T-box transcription factor eomesodermin/Tbr2 in Atlantic cod (Gadus morhua L.): Molecular characterization, promoter structure and function analysis

Eomesodermin (Eomes) is a member of T-box transcription factor family and plays an important role in the regulation of a wide variety of developmental processes and immune response in animals. Here we report cloning and characterization of the full-length cDNA of Atlantic cod Eomes (GmEomes), which...

Full description

Bibliographic Details
Published in:Fish & Shellfish Immunology
Main Authors: Chi, Heng, Sørmo, Kristian Gillebo, Diao, Jing, Dalmo, Roy Ambli
Format: Article in Journal/Newspaper
Language:English
Published: Elsevier 2019
Subjects:
Online Access:https://hdl.handle.net/10037/17710
https://doi.org/10.1016/j.fsi.2019.07.021
id ftunivtroemsoe:oai:munin.uit.no:10037/17710
record_format openpolar
spelling ftunivtroemsoe:oai:munin.uit.no:10037/17710 2023-05-15T15:27:03+02:00 T-box transcription factor eomesodermin/Tbr2 in Atlantic cod (Gadus morhua L.): Molecular characterization, promoter structure and function analysis Chi, Heng Sørmo, Kristian Gillebo Diao, Jing Dalmo, Roy Ambli 2019-07-11 https://hdl.handle.net/10037/17710 https://doi.org/10.1016/j.fsi.2019.07.021 eng eng Elsevier Fish and Shellfish Immunology info:eu-repo/grantAgreement/RCN/HAVBRUK2/237315/Norway/Fish Virus Vaccines/ViVaFish/ info:eu-repo/grantAgreement/RCN/NANO2021/239140/Norway/Nanoparticle encapsulation of plant-based vaccine against piscine reovirus infection in salmon// Chi H, Sørmo KG, Diao, Dalmo RA. T-box transcription factor eomesodermin/Tbr2 in Atlantic cod (Gadus morhua L.): Molecular characterization, promoter structure and function analysis. Fish and Shellfish Immunology. 2019;93:28-38 FRIDAID 1742184 doi:10.1016/j.fsi.2019.07.021 1050-4648 1095-9947 https://hdl.handle.net/10037/17710 openAccess Copyright 2019 The Author(s). VDP::Mathematics and natural science: 400::Basic biosciences: 470::Genetics and genomics: 474 VDP::Matematikk og Naturvitenskap: 400::Basale biofag: 470::Genetikk og genomikk: 474 Journal article Tidsskriftartikkel Peer reviewed acceptedVersion 2019 ftunivtroemsoe https://doi.org/10.1016/j.fsi.2019.07.021 2021-06-25T17:57:03Z Eomesodermin (Eomes) is a member of T-box transcription factor family and plays an important role in the regulation of a wide variety of developmental processes and immune response in animals. Here we report cloning and characterization of the full-length cDNA of Atlantic cod Eomes (GmEomes), which possesses a TBOX_3 domain similar to its counterpart in mammals. The regulated expression was observed in head kidney and spleen in response to live Vibrio anguillarum infection in vivo , and spleen leukocytes in vitro after PMA and poly I:C stimulation. Furthermore, we determined a 694 bp sequence, upstream of the transcriptional start site (TSS), to contain a number of sequence motifs that matched known transcription factor-binding sites. Activities of the presumptive regulatory gene were assessed by transfecting different 5′-deletion constructs in CHSE-214 cells. The results showed that the basal promoters and positive transcriptional regulator activities of GmEomes were dependent by sequences located from −694 to −376 bp upstream of TSS. Furthermore, we found that some Eomes binding sites were present in the 5′-flanking regions of the cod IFNγ gene predicted by bioinformatics. However, Co-transfection of eomesodermin overexpression plasmids with INFγ reporter vector into CHSE-214 cells determined that Atlantic cod eomesodermin played a minor role in activation of the INFγ promoter. Article in Journal/Newspaper atlantic cod Gadus morhua University of Tromsø: Munin Open Research Archive Fish & Shellfish Immunology 93 28 38
institution Open Polar
collection University of Tromsø: Munin Open Research Archive
op_collection_id ftunivtroemsoe
language English
topic VDP::Mathematics and natural science: 400::Basic biosciences: 470::Genetics and genomics: 474
VDP::Matematikk og Naturvitenskap: 400::Basale biofag: 470::Genetikk og genomikk: 474
spellingShingle VDP::Mathematics and natural science: 400::Basic biosciences: 470::Genetics and genomics: 474
