Field sampling marine plankton for biodiscovery

Source at https://doi.org/10.1038/s41598-017-15980-8 Microalgae and plankton can be a rich source of bioactivity. However, induction of secondary metabolite production in lab conditions can be difficult. One simple way of bypassing this issue is to collect biomass in the field and screen for bioacti...

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Published in:Scientific Reports
Main Authors: Ingebrigtsen, Richard Andre, Hansen, Espen, Andersen, Jeanette Hammer, Eilertsen, Hans Christian
Format: Article in Journal/Newspaper
Language:English
Published: Nature Publishing Group 2017
Subjects:
Online Access:https://hdl.handle.net/10037/11911
https://doi.org/10.1038/s41598-017-15980-8
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author Ingebrigtsen, Richard Andre
Hansen, Espen
Andersen, Jeanette Hammer
Eilertsen, Hans Christian
author_facet Ingebrigtsen, Richard Andre
Hansen, Espen
Andersen, Jeanette Hammer
Eilertsen, Hans Christian
author_sort Ingebrigtsen, Richard Andre
collection University of Tromsø: Munin Open Research Archive
container_issue 1
container_title Scientific Reports
container_volume 7
description Source at https://doi.org/10.1038/s41598-017-15980-8 Microalgae and plankton can be a rich source of bioactivity. However, induction of secondary metabolite production in lab conditions can be difficult. One simple way of bypassing this issue is to collect biomass in the field and screen for bioactivity. Therefore, bulk net samples from three areas along the coast of northern Norway and Spitsbergen were collected, extracted and fractionated. Biomass samples from a strain of a mass-cultivated diatom Porosira glacialis were used as a reference for comparison to field samples. Screening for bioactivity was performed with 13 assays within four therapeutic areas: antibacterial, anticancer, antidiabetes and antioxidation. We analysed the metabolic profiles of the samples using high resolution - mass spectroscopy (HR-MS). Principal component analysis showed a marked difference in metabolite profiles between the field samples and the photobioreactor culture; furthermore, the number of active fractions and extent of bioactivity was different in the field compared to the photobioreactor samples. We found varying levels of bioactivity in all samples, indicating that complex marine field samples could be used to investigate bioactivities from otherwise inaccessible sources. Furthermore, we hypothesize that metabolic pathways that would otherwise been silent under controlled growth in monocultures, might have been activated in the field samples.
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Ingebrigtsen RA, Hansen E, Andersen JH, Eilertsen HC. Field sampling marine plankton for biodiscovery. Scientific Reports. 2017;7
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spelling ftunivtroemsoe:oai:munin.uit.no:10037/11911 2025-04-13T14:24:32+00:00 Field sampling marine plankton for biodiscovery Ingebrigtsen, Richard Andre Hansen, Espen Andersen, Jeanette Hammer Eilertsen, Hans Christian 2017-11-20 https://hdl.handle.net/10037/11911 https://doi.org/10.1038/s41598-017-15980-8 eng eng Nature Publishing Group Scientific Reports Ingebrigtsen RA, Hansen E, Andersen JH, Eilertsen HC. Field sampling marine plankton for biodiscovery. Scientific Reports. 2017;7 FRIDAID 1523031 https://hdl.handle.net/10037/11911 openAccess VDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480::Marinbiologi: 497 VDP::Mathematics and natural science: 400::Zoology and botany: 480::Marine biology: 497 Journal article Tidsskriftartikkel Peer reviewed 2017 ftunivtroemsoe https://doi.org/10.1038/s41598-017-15980-8 2025-03-14T05:17:56Z Source at https://doi.org/10.1038/s41598-017-15980-8 Microalgae and plankton can be a rich source of bioactivity. However, induction of secondary metabolite production in lab conditions can be difficult. One simple way of bypassing this issue is to collect biomass in the field and screen for bioactivity. Therefore, bulk net samples from three areas along the coast of northern Norway and Spitsbergen were collected, extracted and fractionated. Biomass samples from a strain of a mass-cultivated diatom Porosira glacialis were used as a reference for comparison to field samples. Screening for bioactivity was performed with 13 assays within four therapeutic areas: antibacterial, anticancer, antidiabetes and antioxidation. We analysed the metabolic profiles of the samples using high resolution - mass spectroscopy (HR-MS). Principal component analysis showed a marked difference in metabolite profiles between the field samples and the photobioreactor culture; furthermore, the number of active fractions and extent of bioactivity was different in the field compared to the photobioreactor samples. We found varying levels of bioactivity in all samples, indicating that complex marine field samples could be used to investigate bioactivities from otherwise inaccessible sources. Furthermore, we hypothesize that metabolic pathways that would otherwise been silent under controlled growth in monocultures, might have been activated in the field samples. Article in Journal/Newspaper Northern Norway Spitsbergen University of Tromsø: Munin Open Research Archive Norway Scientific Reports 7 1
spellingShingle VDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480::Marinbiologi: 497
VDP::Mathematics and natural science: 400::Zoology and botany: 480::Marine biology: 497
Ingebrigtsen, Richard Andre
Hansen, Espen
Andersen, Jeanette Hammer
Eilertsen, Hans Christian
Field sampling marine plankton for biodiscovery
title Field sampling marine plankton for biodiscovery
title_full Field sampling marine plankton for biodiscovery
title_fullStr Field sampling marine plankton for biodiscovery
title_full_unstemmed Field sampling marine plankton for biodiscovery
title_short Field sampling marine plankton for biodiscovery
title_sort field sampling marine plankton for biodiscovery
topic VDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480::Marinbiologi: 497
VDP::Mathematics and natural science: 400::Zoology and botany: 480::Marine biology: 497
topic_facet VDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480::Marinbiologi: 497
VDP::Mathematics and natural science: 400::Zoology and botany: 480::Marine biology: 497
url https://hdl.handle.net/10037/11911
https://doi.org/10.1038/s41598-017-15980-8