Modelling habitat selection using presence-only data: Case study of a colonial hollow nesting bird, the snow petrel

Little is known on distribution and abundance of snow petrels (Pagodroma nivea) in Antarctica. Studying habitat selection through modelling may provide useful information on the relationships between this species and its environment, especially on potential effects of climate change as modifications...

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Published in:Ecological Modelling
Main Authors: Olivier, F, Wotherspoon, SJ
Format: Article in Journal/Newspaper
Language:English
Published: Elsevier Science BV 2006
Subjects:
Online Access:https://doi.org/10.1016/j.ecolmodel.2005.10.036
http://ecite.utas.edu.au/37846
id ftunivtasecite:oai:ecite.utas.edu.au:37846
record_format openpolar
spelling ftunivtasecite:oai:ecite.utas.edu.au:37846 2023-05-15T14:03:55+02:00 Modelling habitat selection using presence-only data: Case study of a colonial hollow nesting bird, the snow petrel Olivier, F Wotherspoon, SJ 2006 https://doi.org/10.1016/j.ecolmodel.2005.10.036 http://ecite.utas.edu.au/37846 en eng Elsevier Science BV http://dx.doi.org/10.1016/j.ecolmodel.2005.10.036 Olivier, F and Wotherspoon, SJ, Modelling habitat selection using presence-only data: Case study of a colonial hollow nesting bird, the snow petrel, Ecological Modelling, 195, (3-4) pp. 187-204. ISSN 0304-3800 (2006) [Refereed Article] http://ecite.utas.edu.au/37846 Earth Sciences Physical Geography and Environmental Geoscience Glaciology Refereed Article PeerReviewed 2006 ftunivtasecite https://doi.org/10.1016/j.ecolmodel.2005.10.036 2019-12-13T21:15:43Z Little is known on distribution and abundance of snow petrels (Pagodroma nivea) in Antarctica. Studying habitat selection through modelling may provide useful information on the relationships between this species and its environment, especially on potential effects of climate change as modifications of nest sites availability and/or quality may arise in the long term. Based on surveys of the Windmill Islands during summer 2002-2003, several types of habitat suitability models were tested to relate the location of 4000 snow petrel nests with a set of environmental predictors describing rock substrate and topography, which proved useful predictors to identify favourable habitat for snow petrels. GAMs were used in the exploratory phase of the analyses, guiding the parametrization of GLMs, complemented by CT models. All three models rely on randomly generated pseudo-absence points. Their predictive performance was compared to that of a fundamentally different model using presence-only data, ENFA. Based on environmental envelopes, ENFA proved slightly less accurate than GLMs, given the available input data. However, ENFA predictions provide a useful starting point to categorize habitat suitability prior to the application of other modelling techniques. All models were ameliorated by the addition of predictors accounting for the spatial clustering of nests, but are of limited use to predict nest distribution in new areas. Clustering was caused by both coloniality and the underlying spatial structure of the substrate, which constrained nest densities through the distribution of available nest sites. Models fitted only with environmental predictors were refined when random points were separated from nest aggregations with a buffer scaled to the average size of colonies (identified with a simulation). Buffering was redundant for the models including neighbour information. Overall, when fitting models with presence-only data points, improvements are obtained when accounting for the spatial clustering of the species. Given the highly specific nesting requirements of snow petrels, the observed nest clustering may be more constrained by the availability of suitable nests sites rather than driven by conspecific attraction, which emphasizes the importance of microhabitat quality in the habitat selection process. 2005 Elsevier B.V. All rights reserved. Article in Journal/Newspaper Antarc* Antarctica Snow Petrel Snow Petrels Windmill Islands eCite UTAS (University of Tasmania) Nivea ENVELOPE(-45.479,-45.479,-60.580,-60.580) Windmill Islands ENVELOPE(110.417,110.417,-66.350,-66.350) Ecological Modelling 195 3-4 187 204
institution Open Polar
collection eCite UTAS (University of Tasmania)
op_collection_id ftunivtasecite
language English
topic Earth Sciences
Physical Geography and Environmental Geoscience
Glaciology
spellingShingle Earth Sciences
Physical Geography and Environmental Geoscience
