CSIB v1 (Canadian Sea-ice Biogeochemistry): a sea-ice biogeochemical model for the NEMO community ocean modelling framework

Process-based numerical models are a useful tool for studying marine ecosystems and associated biogeochemical processes in ice-covered regions where observations are scarce. To this end, CSIB v1 (Canadian Sea-ice Biogeochemistry version 1), a new sea-ice biogeochemical model, has been developed and...

Full description

Bibliographic Details
Published in:Geoscientific Model Development
Main Authors: Hayashida, H, Christian, JR, Holdsworth, AM, Hu, X, Monahan, AH, Mortenson, E, Myers, PG, Riche, OGJ, Sou, T, Steiner, NS
Format: Article in Journal/Newspaper
Language:English
Published: Copernicus GmbH 2019
Subjects:
Online Access:https://eprints.utas.edu.au/42065/
https://eprints.utas.edu.au/42065/1/137169%20-%20CSIB%20v1%20%28Canadian%20Sea-ice%20Biogeochemistry%29.pdf
https://eprints.utas.edu.au/42065/2/137169%20-%20supplement.pdf
id ftunivtasmania:oai:eprints.utas.edu.au:42065
record_format openpolar
spelling ftunivtasmania:oai:eprints.utas.edu.au:42065 2023-05-15T15:12:16+02:00 CSIB v1 (Canadian Sea-ice Biogeochemistry): a sea-ice biogeochemical model for the NEMO community ocean modelling framework Hayashida, H Christian, JR Holdsworth, AM Hu, X Monahan, AH Mortenson, E Myers, PG Riche, OGJ Sou, T Steiner, NS 2019 application/pdf https://eprints.utas.edu.au/42065/ https://eprints.utas.edu.au/42065/1/137169%20-%20CSIB%20v1%20%28Canadian%20Sea-ice%20Biogeochemistry%29.pdf https://eprints.utas.edu.au/42065/2/137169%20-%20supplement.pdf en eng Copernicus GmbH https://eprints.utas.edu.au/42065/1/137169%20-%20CSIB%20v1%20%28Canadian%20Sea-ice%20Biogeochemistry%29.pdf https://eprints.utas.edu.au/42065/2/137169%20-%20supplement.pdf Hayashida, H orcid:0000-0002-6349-4947 , Christian, JR, Holdsworth, AM, Hu, X, Monahan, AH, Mortenson, E, Myers, PG, Riche, OGJ, Sou, T and Steiner, NS 2019 , 'CSIB v1 (Canadian Sea-ice Biogeochemistry): a sea-ice biogeochemical model for the NEMO community ocean modelling framework' , Geoscientific Model Development, vol. 12 , pp. 1965-1990 , doi:10.5194/gmd-12-1965-2019 <http://dx.doi.org/10.5194/gmd-12-1965-2019>. arctic biogeochemistry numerical modelling sea ice primary production dimethylsulfide Article PeerReviewed 2019 ftunivtasmania https://doi.org/10.5194/gmd-12-1965-2019 2022-02-07T23:18:18Z Process-based numerical models are a useful tool for studying marine ecosystems and associated biogeochemical processes in ice-covered regions where observations are scarce. To this end, CSIB v1 (Canadian Sea-ice Biogeochemistry version 1), a new sea-ice biogeochemical model, has been developed and embedded into the Nucleus for European Modelling of the Ocean (NEMO) modelling system. This model consists of a three-compartment (ice algae, nitrate, and ammonium) sea-ice ecosystem and a two-compartment (dimethylsulfoniopropionate and dimethylsulfide) sea-ice sulfur cycle which are coupled to pelagic ecosystem and sulfur-cycle models at the sea-ice–ocean interface. In addition to biological and chemical sources and sinks, the model simulates the horizontal transport of biogeochemical state variables within sea ice through a one-way coupling to a dynamic-thermodynamic sea-ice model (LIM2; the Louvain-la-Neuve Sea Ice Model version 2). The model results for 1979 (after a decadal spin-up) are presented and compared to observations and previous model studies for a brief discussion on the model performance. Furthermore, this paper provides discussion on technical aspects of implementing the sea-ice biogeochemistry and assesses the model sensitivity to (1) the temporal resolution of the snowfall forcing data, (2) the representation of light penetration through snow, (3) the horizontal transport of sea-ice biogeochemical state variables, and (4) light attenuation by ice algae. The sea-ice biogeochemical model has been developed within the generic framework of NEMO to facilitate its use within different configurations and domains, and can be adapted for use with other NEMO-based sub-models such as LIM3 (the Louvain-la-Neuve Sea Ice Model version 3) and PISCES (Pelagic Interactions Scheme for Carbon and Ecosystem Studies). Article in Journal/Newspaper Arctic ice algae Sea ice University of Tasmania: UTas ePrints Arctic Geoscientific Model Development 12 5 1965 1990
institution Open Polar
collection University of Tasmania: UTas ePrints
op_collection_id ftunivtasmania
language English
topic arctic
biogeochemistry
numerical modelling
sea ice
primary production
dimethylsulfide
