Genetic diversity and population structure of the Antarctic toothfish, Dissostichus mawsoni , using mitochondrial and microsatellite DNA markers

The Antarctic toothfish, Dissostichus mawsoni , serves as a valuable fishery resource around the Antarctic Continent since 1997, managed by the Commission for the Conservation of Antarctic Marine Living Resources (CCAMLR). Although delineating genetic or stock structure of populations is crucial for...

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Published in:Frontiers in Marine Science
Main Authors: Choi, HK, Jang, JE, Byeon, SY, Kim, YR, Maschette, D, Chung, S, Choi, SG, Kim, HW, Lee, HJ
Format: Article in Journal/Newspaper
Language:English
Published: Frontiers Research Foundation 2021
Subjects:
Online Access:https://doi.org/10.3389/fmars.2021.666417
http://ecite.utas.edu.au/151362
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spelling ftunivtasecite:oai:ecite.utas.edu.au:151362 2023-05-15T13:59:47+02:00 Genetic diversity and population structure of the Antarctic toothfish, Dissostichus mawsoni , using mitochondrial and microsatellite DNA markers Choi, HK Jang, JE Byeon, SY Kim, YR Maschette, D Chung, S Choi, SG Kim, HW Lee, HJ 2021 application/pdf https://doi.org/10.3389/fmars.2021.666417 http://ecite.utas.edu.au/151362 en eng Frontiers Research Foundation http://ecite.utas.edu.au/151362/1/151362 - Genetic diversity and population structure of the Antarctic toothfish.pdf http://dx.doi.org/10.3389/fmars.2021.666417 Choi, HK and Jang, JE and Byeon, SY and Kim, YR and Maschette, D and Chung, S and Choi, SG and Kim, HW and Lee, HJ, Genetic diversity and population structure of the Antarctic toothfish, Dissostichus mawsoni , using mitochondrial and microsatellite DNA markers, Frontiers in Marine Science, 8 Article 666417. ISSN 2296-7745 (2021) [Refereed Article] http://ecite.utas.edu.au/151362 Agricultural Veterinary and Food Sciences Fisheries sciences Fisheries management Refereed Article PeerReviewed 2021 ftunivtasecite https://doi.org/10.3389/fmars.2021.666417 2022-08-15T22:16:43Z The Antarctic toothfish, Dissostichus mawsoni , serves as a valuable fishery resource around the Antarctic Continent since 1997, managed by the Commission for the Conservation of Antarctic Marine Living Resources (CCAMLR). Although delineating genetic or stock structure of populations is crucial for improving fishery management of this species, its number of genetic populations and genetic diversity levels remain ambiguous. In the present study, we assessed the population genetic and phylogeographic structure of the Antarctic toothfish across 20 geographic localities spanning from Subareas 88 (88.1, 88.2, and 88.3) to Subareas 58 (58.4 and 58.5) by using mitochondrial DNA (mtDNA) cytochrome oxidase I (COI) and 16S rRNA (16S) sequences and seven nuclear microsatellite loci. MtDNA revealed a low level of polymorphism ( h = 0.571, π = 0.0006) with 40 haplotypes in 392 individuals, connected only by 15 mutational steps, which is indicative of shallow evolutionary history. Microsatellites showed a range of allelic richness (AR) from 6.328 (88.3 RB3) to 7.274 (88.3 RB6) within populations. Overall genetic diversity was generally higher in Subareas 58 than in Subareas 88, suggesting that effective population size (N E ) is larger in Subareas 58. The results of population analyses using microsatellites suggest that the sampled populations are likely to comprise a well-admixed single gene pool (i.e., one genetic stock), perhaps due to high contemporary gene flow occurring during the prolonged larval phase of this fish. However, given weak, but significant microsatellite differentiation found in six population-pairs, the possibility of existence of multiple genetic populations could not be completely excluded. The mtDNA AMOVA suggests a genetic break between the Subareas 88 and 58 groups ( F CT = 0.011, P = 0.004). Moreover, mtDNA genetic distances ( F ST ) between populations were proportionally greater as geographic distances increase. The patterns of isolation by distance (IBD) shown only in mtDNA, but not in ... Article in Journal/Newspaper Antarc* Antarctic Antarctic Toothfish eCite UTAS (University of Tasmania) Antarctic The Antarctic Frontiers in Marine Science 8
