Cloning and expression of Tbx3 gene in Siberian sturgeon, Acipenser baerii

Tbx3, a member of the TBX2 subfamily of T-box gene family, encodes a transcription factor with a highly conserved DNA-binding domain, which called T-domain. Tbx3 is involved in morphogenesis and organogenesis in vertebrates, such as limb development, heart remodeling, and neural placode differentiat...

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Main Authors: ZHANG, Hao, FAN, Chun-Xin, SONG, Jia-Kun
Format: Article in Journal/Newspaper
Language:English
Published: Kunming Institute of Zoology, Chinese Academy of Sciences 2012
Subjects:
Online Access:http://hdl.handle.net/1807/64752
http://www.bioline.org.br/abstract?id=zr12024
http://www.bioline.org.br/zr
http://www.zoores.ac.cn/
id ftunivtoronto:oai:localhost:1807/64752
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spelling ftunivtoronto:oai:localhost:1807/64752 2023-05-15T13:01:38+02:00 Cloning and expression of Tbx3 gene in Siberian sturgeon, Acipenser baerii ZHANG, Hao FAN, Chun-Xin SONG, Jia-Kun 2012-11-08 http://hdl.handle.net/1807/64752 http://www.bioline.org.br/abstract?id=zr12024 http://www.bioline.org.br/zr http://www.zoores.ac.cn/ en eng Kunming Institute of Zoology, Chinese Academy of Sciences http://hdl.handle.net/1807/64752 http://www.bioline.org.br/abstract?id=zr12024 http://www.bioline.org.br/zr http://www.zoores.ac.cn/ Copyright 2012 - Kunming Institute of Zoology, the Chinese Academy of Sciences Acipenser baerii Chondrostei Tbx3 Structure Expression Article 2012 ftunivtoronto 2020-06-17T11:51:41Z Tbx3, a member of the TBX2 subfamily of T-box gene family, encodes a transcription factor with a highly conserved DNA-binding domain, which called T-domain. Tbx3 is involved in morphogenesis and organogenesis in vertebrates, such as limb development, heart remodeling, and neural placode differentiation. In the present study, a full-length 2 908 bp Tbx3 cDNA from Acipenser baerii (AbTbx3) was obtained using RT-PCR and RACE technique, which includes a 2 166 bp complete open reading frame encoding a putative peptide of 721 amino acids. AbTbx3 shares 73.5% identity with its human homolog. Particularly, the DNA-binding domain of AbTbx3 shared 95.2% identity with human Tbx3. Phylogenetic analysis revealed that AbTbx3 was grouped with Tbx3s in other vertebrates, which were clustered with Tbx2s and separated from Tbx4/5s. The predicted secondary and three-dimensional structures of the T-domain of AbTbx3 were remarkably similar to human Tbx3. Through semi-quantity RT-PCR, the expression of AbTbx3 was first detected at blastula stage during Siberian sturgeon embryonic development, increased gradually, reached its peak at early tail-bud stage and then decreased slightly. In adult sturgeon, AbTbx3 was strongly expressed in eye, brain, gill, intestines, pectoral fin and pelvic fin, but not in liver, blood, heart, kidney and muscle. The whole mount in situ hybridization showed that AbTbx3 was mainly expressed in the otic vesicle, hindbrain, dorsal notochord, pineal organ and dorsal fin bud in the larvae of stage 37 and 43. Article in Journal/Newspaper Acipenser baerii Siberian sturgeon University of Toronto: Research Repository T-Space
institution Open Polar
collection University of Toronto: Research Repository T-Space
op_collection_id ftunivtoronto
language English
topic Acipenser baerii
Chondrostei
Tbx3
Structure
Expression
spellingShingle Acipenser baerii
Chondrostei
Tbx3
Structure
Expression
ZHANG, Hao
FAN, Chun-Xin
SONG, Jia-Kun
Cloning and expression of Tbx3 gene in Siberian sturgeon, Acipenser baerii
topic_facet Acipenser baerii
Chondrostei
Tbx3
Structure
Expression
description Tbx3, a member of the TBX2 subfamily of T-box gene family, encodes a transcription factor with a highly conserved DNA-binding domain, which called T-domain. Tbx3 is involved in morphogenesis and organogenesis in vertebrates, such as limb development, heart remodeling, and neural placode differentiation. In the present study, a full-length 2 908 bp Tbx3 cDNA from Acipenser baerii (AbTbx3) was obtained using RT-PCR and RACE technique, which includes a 2 166 bp complete open reading frame encoding a putative peptide of 721 amino acids. AbTbx3 shares 73.5% identity with its human homolog. Particularly, the DNA-binding domain of AbTbx3 shared 95.2% identity with human Tbx3. Phylogenetic analysis revealed that AbTbx3 was grouped with Tbx3s in other vertebrates, which were clustered with Tbx2s and separated from Tbx4/5s. The predicted secondary and three-dimensional structures of the T-domain of AbTbx3 were remarkably similar to human Tbx3. Through semi-quantity RT-PCR, the expression of AbTbx3 was first detected at blastula stage during Siberian sturgeon embryonic development, increased gradually, reached its peak at early tail-bud stage and then decreased slightly. In adult sturgeon, AbTbx3 was strongly expressed in eye, brain, gill, intestines, pectoral fin and pelvic fin, but not in liver, blood, heart, kidney and muscle. The whole mount in situ hybridization showed that AbTbx3 was mainly expressed in the otic vesicle, hindbrain, dorsal notochord, pineal organ and dorsal fin bud in the larvae of stage 37 and 43.
format Article in Journal/Newspaper
author ZHANG, Hao
FAN, Chun-Xin
SONG, Jia-Kun
author_facet ZHANG, Hao
FAN, Chun-Xin
SONG, Jia-Kun
author_sort ZHANG, Hao
title Cloning and expression of Tbx3 gene in Siberian sturgeon, Acipenser baerii
title_short Cloning and expression of Tbx3 gene in Siberian sturgeon, Acipenser baerii
title_full Cloning and expression of Tbx3 gene in Siberian sturgeon, Acipenser baerii
title_fullStr Cloning and expression of Tbx3 gene in Siberian sturgeon, Acipenser baerii
title_full_unstemmed Cloning and expression of Tbx3 gene in Siberian sturgeon, Acipenser baerii
title_sort cloning and expression of tbx3 gene in siberian sturgeon, acipenser baerii
publisher Kunming Institute of Zoology, Chinese Academy of Sciences
publishDate 2012
url http://hdl.handle.net/1807/64752
http://www.bioline.org.br/abstract?id=zr12024
http://www.bioline.org.br/zr
http://www.zoores.ac.cn/
genre Acipenser baerii
Siberian sturgeon
genre_facet Acipenser baerii
Siberian sturgeon
op_relation http://hdl.handle.net/1807/64752
http://www.bioline.org.br/abstract?id=zr12024
http://www.bioline.org.br/zr
http://www.zoores.ac.cn/
op_rights Copyright 2012 - Kunming Institute of Zoology, the Chinese Academy of Sciences
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