Effect of simulated latitudinal variation in daylength conditions on oscillations of circadian gene expression in populations of woodland strawberry (Fragaria vesca L.) from Northern Norway and Italy
Almost all species on Earth possess circadian rhythms that align their physiological processes with suitable times of day and year based on predictable changes in the light cycle. While it is known that natural variations exist in photoperiodic responses regulated by the circadian clock, there are c...
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Format: | Master Thesis |
Language: | English |
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UiT Norges arktiske universitet
2021
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Online Access: | https://hdl.handle.net/10037/21786 |
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author | Faehn, Corine |
author_facet | Faehn, Corine |
author_sort | Faehn, Corine |
collection | University of Tromsø: Munin Open Research Archive |
description | Almost all species on Earth possess circadian rhythms that align their physiological processes with suitable times of day and year based on predictable changes in the light cycle. While it is known that natural variations exist in photoperiodic responses regulated by the circadian clock, there are currently no studies assessing the effect of latitudinal variations in daylength on the properties of plant circadian genes. This thesis investigated the association of the properties of the circadian clock with daylength in two woodland strawberry (Fragaria vesca L.) clones originating from Italy (45°N) and Northern Norway (69°N). Plants were grown under two simulated daylengths (18h photosynthetic light/6h twilight and 15h photosynthetic light/1h twilight/8h dark) corresponding with the summer photoperiod at each latitude. Real-time qPCR was used to analyze the expression of eight circadian clock genes present in the leaves over a time-course of 48 hours. Six of the genes (FvLHY, FvRVE8, FvPRR9, FvPRR7, FvPRR5, and FvLUX) expressed clear circadian oscillations of transcription levels in both daylengths, with significantly longer phases of expression under the longer daylength. Interestingly, there were only differences in expression between the two clones 3.3% of the time, demonstrating a lack of specific latitudinal responses in circadian clock properties in this species. All genes maintained transcriptional rhythms in constant darkness except for two (FvPRR9 and FvPRDX) where transcription was completely abolished. FvPRDX also had no rhythm of transcription, though other studies have shown that the oxidation cycles of peroxiredoxin proteins do exhibit circadian rhythmicity. One gene (FvTOC1) had an irregular rhythm that warrants further testing due to its central role in the circadian pacemaker. This study shows that the oscillations of circadian clock transcription levels in F. vesca from a lower latitudinal origin are highly entrainable to the long daylength conditions that are characteristic of northern ... |
format | Master Thesis |
genre | Northern Norway |
genre_facet | Northern Norway |
geographic | Norway |
geographic_facet | Norway |
id | ftunivtroemsoe:oai:munin.uit.no:10037/21786 |
institution | Open Polar |
language | English |
op_collection_id | ftunivtroemsoe |
op_relation | https://hdl.handle.net/10037/21786 |
op_rights | Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0) openAccess Copyright 2021 The Author(s) https://creativecommons.org/licenses/by-nc-sa/4.0 |
publishDate | 2021 |
publisher | UiT Norges arktiske universitet |
record_format | openpolar |
spelling | ftunivtroemsoe:oai:munin.uit.no:10037/21786 2025-04-13T14:24:30+00:00 Effect of simulated latitudinal variation in daylength conditions on oscillations of circadian gene expression in populations of woodland strawberry (Fragaria vesca L.) from Northern Norway and Italy Faehn, Corine 2021-05-15 https://hdl.handle.net/10037/21786 eng eng UiT Norges arktiske universitet UiT The Arctic University of Norway https://hdl.handle.net/10037/21786 Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0) openAccess Copyright 2021 The Author(s) https://creativecommons.org/licenses/by-nc-sa/4.0 VDP::Mathematics and natural science: 400::Basic biosciences: 470::Molecular biology: 473 VDP::Matematikk og Naturvitenskap: 400::Basale biofag: 