Field sampling marine plankton for biodiscovery
Source at https://doi.org/10.1038/s41598-017-15980-8 Microalgae and plankton can be a rich source of bioactivity. However, induction of secondary metabolite production in lab conditions can be difficult. One simple way of bypassing this issue is to collect biomass in the field and screen for bioacti...
Published in: | Scientific Reports |
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Main Authors: | , , , |
Format: | Article in Journal/Newspaper |
Language: | English |
Published: |
Nature Publishing Group
2017
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Subjects: | |
Online Access: | https://hdl.handle.net/10037/11911 https://doi.org/10.1038/s41598-017-15980-8 |
_version_ | 1829313123661643776 |
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author | Ingebrigtsen, Richard Andre Hansen, Espen Andersen, Jeanette Hammer Eilertsen, Hans Christian |
author_facet | Ingebrigtsen, Richard Andre Hansen, Espen Andersen, Jeanette Hammer Eilertsen, Hans Christian |
author_sort | Ingebrigtsen, Richard Andre |
collection | University of Tromsø: Munin Open Research Archive |
container_issue | 1 |
container_title | Scientific Reports |
container_volume | 7 |
description | Source at https://doi.org/10.1038/s41598-017-15980-8 Microalgae and plankton can be a rich source of bioactivity. However, induction of secondary metabolite production in lab conditions can be difficult. One simple way of bypassing this issue is to collect biomass in the field and screen for bioactivity. Therefore, bulk net samples from three areas along the coast of northern Norway and Spitsbergen were collected, extracted and fractionated. Biomass samples from a strain of a mass-cultivated diatom Porosira glacialis were used as a reference for comparison to field samples. Screening for bioactivity was performed with 13 assays within four therapeutic areas: antibacterial, anticancer, antidiabetes and antioxidation. We analysed the metabolic profiles of the samples using high resolution - mass spectroscopy (HR-MS). Principal component analysis showed a marked difference in metabolite profiles between the field samples and the photobioreactor culture; furthermore, the number of active fractions and extent of bioactivity was different in the field compared to the photobioreactor samples. We found varying levels of bioactivity in all samples, indicating that complex marine field samples could be used to investigate bioactivities from otherwise inaccessible sources. Furthermore, we hypothesize that metabolic pathways that would otherwise been silent under controlled growth in monocultures, might have been activated in the field samples. |
format | Article in Journal/Newspaper |
genre | Northern Norway Spitsbergen |
genre_facet | Northern Norway Spitsbergen |
geographic | Norway |
geographic_facet | Norway |
id | ftunivtroemsoe:oai:munin.uit.no:10037/11911 |
institution | Open Polar |
language | English |
op_collection_id | ftunivtroemsoe |
op_doi | https://doi.org/10.1038/s41598-017-15980-8 |
op_relation | Scientific Reports Ingebrigtsen RA, Hansen E, Andersen JH, Eilertsen HC. Field sampling marine plankton for biodiscovery. Scientific Reports. 2017;7 FRIDAID 1523031 https://hdl.handle.net/10037/11911 |
op_rights | openAccess |
publishDate | 2017 |
publisher | Nature Publishing Group |
record_format | openpolar |
spelling | ftunivtroemsoe:oai:munin.uit.no:10037/11911 2025-04-13T14:24:32+00:00 Field sampling marine plankton for biodiscovery Ingebrigtsen, Richard Andre Hansen, Espen Andersen, Jeanette Hammer Eilertsen, Hans Christian 2017-11-20 https://hdl.handle.net/10037/11911 https://doi.org/10.1038/s41598-017-15980-8 eng eng Nature Publishing Group Scientific Reports Ingebrigtsen RA, Hansen E, Andersen JH, Eilertsen HC. Field sampling marine plankton for biodiscovery. Scientific Reports. 2017;7 FRIDAID 1523031 https://hdl.handle.net/10037/11911 openAccess VDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480::Marinbiologi: 497 VDP::Mathematics and natural science: 400::Zoology and botany: 480::Marine biology: 497 Journal article Tidsskriftartikkel Peer reviewed 2017 ftunivtroemsoe https://doi.org/10.1038/s41598-017-15980-8 2025-03-14T05:17:56Z Source at https://doi.org/10.1038/s41598-017-15980-8 Microalgae and plankton can be a rich source of bioactivity. However, induction of secondary metabolite production in lab conditions can be difficult. One simple way of bypassing this issue is to collect biomass in the field and screen for bioactivity. Therefore, bulk net samples from three areas along the coast of northern Norway and Spitsbergen were collected, extracted and fractionated. Biomass samples from a strain of a mass-cultivated diatom Porosira glacialis were used as a reference for comparison to field samples. Screening for bioactivity was performed with 13 assays within four therapeutic areas: antibacterial, anticancer, antidiabetes and antioxidation. We analysed the metabolic profiles of the samples using high resolution - mass spectroscopy (HR-MS). Principal component analysis showed a marked difference in metabolite profiles between the field samples and the photobioreactor culture; furthermore, the number of active fractions and extent of bioactivity was different in the field compared to the photobioreactor samples. We found varying levels of bioactivity in all samples, indicating that complex marine field samples could be used to investigate bioactivities from otherwise inaccessible sources. Furthermore, we hypothesize that metabolic pathways that would otherwise been silent under controlled growth in monocultures, might have been activated in the field samples. Article in Journal/Newspaper Northern Norway Spitsbergen University of Tromsø: Munin Open Research Archive Norway Scientific Reports 7 1 |
spellingShingle | VDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480::Marinbiologi: 497 VDP::Mathematics and natural science: 400::Zoology and botany: 480::Marine biology: 497 Ingebrigtsen, Richard Andre Hansen, Espen Andersen, Jeanette Hammer Eilertsen, Hans Christian Field sampling marine plankton for biodiscovery |
title | Field sampling marine plankton for biodiscovery |
title_full | Field sampling marine plankton for biodiscovery |
title_fullStr | Field sampling marine plankton for biodiscovery |
title_full_unstemmed | Field sampling marine plankton for biodiscovery |
title_short | Field sampling marine plankton for biodiscovery |
title_sort | field sampling marine plankton for biodiscovery |
topic | VDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480::Marinbiologi: 497 VDP::Mathematics and natural science: 400::Zoology and botany: 480::Marine biology: 497 |
topic_facet | VDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480::Marinbiologi: 497 VDP::Mathematics and natural science: 400::Zoology and botany: 480::Marine biology: 497 |
url | https://hdl.handle.net/10037/11911 https://doi.org/10.1038/s41598-017-15980-8 |