Towards a global arctic-alpine model for Near-infrared reflectance spectroscopy (NIRS) predictions of foliar nitrogen, phosphorus and carbon content
Source at https://doi.org/10.1038/s41598-019-44558-9. Near-infrared spectroscopy (NIRS) is a high-throughput technology with potential to infer nitrogen (N), phosphorus (P) and carbon (C) content of all vascular plants based on empirical calibrations with chemical analysis, but is currently limited...
Published in: | Scientific Reports |
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Main Authors: | , , , , , , |
Format: | Article in Journal/Newspaper |
Language: | English |
Published: |
Nature Research
2019
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Subjects: | |
Online Access: | https://hdl.handle.net/10037/16706 https://doi.org/10.1038/s41598-019-44558-9 |
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author | Murguzur, Francisco Javier Ancin Bison, Marjorie Smis, Adriaan Bohner, Hanna Struyf, Eric Meire, Patrick Bråthen, Kari Anne |
author_facet | Murguzur, Francisco Javier Ancin Bison, Marjorie Smis, Adriaan Bohner, Hanna Struyf, Eric Meire, Patrick Bråthen, Kari Anne |
author_sort | Murguzur, Francisco Javier Ancin |
collection | University of Tromsø: Munin Open Research Archive |
container_issue | 1 |
container_title | Scientific Reports |
container_volume | 9 |
description | Source at https://doi.org/10.1038/s41598-019-44558-9. Near-infrared spectroscopy (NIRS) is a high-throughput technology with potential to infer nitrogen (N), phosphorus (P) and carbon (C) content of all vascular plants based on empirical calibrations with chemical analysis, but is currently limited to the sample populations upon which it is based. Here we provide a first step towards a global arctic-alpine NIRS model of foliar N, P and C content. We found calibration models to perform well (R2 validation = 0.94 and RMSEP = 0.20% for N, R2 validation = 0.76 and RMSEP = 0.05% for P and R2 validation = 0.82 and RMSEP = 1.16% for C), integrating 97 species, nine functional groups, three levels of phenology, a range of habitats and two biogeographic regions (the Alps and Fennoscandia). Furthermore, when applied for predicting foliar N, P and C content in samples from a new biogeographic region (Svalbard), our arctic-alpine NIRS model performed well. The precision of the resulting NIRS method meet international requirements, indicating one NIRS measurement scan of a foliar sample will predict its N, P and C content with precision according to standard method performance. The modelling scripts for the prediction of foliar N, P and C content using NIRS along with the calibration models upon which the predictions are based are provided. The modelling scripts can be applied in other labs, and can easily be expanded with data from new biogeographic regions of interest, building the global arctic-alpine model. |
format | Article in Journal/Newspaper |
genre | Arctic Fennoscandia Svalbard |
genre_facet | Arctic Fennoscandia Svalbard |
geographic | Arctic Svalbard |
geographic_facet | Arctic Svalbard |
id | ftunivtroemsoe:oai:munin.uit.no:10037/16706 |
institution | Open Polar |
language | English |
op_collection_id | ftunivtroemsoe |
op_doi | https://doi.org/10.1038/s41598-019-44558-9 |
op_relation | Scientific Reports FRIDAID 1742245 https://hdl.handle.net/10037/16706 |
op_rights | openAccess |
publishDate | 2019 |
publisher | Nature Research |
record_format | openpolar |
spelling | ftunivtroemsoe:oai:munin.uit.no:10037/16706 2025-04-13T14:13:37+00:00 Towards a global arctic-alpine model for Near-infrared reflectance spectroscopy (NIRS) predictions of foliar nitrogen, phosphorus and carbon content Murguzur, Francisco Javier Ancin Bison, Marjorie Smis, Adriaan Bohner, Hanna Struyf, Eric Meire, Patrick Bråthen, Kari Anne 2019-06-04 https://hdl.handle.net/10037/16706 https://doi.org/10.1038/s41598-019-44558-9 eng eng Nature Research Scientific Reports FRIDAID 1742245 https://hdl.handle.net/10037/16706 openAccess VDP::Mathematics and natural science: 400::Zoology and botany: 480 VDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480 Journal article Tidsskriftartikkel Peer reviewed 2019 ftunivtroemsoe https://doi.org/10.1038/s41598-019-44558-9 2025-03-14T05:17:55Z Source at https://doi.org/10.1038/s41598-019-44558-9. Near-infrared spectroscopy (NIRS) is a high-throughput technology with potential to infer nitrogen (N), phosphorus (P) and carbon (C) content of all vascular plants based on empirical calibrations with chemical analysis, but is currently limited to the sample populations upon which it is based. Here we provide a first step towards a global arctic-alpine NIRS model of foliar N, P and C content. We found calibration models to perform well (R2 validation = 0.94 and RMSEP = 0.20% for N, R2 validation = 0.76 and RMSEP = 0.05% for P and R2 validation = 0.82 and RMSEP = 1.16% for C), integrating 97 species, nine functional groups, three levels of phenology, a range of habitats and two biogeographic regions (the Alps and Fennoscandia). Furthermore, when applied for predicting foliar N, P and C content in samples from a new biogeographic region (Svalbard), our arctic-alpine NIRS model performed well. The precision of the resulting NIRS method meet international requirements, indicating one NIRS measurement scan of a foliar sample will predict its N, P and C content with precision according to standard method performance. The modelling scripts for the prediction of foliar N, P and C content using NIRS along with the calibration models upon which the predictions are based are provided. The modelling scripts can be applied in other labs, and can easily be expanded with data from new biogeographic regions of interest, building the global arctic-alpine model. Article in Journal/Newspaper Arctic Fennoscandia Svalbard University of Tromsø: Munin Open Research Archive Arctic Svalbard Scientific Reports 9 1 |
spellingShingle | VDP::Mathematics and natural science: 400::Zoology and botany: 480 VDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480 Murguzur, Francisco Javier Ancin Bison, Marjorie Smis, Adriaan Bohner, Hanna Struyf, Eric Meire, Patrick Bråthen, Kari Anne Towards a global arctic-alpine model for Near-infrared reflectance spectroscopy (NIRS) predictions of foliar nitrogen, phosphorus and carbon content |
title | Towards a global arctic-alpine model for Near-infrared reflectance spectroscopy (NIRS) predictions of foliar nitrogen, phosphorus and carbon content |
title_full | Towards a global arctic-alpine model for Near-infrared reflectance spectroscopy (NIRS) predictions of foliar nitrogen, phosphorus and carbon content |
title_fullStr | Towards a global arctic-alpine model for Near-infrared reflectance spectroscopy (NIRS) predictions of foliar nitrogen, phosphorus and carbon content |
title_full_unstemmed | Towards a global arctic-alpine model for Near-infrared reflectance spectroscopy (NIRS) predictions of foliar nitrogen, phosphorus and carbon content |
title_short | Towards a global arctic-alpine model for Near-infrared reflectance spectroscopy (NIRS) predictions of foliar nitrogen, phosphorus and carbon content |
title_sort | towards a global arctic-alpine model for near-infrared reflectance spectroscopy (nirs) predictions of foliar nitrogen, phosphorus and carbon content |
topic | VDP::Mathematics and natural science: 400::Zoology and botany: 480 VDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480 |
topic_facet | VDP::Mathematics and natural science: 400::Zoology and botany: 480 VDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480 |
url | https://hdl.handle.net/10037/16706 https://doi.org/10.1038/s41598-019-44558-9 |