experiencing constant slow percolation of highly alkaline phosphate-enriched spring water mixing with cold seawater at the tufa-column-apex. We discuss the potential role of these biofilms in ikaite column formation.
format Article in Journal/Newspaper
author Trampe, E
Castenholz, RW
Larsen, JEN
Kühl, M
author_facet Trampe, E
Castenholz, RW
Larsen, JEN
Kühl, M
author_sort Trampe, E
title Phototrophic microbes form endolithic biofilms in ikaite tufa columns (SW Greenland)
title_short Phototrophic microbes form endolithic biofilms in ikaite tufa columns (SW Greenland)
title_full Phototrophic microbes form endolithic biofilms in ikaite tufa columns (SW Greenland)
title_fullStr Phototrophic microbes form endolithic biofilms in ikaite tufa columns (SW Greenland)
title_full_unstemmed Phototrophic microbes form endolithic biofilms in ikaite tufa columns (SW Greenland)
title_sort phototrophic microbes form endolithic biofilms in ikaite tufa columns (sw greenland)
publishDate 2017
url http://hdl.handle.net/10453/125014
long_lat ENVELOPE(-48.100,-48.100,61.150,61.150)
geographic Greenland
Ikka
geographic_facet Greenland
Ikka
genre Greenland
genre_facet Greenland
op_relation Environmental Microbiology
10.1111/1462-2920.13940
Environmental Microbiology, 2017, 19 (11), pp. 4754 - 4770
1462-2912
http://hdl.handle.net/10453/125014
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