Glaciology
Olivier, F
Wotherspoon, SJ
Modelling habitat selection using presence-only data: Case study of a colonial hollow nesting bird, the snow petrel
topic_facet Earth Sciences
Physical Geography and Environmental Geoscience
Glaciology
description Little is known on distribution and abundance of snow petrels (Pagodroma nivea) in Antarctica. Studying habitat selection through modelling may provide useful information on the relationships between this species and its environment, especially on potential effects of climate change as modifications of nest sites availability and/or quality may arise in the long term. Based on surveys of the Windmill Islands during summer 2002-2003, several types of habitat suitability models were tested to relate the location of 4000 snow petrel nests with a set of environmental predictors describing rock substrate and topography, which proved useful predictors to identify favourable habitat for snow petrels. GAMs were used in the exploratory phase of the analyses, guiding the parametrization of GLMs, complemented by CT models. All three models rely on randomly generated pseudo-absence points. Their predictive performance was compared to that of a fundamentally different model using presence-only data, ENFA. Based on environmental envelopes, ENFA proved slightly less accurate than GLMs, given the available input data. However, ENFA predictions provide a useful starting point to categorize habitat suitability prior to the application of other modelling techniques. All models were ameliorated by the addition of predictors accounting for the spatial clustering of nests, but are of limited use to predict nest distribution in new areas. Clustering was caused by both coloniality and the underlying spatial structure of the substrate, which constrained nest densities through the distribution of available nest sites. Models fitted only with environmental predictors were refined when random points were separated from nest aggregations with a buffer scaled to the average size of colonies (identified with a simulation). Buffering was redundant for the models including neighbour information. Overall, when fitting models with presence-only data points, improvements are obtained when accounting for the spatial clustering of the species. Given the highly specific nesting requirements of snow petrels, the observed nest clustering may be more constrained by the availability of suitable nests sites rather than driven by conspecific attraction, which emphasizes the importance of microhabitat quality in the habitat selection process. 2005 Elsevier B.V. All rights reserved.
format Article in Journal/Newspaper
author Olivier, F
Wotherspoon, SJ
author_facet Olivier, F
Wotherspoon, SJ
author_sort Olivier, F
title Modelling habitat selection using presence-only data: Case study of a colonial hollow nesting bird, the snow petrel
title_short Modelling habitat selection using presence-only data: Case study of a colonial hollow nesting bird, the snow petrel
title_full Modelling habitat selection using presence-only data: Case study of a colonial hollow nesting bird, the snow petrel
title_fullStr Modelling habitat selection using presence-only data: Case study of a colonial hollow nesting bird, the snow petrel
title_full_unstemmed Modelling habitat selection using presence-only data: Case study of a colonial hollow nesting bird, the snow petrel
title_sort modelling habitat selection using presence-only data: case study of a colonial hollow nesting bird, the snow petrel
publisher Elsevier Science BV
publishDate 2006
url https://doi.org/10.1016/j.ecolmodel.2005.10.036
http://ecite.utas.edu.au/37846
long_lat ENVELOPE(-45.479,-45.479,-60.580,-60.580)
ENVELOPE(110.417,110.417,-66.350,-66.350)
geographic Nivea
Windmill Islands
geographic_facet Nivea
Windmill Islands
genre Antarc*
Antarctica
Snow Petrel
Snow Petrels
Windmill Islands
genre_facet Antarc*
Antarctica
Snow Petrel
Snow Petrels
Windmill Islands
op_relation http://dx.doi.org/10.1016/j.ecolmodel.2005.10.036
Olivier, F and Wotherspoon, SJ, Modelling habitat selection using presence-only data: Case study of a colonial hollow nesting bird, the snow petrel, Ecological Modelling, 195, (3-4) pp. 187-204. ISSN 0304-3800 (2006) [Refereed Article]
http://ecite.utas.edu.au/37846
op_doi https://doi.org/10.1016/j.ecolmodel.2005.10.036
container_title Ecological Modelling
container_volume 195
container_issue 3-4
container_start_page 187
op_container_end_page 204
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