470::Molekylærbiologi: 473 BIO-3950 Master thesis Mastergradsoppgave 2021 ftunivtroemsoe 2025-03-14T05:17:57Z Almost all species on Earth possess circadian rhythms that align their physiological processes with suitable times of day and year based on predictable changes in the light cycle. While it is known that natural variations exist in photoperiodic responses regulated by the circadian clock, there are currently no studies assessing the effect of latitudinal variations in daylength on the properties of plant circadian genes. This thesis investigated the association of the properties of the circadian clock with daylength in two woodland strawberry (Fragaria vesca L.) clones originating from Italy (45°N) and Northern Norway (69°N). Plants were grown under two simulated daylengths (18h photosynthetic light/6h twilight and 15h photosynthetic light/1h twilight/8h dark) corresponding with the summer photoperiod at each latitude. Real-time qPCR was used to analyze the expression of eight circadian clock genes present in the leaves over a time-course of 48 hours. Six of the genes (FvLHY, FvRVE8, FvPRR9, FvPRR7, FvPRR5, and FvLUX) expressed clear circadian oscillations of transcription levels in both daylengths, with significantly longer phases of expression under the longer daylength. Interestingly, there were only differences in expression between the two clones 3.3% of the time, demonstrating a lack of specific latitudinal responses in circadian clock properties in this species. All genes maintained transcriptional rhythms in constant darkness except for two (FvPRR9 and FvPRDX) where transcription was completely abolished. FvPRDX also had no rhythm of transcription, though other studies have shown that the oxidation cycles of peroxiredoxin proteins do exhibit circadian rhythmicity. One gene (FvTOC1) had an irregular rhythm that warrants further testing due to its central role in the circadian pacemaker. This study shows that the oscillations of circadian clock transcription levels in F. vesca from a lower latitudinal origin are highly entrainable to the long daylength conditions that are characteristic of northern ... Master Thesis Northern Norway University of Tromsø: Munin Open Research Archive Norway |
spellingShingle | VDP::Mathematics and natural science: 400::Basic biosciences: 470::Molecular biology: 473 VDP::Matematikk og Naturvitenskap: 400::Basale biofag: 470::Molekylærbiologi: 473 BIO-3950 Faehn, Corine Effect of simulated latitudinal variation in daylength conditions on oscillations of circadian gene expression in populations of woodland strawberry (Fragaria vesca L.) from Northern Norway and Italy |
title | Effect of simulated latitudinal variation in daylength conditions on oscillations of circadian gene expression in populations of woodland strawberry (Fragaria vesca L.) from Northern Norway and Italy |
title_full | Effect of simulated latitudinal variation in daylength conditions on oscillations of circadian gene expression in populations of woodland strawberry (Fragaria vesca L.) from Northern Norway and Italy |
title_fullStr | Effect of simulated latitudinal variation in daylength conditions on oscillations of circadian gene expression in populations of woodland strawberry (Fragaria vesca L.) from Northern Norway and Italy |
title_full_unstemmed | Effect of simulated latitudinal variation in daylength conditions on oscillations of circadian gene expression in populations of woodland strawberry (Fragaria vesca L.) from Northern Norway and Italy |
title_short | Effect of simulated latitudinal variation in daylength conditions on oscillations of circadian gene expression in populations of woodland strawberry (Fragaria vesca L.) from Northern Norway and Italy |
title_sort | effect of simulated latitudinal variation in daylength conditions on oscillations of circadian gene expression in populations of woodland strawberry (fragaria vesca l.) from northern norway and italy |
topic | VDP::Mathematics and natural science: 400::Basic biosciences: 470::Molecular biology: 473 VDP::Matematikk og Naturvitenskap: 400::Basale biofag: 470::Molekylærbiologi: 473 BIO-3950 |
topic_facet | VDP::Mathematics and natural science: 400::Basic biosciences: 470::Molecular biology: 473 VDP::Matematikk og Naturvitenskap: 400::Basale biofag: 470::Molekylærbiologi: 473 BIO-3950 |
url | https://hdl.handle.net/10037/21786 |