A genetic fingerprint of Amphipoda from Icelandic waters – the baseline for further biodiversity and biogeography studies

Source at https://doi.org/10.3897/zookeys.731.19931 . Amphipods constitute an abundant part of Icelandic deep-sea zoobenthos yet knowledge of the diversity of this fauna, particularly at the molecular level, is scarce. The present work aims to use molecular methods to investigate genetic variation o...

Full description

Bibliographic Details
Published in:ZooKeys
Main Authors: Jażdżewska, Anna M., Corbari, Laure, Driskell, Amy, Frutos, Inmaculada, Havermans, Charlotte, Hendrycks, Ed, Hughes, Lauren E., Lörz, Anne-Nina, Stransky, Bente, Tandberg, Anne Helene S., Vader, Wim, Brix, Saskia
Format: Article in Journal/Newspaper
Language:English
Published: Pensoft Publishers 2018
Subjects:
Online Access:https://hdl.handle.net/10037/13594
https://doi.org/10.3897/zookeys.731.19931
id ftunivtroemsoe:oai:munin.uit.no:10037/13594
record_format openpolar
spelling ftunivtroemsoe:oai:munin.uit.no:10037/13594 2023-05-15T17:34:54+02:00 A genetic fingerprint of Amphipoda from Icelandic waters – the baseline for further biodiversity and biogeography studies Jażdżewska, Anna M. Corbari, Laure Driskell, Amy Frutos, Inmaculada Havermans, Charlotte Hendrycks, Ed Hughes, Lauren E. Lörz, Anne-Nina Stransky, Bente Tandberg, Anne Helene S. Vader, Wim Brix, Saskia 2018-01-23 https://hdl.handle.net/10037/13594 https://doi.org/10.3897/zookeys.731.19931 eng eng Pensoft Publishers Zookeys Jażdżewska, A.M., Corbari, L., Driskell, A., Frutos, I., Havermans, C., Hendrycks, E., . Brix, S. (2018). A genetic fingerprint of Amphipoda from Icelandic waters – the baseline for further biodiversity and biogeography studies. Zookeys, 731, 55-73. https://doi.org/10.3897/zookeys.731.19931 FRIDAID 1551388 doi:10.3897/zookeys.731.19931 1313-2989 1313-2970 https://hdl.handle.net/10037/13594 openAccess VDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480 VDP::Mathematics and natural science: 400::Zoology and botany: 480 Amphipoda COI barcoding deep sea North Atlantic Journal article Tidsskriftartikkel Peer reviewed 2018 ftunivtroemsoe https://doi.org/10.3897/zookeys.731.19931 2021-06-25T17:55:43Z Source at https://doi.org/10.3897/zookeys.731.19931 . Amphipods constitute an abundant part of Icelandic deep-sea zoobenthos yet knowledge of the diversity of this fauna, particularly at the molecular level, is scarce. The present work aims to use molecular methods to investigate genetic variation of the Amphipoda sampled during two IceAGE collecting expeditions. The mitochondrial cytochrome oxidase subunit 1 (COI) of 167 individuals originally assigned to 75 morphospecies was analysed. These targeted morhospecies were readily identifiable by experts using light microscopy and representative of families where there is current ongoing taxonomic research. The study resulted in 81 Barcode Identity Numbers (BINs) (of which >90% were published for the first time), while Automatic Barcode Gap Discovery revealed the existence of 78 to 83 Molecular Operational Taxonomic Units (MOTUs). Six nominal species (Rhachotropis helleri, Arrhis phyllonyx, Deflexilodes tenuirostratus, Paroediceros propinquus, Metopa boeckii, Astyra abyssi) appeared to have a molecular variation higher than the 0.03 threshold of both p-distance and K2P usually used for amphipod species delineation. Conversely, two Oedicerotidae regarded as separate morphospecies clustered together with divergences in the order of intraspecific variation. The incongruence between the BINs associated with presently identified species and the publicly available data of the same taxa was observed in case of Paramphithoe hystrix and Amphilochus manudens. The findings from this research project highlight the necessity of supporting molecular studies with thorough morphology species analyses. Article in Journal/Newspaper North Atlantic University of Tromsø: Munin Open Research Archive ZooKeys 731 55 73
institution Open Polar
collection University of Tromsø: Munin Open Research Archive
op_collection_id ftunivtroemsoe
language English
topic VDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480
VDP::Mathematics and natural science: 400::Zoology and botany: 480
Amphipoda
COI barcoding
deep sea
North Atlantic
spellingShingle VDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480
