Lipid content, composition and dynamics in northern marine diatoms. An experimental study using different analytical methods
In this study, the fluorophore Nile Red was used as a probe for lipid accumulation during nutrient stress in the diatom Coscinodiscus concinnus, and to quantify lipid concentration fluorometrically in 5 monocultures of northern diatoms. The results from the fluorometrical quantification were validat...
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UiT Norges arktiske universitet
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ftunivtroemsoe:oai:munin.uit.no:10037/7144 2023-05-15T15:16:17+02:00 Lipid content, composition and dynamics in northern marine diatoms. An experimental study using different analytical methods Svenning, Jon Brage 2014-11-20 https://hdl.handle.net/10037/7144 eng eng UiT Norges arktiske universitet UiT The Arctic University of Norway https://hdl.handle.net/10037/7144 URN:NBN:no-uit_munin_6740 openAccess Copyright 2014 The Author(s) VDP::Mathematics and natural science: 400::Zoology and botany: 480::Marine biology: 497 VDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480::Marinbiologi: 497 BIO-3950 Master thesis Mastergradsoppgave 2014 ftunivtroemsoe 2021-06-25T17:54:08Z In this study, the fluorophore Nile Red was used as a probe for lipid accumulation during nutrient stress in the diatom Coscinodiscus concinnus, and to quantify lipid concentration fluorometrically in 5 monocultures of northern diatoms. The results from the fluorometrical quantification were validated by solvent extraction and HPLC-MS analysis in Bergen. In addition, 17 monocultures of 7 species of arctic diatoms were analyzed for lipid class and fatty acid composition by HPLC-MS in Prague.Nile Red was shown to be an effective probe for visualizing the physiological state of C. concinnus. The quantification procedure using Nile Red yielded high correlation coefficients in the lipid standards cod liver oil and α-phosphatidylcholine (R2 = 0.995 and 0.985, respectively), but was in all likelihood unable to quantify the true polar and neutral lipid concentration of the diatom samples, possibly due to fluorescence from an unknown source. Solvent extraction in Bergen determined a total lipid concentration of 2.15-7.32% per dry weight, but unidentified contaminations probably caused an over-estimation of the lipid content. The HPLC-MS performed in Bergen produced results that indicated hydrolysis of the sample or unknown contaminations and were not included in the study. The HPLC-MS analysis in Prague revealed large variations in the composition of the main lipid classes (TAG, PC, PG and PS) both within and between species. Large contributions of LPG and LPC were also observed. The composition of fatty acids showed less variation within species, and was similar for all species with the exception of T. gravida. The main fatty acids were C16:0, C16:1, C18:0, C18:1 (n-9), C20:5 (n-3) and C22:6 (n-3). Master Thesis Arctic University of Tromsø: Munin Open Research Archive Arctic Bergen |
institution |
Open Polar |
collection |
University of Tromsø: Munin Open Research Archive |
op_collection_id |
ftunivtroemsoe |
language |
English |
topic |
VDP::Mathematics and natural science: 400::Zoology and botany: 480::Marine biology: 497 VDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480::Marinbiologi: 497 BIO-3950 |
spellingShingle |
VDP::Mathematics and natural science: 400::Zoology and botany: 480::Marine biology: 497 VDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480::Marinbiologi: 497 BIO-3950 Svenning, Jon Brage Lipid content, composition and dynamics in northern marine diatoms. An experimental study using different analytical methods |
topic_facet |
VDP::Mathematics and natural science: 400::Zoology and botany: 480::Marine biology: 497 VDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480::Marinbiologi: 497 BIO-3950 |
description |
In this study, the fluorophore Nile Red was used as a probe for lipid accumulation during nutrient stress in the diatom Coscinodiscus concinnus, and to quantify lipid concentration fluorometrically in 5 monocultures of northern diatoms. The results from the fluorometrical quantification were validated by solvent extraction and HPLC-MS analysis in Bergen. In addition, 17 monocultures of 7 species of arctic diatoms were analyzed for lipid class and fatty acid composition by HPLC-MS in Prague.Nile Red was shown to be an effective probe for visualizing the physiological state of C. concinnus. The quantification procedure using Nile Red yielded high correlation coefficients in the lipid standards cod liver oil and α-phosphatidylcholine (R2 = 0.995 and 0.985, respectively), but was in all likelihood unable to quantify the true polar and neutral lipid concentration of the diatom samples, possibly due to fluorescence from an unknown source. Solvent extraction in Bergen determined a total lipid concentration of 2.15-7.32% per dry weight, but unidentified contaminations probably caused an over-estimation of the lipid content. The HPLC-MS performed in Bergen produced results that indicated hydrolysis of the sample or unknown contaminations and were not included in the study. The HPLC-MS analysis in Prague revealed large variations in the composition of the main lipid classes (TAG, PC, PG and PS) both within and between species. Large contributions of LPG and LPC were also observed. The composition of fatty acids showed less variation within species, and was similar for all species with the exception of T. gravida. The main fatty acids were C16:0, C16:1, C18:0, C18:1 (n-9), C20:5 (n-3) and C22:6 (n-3). |
format |
Master Thesis |
author |
Svenning, Jon Brage |
author_facet |
Svenning, Jon Brage |
author_sort |
Svenning, Jon Brage |
title |
Lipid content, composition and dynamics in northern marine diatoms. An experimental study using different analytical methods |
title_short |
Lipid content, composition and dynamics in northern marine diatoms. An experimental study using different analytical methods |
title_full |
Lipid content, composition and dynamics in northern marine diatoms. An experimental study using different analytical methods |
title_fullStr |
Lipid content, composition and dynamics in northern marine diatoms. An experimental study using different analytical methods |
title_full_unstemmed |
Lipid content, composition and dynamics in northern marine diatoms. An experimental study using different analytical methods |
title_sort |
lipid content, composition and dynamics in northern marine diatoms. an experimental study using different analytical methods |
publisher |
UiT Norges arktiske universitet |
publishDate |
2014 |
url |
https://hdl.handle.net/10037/7144 |
geographic |
Arctic Bergen |
geographic_facet |
Arctic Bergen |
genre |
Arctic |
genre_facet |
Arctic |
op_relation |
https://hdl.handle.net/10037/7144 URN:NBN:no-uit_munin_6740 |
op_rights |
openAccess Copyright 2014 The Author(s) |
_version_ |
1766346567015464960 |