VDP::Matematikk og Naturvitenskap: 400::Basale biofag: 470::Genetikk og genomikk: 474
Chi, Heng
Sørmo, Kristian Gillebo
Diao, Jing
Dalmo, Roy Ambli
T-box transcription factor eomesodermin/Tbr2 in Atlantic cod (Gadus morhua L.): Molecular characterization, promoter structure and function analysis
topic_facet VDP::Mathematics and natural science: 400::Basic biosciences: 470::Genetics and genomics: 474
VDP::Matematikk og Naturvitenskap: 400::Basale biofag: 470::Genetikk og genomikk: 474
description Eomesodermin (Eomes) is a member of T-box transcription factor family and plays an important role in the regulation of a wide variety of developmental processes and immune response in animals. Here we report cloning and characterization of the full-length cDNA of Atlantic cod Eomes (GmEomes), which possesses a TBOX_3 domain similar to its counterpart in mammals. The regulated expression was observed in head kidney and spleen in response to live Vibrio anguillarum infection in vivo , and spleen leukocytes in vitro after PMA and poly I:C stimulation. Furthermore, we determined a 694 bp sequence, upstream of the transcriptional start site (TSS), to contain a number of sequence motifs that matched known transcription factor-binding sites. Activities of the presumptive regulatory gene were assessed by transfecting different 5′-deletion constructs in CHSE-214 cells. The results showed that the basal promoters and positive transcriptional regulator activities of GmEomes were dependent by sequences located from −694 to −376 bp upstream of TSS. Furthermore, we found that some Eomes binding sites were present in the 5′-flanking regions of the cod IFNγ gene predicted by bioinformatics. However, Co-transfection of eomesodermin overexpression plasmids with INFγ reporter vector into CHSE-214 cells determined that Atlantic cod eomesodermin played a minor role in activation of the INFγ promoter.
format Article in Journal/Newspaper
author Chi, Heng
Sørmo, Kristian Gillebo
Diao, Jing
Dalmo, Roy Ambli
author_facet Chi, Heng
Sørmo, Kristian Gillebo
Diao, Jing
Dalmo, Roy Ambli
author_sort Chi, Heng
title T-box transcription factor eomesodermin/Tbr2 in Atlantic cod (Gadus morhua L.): Molecular characterization, promoter structure and function analysis
title_short T-box transcription factor eomesodermin/Tbr2 in Atlantic cod (Gadus morhua L.): Molecular characterization, promoter structure and function analysis
title_full T-box transcription factor eomesodermin/Tbr2 in Atlantic cod (Gadus morhua L.): Molecular characterization, promoter structure and function analysis
title_fullStr T-box transcription factor eomesodermin/Tbr2 in Atlantic cod (Gadus morhua L.): Molecular characterization, promoter structure and function analysis
title_full_unstemmed T-box transcription factor eomesodermin/Tbr2 in Atlantic cod (Gadus morhua L.): Molecular characterization, promoter structure and function analysis
title_sort t-box transcription factor eomesodermin/tbr2 in atlantic cod (gadus morhua l.): molecular characterization, promoter structure and function analysis
publisher Elsevier
publishDate 2019
url https://hdl.handle.net/10037/17710
https://doi.org/10.1016/j.fsi.2019.07.021
genre atlantic cod
Gadus morhua
genre_facet atlantic cod
Gadus morhua
op_relation Fish and Shellfish Immunology
info:eu-repo/grantAgreement/RCN/HAVBRUK2/237315/Norway/Fish Virus Vaccines/ViVaFish/
info:eu-repo/grantAgreement/RCN/NANO2021/239140/Norway/Nanoparticle encapsulation of plant-based vaccine against piscine reovirus infection in salmon//
Chi H, Sørmo KG, Diao, Dalmo RA. T-box transcription factor eomesodermin/Tbr2 in Atlantic cod (Gadus morhua L.): Molecular characterization, promoter structure and function analysis. Fish and Shellfish Immunology. 2019;93:28-38
FRIDAID 1742184
doi:10.1016/j.fsi.2019.07.021
1050-4648
1095-9947
https://hdl.handle.net/10037/17710
op_rights openAccess
Copyright 2019 The Author(s).
op_doi https://doi.org/10.1016/j.fsi.2019.07.021
container_title Fish & Shellfish Immunology
container_volume 93
container_start_page 28
op_container_end_page 38
_version_ 1766357516083527680