VDP::Mathematics and natural science: 400::Zoology and botany: 480
Amphipoda
COI barcoding
deep sea
North Atlantic
Jażdżewska, Anna M.
Corbari, Laure
Driskell, Amy
Frutos, Inmaculada
Havermans, Charlotte
Hendrycks, Ed
Hughes, Lauren E.
Lörz, Anne-Nina
Stransky, Bente
Tandberg, Anne Helene S.
Vader, Wim
Brix, Saskia
A genetic fingerprint of Amphipoda from Icelandic waters – the baseline for further biodiversity and biogeography studies
topic_facet VDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480
VDP::Mathematics and natural science: 400::Zoology and botany: 480
Amphipoda
COI barcoding
deep sea
North Atlantic
description Source at https://doi.org/10.3897/zookeys.731.19931 . Amphipods constitute an abundant part of Icelandic deep-sea zoobenthos yet knowledge of the diversity of this fauna, particularly at the molecular level, is scarce. The present work aims to use molecular methods to investigate genetic variation of the Amphipoda sampled during two IceAGE collecting expeditions. The mitochondrial cytochrome oxidase subunit 1 (COI) of 167 individuals originally assigned to 75 morphospecies was analysed. These targeted morhospecies were readily identifiable by experts using light microscopy and representative of families where there is current ongoing taxonomic research. The study resulted in 81 Barcode Identity Numbers (BINs) (of which >90% were published for the first time), while Automatic Barcode Gap Discovery revealed the existence of 78 to 83 Molecular Operational Taxonomic Units (MOTUs). Six nominal species (Rhachotropis helleri, Arrhis phyllonyx, Deflexilodes tenuirostratus, Paroediceros propinquus, Metopa boeckii, Astyra abyssi) appeared to have a molecular variation higher than the 0.03 threshold of both p-distance and K2P usually used for amphipod species delineation. Conversely, two Oedicerotidae regarded as separate morphospecies clustered together with divergences in the order of intraspecific variation. The incongruence between the BINs associated with presently identified species and the publicly available data of the same taxa was observed in case of Paramphithoe hystrix and Amphilochus manudens. The findings from this research project highlight the necessity of supporting molecular studies with thorough morphology species analyses.
format Article in Journal/Newspaper
author Jażdżewska, Anna M.
Corbari, Laure
Driskell, Amy
Frutos, Inmaculada
Havermans, Charlotte
Hendrycks, Ed
Hughes, Lauren E.
Lörz, Anne-Nina
Stransky, Bente
Tandberg, Anne Helene S.
Vader, Wim
Brix, Saskia
author_facet Jażdżewska, Anna M.
Corbari, Laure
Driskell, Amy
Frutos, Inmaculada
Havermans, Charlotte
Hendrycks, Ed
Hughes, Lauren E.
Lörz, Anne-Nina
Stransky, Bente
Tandberg, Anne Helene S.
Vader, Wim
Brix, Saskia
author_sort Jażdżewska, Anna M.
title A genetic fingerprint of Amphipoda from Icelandic waters – the baseline for further biodiversity and biogeography studies
title_short A genetic fingerprint of Amphipoda from Icelandic waters – the baseline for further biodiversity and biogeography studies
title_full A genetic fingerprint of Amphipoda from Icelandic waters – the baseline for further biodiversity and biogeography studies
title_fullStr A genetic fingerprint of Amphipoda from Icelandic waters – the baseline for further biodiversity and biogeography studies
title_full_unstemmed A genetic fingerprint of Amphipoda from Icelandic waters – the baseline for further biodiversity and biogeography studies
title_sort genetic fingerprint of amphipoda from icelandic waters – the baseline for further biodiversity and biogeography studies
publisher Pensoft Publishers
publishDate 2018
url https://hdl.handle.net/10037/13594
https://doi.org/10.3897/zookeys.731.19931
genre North Atlantic
genre_facet North Atlantic
op_relation Zookeys
Jażdżewska, A.M., Corbari, L., Driskell, A., Frutos, I., Havermans, C., Hendrycks, E., . Brix, S. (2018). A genetic fingerprint of Amphipoda from Icelandic waters – the baseline for further biodiversity and biogeography studies. Zookeys, 731, 55-73. https://doi.org/10.3897/zookeys.731.19931
FRIDAID 1551388
doi:10.3897/zookeys.731.19931
1313-2989
1313-2970
https://hdl.handle.net/10037/13594
op_rights openAccess
op_doi https://doi.org/10.3897/zookeys.731.19931
container_title ZooKeys
container_volume 731
container_start_page 55
op_container_end_page 73
_version_ 1766133884957753344