spellingShingle arctic
biogeochemistry
numerical modelling
sea ice
primary production
dimethylsulfide
Hayashida, H
Christian, JR
Holdsworth, AM
Hu, X
Monahan, AH
Mortenson, E
Myers, PG
Riche, OGJ
Sou, T
Steiner, NS
CSIB v1 (Canadian Sea-ice Biogeochemistry): a sea-ice biogeochemical model for the NEMO community ocean modelling framework
topic_facet arctic
biogeochemistry
numerical modelling
sea ice
primary production
dimethylsulfide
description Process-based numerical models are a useful tool for studying marine ecosystems and associated biogeochemical processes in ice-covered regions where observations are scarce. To this end, CSIB v1 (Canadian Sea-ice Biogeochemistry version 1), a new sea-ice biogeochemical model, has been developed and embedded into the Nucleus for European Modelling of the Ocean (NEMO) modelling system. This model consists of a three-compartment (ice algae, nitrate, and ammonium) sea-ice ecosystem and a two-compartment (dimethylsulfoniopropionate and dimethylsulfide) sea-ice sulfur cycle which are coupled to pelagic ecosystem and sulfur-cycle models at the sea-ice–ocean interface. In addition to biological and chemical sources and sinks, the model simulates the horizontal transport of biogeochemical state variables within sea ice through a one-way coupling to a dynamic-thermodynamic sea-ice model (LIM2; the Louvain-la-Neuve Sea Ice Model version 2). The model results for 1979 (after a decadal spin-up) are presented and compared to observations and previous model studies for a brief discussion on the model performance. Furthermore, this paper provides discussion on technical aspects of implementing the sea-ice biogeochemistry and assesses the model sensitivity to (1) the temporal resolution of the snowfall forcing data, (2) the representation of light penetration through snow, (3) the horizontal transport of sea-ice biogeochemical state variables, and (4) light attenuation by ice algae. The sea-ice biogeochemical model has been developed within the generic framework of NEMO to facilitate its use within different configurations and domains, and can be adapted for use with other NEMO-based sub-models such as LIM3 (the Louvain-la-Neuve Sea Ice Model version 3) and PISCES (Pelagic Interactions Scheme for Carbon and Ecosystem Studies).
format Article in Journal/Newspaper
author Hayashida, H
Christian, JR
Holdsworth, AM
Hu, X
Monahan, AH
Mortenson, E
Myers, PG
Riche, OGJ
Sou, T
Steiner, NS
author_facet Hayashida, H
Christian, JR
Holdsworth, AM
Hu, X
Monahan, AH
Mortenson, E
Myers, PG
Riche, OGJ
Sou, T
Steiner, NS
author_sort Hayashida, H
title CSIB v1 (Canadian Sea-ice Biogeochemistry): a sea-ice biogeochemical model for the NEMO community ocean modelling framework
title_short CSIB v1 (Canadian Sea-ice Biogeochemistry): a sea-ice biogeochemical model for the NEMO community ocean modelling framework
title_full CSIB v1 (Canadian Sea-ice Biogeochemistry): a sea-ice biogeochemical model for the NEMO community ocean modelling framework
title_fullStr CSIB v1 (Canadian Sea-ice Biogeochemistry): a sea-ice biogeochemical model for the NEMO community ocean modelling framework
title_full_unstemmed CSIB v1 (Canadian Sea-ice Biogeochemistry): a sea-ice biogeochemical model for the NEMO community ocean modelling framework
title_sort csib v1 (canadian sea-ice biogeochemistry): a sea-ice biogeochemical model for the nemo community ocean modelling framework
publisher Copernicus GmbH
publishDate 2019
url https://eprints.utas.edu.au/42065/
https://eprints.utas.edu.au/42065/1/137169%20-%20CSIB%20v1%20%28Canadian%20Sea-ice%20Biogeochemistry%29.pdf
https://eprints.utas.edu.au/42065/2/137169%20-%20supplement.pdf
geographic Arctic
geographic_facet Arctic
genre Arctic
ice algae
Sea ice
genre_facet Arctic
ice algae
Sea ice
op_relation https://eprints.utas.edu.au/42065/1/137169%20-%20CSIB%20v1%20%28Canadian%20Sea-ice%20Biogeochemistry%29.pdf
https://eprints.utas.edu.au/42065/2/137169%20-%20supplement.pdf
Hayashida, H orcid:0000-0002-6349-4947 , Christian, JR, Holdsworth, AM, Hu, X, Monahan, AH, Mortenson, E, Myers, PG, Riche, OGJ, Sou, T and Steiner, NS 2019 , 'CSIB v1 (Canadian Sea-ice Biogeochemistry): a sea-ice biogeochemical model for the NEMO community ocean modelling framework' , Geoscientific Model Development, vol. 12 , pp. 1965-1990 , doi:10.5194/gmd-12-1965-2019 <http://dx.doi.org/10.5194/gmd-12-1965-2019>.
op_doi https://doi.org/10.5194/gmd-12-1965-2019
container_title Geoscientific Model Development
container_volume 12
container_issue 5
container_start_page 1965
op_container_end_page 1990
_version_ 1766342970374619136