DNA barcode data reveal biogeographic trends in Arctic non-biting midges
Chironomid flies (non-biting midges) are among the most abundant and diverse animals in Arctic regions, but detailed analyses of species distributions and biogeographical patterns are hampered by challenging taxonomy and reliance on morphology for species-level identification. Here we take advantage...
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ftunivtoronto:oai:localhost:1807/92206 2023-05-15T14:51:56+02:00 DNA barcode data reveal biogeographic trends in Arctic non-biting midges Ekrem, Torbjørn Stur, Elisabeth Orton, Matthew G. Adamowicz, Sarah J 2018-09-24 http://hdl.handle.net/1807/92206 http://www.nrcresearchpress.com/doi/abs/10.1139/gen-2018-0100 unknown NRC Research Press (a division of Canadian Science Publishing) 0831-2796 http://hdl.handle.net/1807/92206 http://www.nrcresearchpress.com/doi/abs/10.1139/gen-2018-0100 Article 2018 ftunivtoronto 2020-06-17T12:22:11Z Chironomid flies (non-biting midges) are among the most abundant and diverse animals in Arctic regions, but detailed analyses of species distributions and biogeographical patterns are hampered by challenging taxonomy and reliance on morphology for species-level identification. Here we take advantage of available DNA barcode data of Arctic Chironomidae in BOLD to analyse similarities in species distributions across a northern Nearctic - West Palearctic gradient. Using more than 260 thousand barcodes representing 4,666 BINs (Barcode Index Numbers) and 826 named species (some with interim names) from a combination of public and novel data, we show that the Greenland chironomid fauna shows affinities to both the Nearctic and the West Palearctic regions. While raw taxon counts indicate a strong Greenland - North American affinity, comparisons using Chaoâ s dissimilarity metric support a slightly higher similarity between Greenland and West Palearctic chironomid communities. Results were relatively consistent across different definitions of species taxonomic units, including morphologically-determined species, BINs, and superBINs based on a ~4.5% threshold. While most taxa found in Greenland are shared with at least one other region, reflecting circum-Arctic dispersal, our results also reveal that Greenland harbours a small endemic biodiversity. Our exploratory study showcases how DNA barcoding efforts using standardized gene regions contribute to an understanding of broad-scale patterns in biogeography by enabling joint analysis of public DNA sequence data derived from diverse prior studies. The accepted manuscript in pdf format is listed with the files at the bottom of this page. The presentation of the authors' names and (or) special characters in the title of the manuscript may differ slightly between what is listed on this page and what is listed in the pdf file of the accepted manuscript; that in the pdf file of the accepted manuscript is what was submitted by the author. Article in Journal/Newspaper Arctic Greenland University of Toronto: Research Repository T-Space Arctic Greenland |
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University of Toronto: Research Repository T-Space |
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ftunivtoronto |
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description |
Chironomid flies (non-biting midges) are among the most abundant and diverse animals in Arctic regions, but detailed analyses of species distributions and biogeographical patterns are hampered by challenging taxonomy and reliance on morphology for species-level identification. Here we take advantage of available DNA barcode data of Arctic Chironomidae in BOLD to analyse similarities in species distributions across a northern Nearctic - West Palearctic gradient. Using more than 260 thousand barcodes representing 4,666 BINs (Barcode Index Numbers) and 826 named species (some with interim names) from a combination of public and novel data, we show that the Greenland chironomid fauna shows affinities to both the Nearctic and the West Palearctic regions. While raw taxon counts indicate a strong Greenland - North American affinity, comparisons using Chaoâ s dissimilarity metric support a slightly higher similarity between Greenland and West Palearctic chironomid communities. Results were relatively consistent across different definitions of species taxonomic units, including morphologically-determined species, BINs, and superBINs based on a ~4.5% threshold. While most taxa found in Greenland are shared with at least one other region, reflecting circum-Arctic dispersal, our results also reveal that Greenland harbours a small endemic biodiversity. Our exploratory study showcases how DNA barcoding efforts using standardized gene regions contribute to an understanding of broad-scale patterns in biogeography by enabling joint analysis of public DNA sequence data derived from diverse prior studies. The accepted manuscript in pdf format is listed with the files at the bottom of this page. The presentation of the authors' names and (or) special characters in the title of the manuscript may differ slightly between what is listed on this page and what is listed in the pdf file of the accepted manuscript; that in the pdf file of the accepted manuscript is what was submitted by the author. |
format |
Article in Journal/Newspaper |
author |
Ekrem, Torbjørn Stur, Elisabeth Orton, Matthew G. Adamowicz, Sarah J |
spellingShingle |
Ekrem, Torbjørn Stur, Elisabeth Orton, Matthew G. Adamowicz, Sarah J DNA barcode data reveal biogeographic trends in Arctic non-biting midges |
author_facet |
Ekrem, Torbjørn Stur, Elisabeth Orton, Matthew G. Adamowicz, Sarah J |
author_sort |
Ekrem, Torbjørn |
title |
DNA barcode data reveal biogeographic trends in Arctic non-biting midges |
title_short |
DNA barcode data reveal biogeographic trends in Arctic non-biting midges |
title_full |
DNA barcode data reveal biogeographic trends in Arctic non-biting midges |
title_fullStr |
DNA barcode data reveal biogeographic trends in Arctic non-biting midges |
title_full_unstemmed |
DNA barcode data reveal biogeographic trends in Arctic non-biting midges |
title_sort |
dna barcode data reveal biogeographic trends in arctic non-biting midges |
publisher |
NRC Research Press (a division of Canadian Science Publishing) |
publishDate |
2018 |
url |
http://hdl.handle.net/1807/92206 http://www.nrcresearchpress.com/doi/abs/10.1139/gen-2018-0100 |
geographic |
Arctic Greenland |
geographic_facet |
Arctic Greenland |
genre |
Arctic Greenland |
genre_facet |
Arctic Greenland |
op_relation |
0831-2796 http://hdl.handle.net/1807/92206 http://www.nrcresearchpress.com/doi/abs/10.1139/gen-2018-0100 |
_version_ |
1766323079442595840 |