institution Open Polar
collection eCite UTAS (University of Tasmania)
op_collection_id ftunivtasecite
language English
topic Agricultural
Veterinary and Food Sciences
Fisheries sciences
Fisheries management
spellingShingle Agricultural
Veterinary and Food Sciences
Fisheries sciences
Fisheries management
Choi, HK
Jang, JE
Byeon, SY
Kim, YR
Maschette, D
Chung, S
Choi, SG
Kim, HW
Lee, HJ
Genetic diversity and population structure of the Antarctic toothfish, Dissostichus mawsoni , using mitochondrial and microsatellite DNA markers
topic_facet Agricultural
Veterinary and Food Sciences
Fisheries sciences
Fisheries management
description The Antarctic toothfish, Dissostichus mawsoni , serves as a valuable fishery resource around the Antarctic Continent since 1997, managed by the Commission for the Conservation of Antarctic Marine Living Resources (CCAMLR). Although delineating genetic or stock structure of populations is crucial for improving fishery management of this species, its number of genetic populations and genetic diversity levels remain ambiguous. In the present study, we assessed the population genetic and phylogeographic structure of the Antarctic toothfish across 20 geographic localities spanning from Subareas 88 (88.1, 88.2, and 88.3) to Subareas 58 (58.4 and 58.5) by using mitochondrial DNA (mtDNA) cytochrome oxidase I (COI) and 16S rRNA (16S) sequences and seven nuclear microsatellite loci. MtDNA revealed a low level of polymorphism ( h = 0.571, π = 0.0006) with 40 haplotypes in 392 individuals, connected only by 15 mutational steps, which is indicative of shallow evolutionary history. Microsatellites showed a range of allelic richness (AR) from 6.328 (88.3 RB3) to 7.274 (88.3 RB6) within populations. Overall genetic diversity was generally higher in Subareas 58 than in Subareas 88, suggesting that effective population size (N E ) is larger in Subareas 58. The results of population analyses using microsatellites suggest that the sampled populations are likely to comprise a well-admixed single gene pool (i.e., one genetic stock), perhaps due to high contemporary gene flow occurring during the prolonged larval phase of this fish. However, given weak, but significant microsatellite differentiation found in six population-pairs, the possibility of existence of multiple genetic populations could not be completely excluded. The mtDNA AMOVA suggests a genetic break between the Subareas 88 and 58 groups ( F CT = 0.011, P = 0.004). Moreover, mtDNA genetic distances ( F ST ) between populations were proportionally greater as geographic distances increase. The patterns of isolation by distance (IBD) shown only in mtDNA, but not in ...
format Article in Journal/Newspaper
author Choi, HK
Jang, JE
Byeon, SY
Kim, YR
Maschette, D
Chung, S
Choi, SG
Kim, HW
Lee, HJ
author_facet Choi, HK
Jang, JE
Byeon, SY
Kim, YR
Maschette, D
Chung, S
Choi, SG
Kim, HW
Lee, HJ
author_sort Choi, HK
title Genetic diversity and population structure of the Antarctic toothfish, Dissostichus mawsoni , using mitochondrial and microsatellite DNA markers
title_short Genetic diversity and population structure of the Antarctic toothfish, Dissostichus mawsoni , using mitochondrial and microsatellite DNA markers
title_full Genetic diversity and population structure of the Antarctic toothfish, Dissostichus mawsoni , using mitochondrial and microsatellite DNA markers
title_fullStr Genetic diversity and population structure of the Antarctic toothfish, Dissostichus mawsoni , using mitochondrial and microsatellite DNA markers
title_full_unstemmed Genetic diversity and population structure of the Antarctic toothfish, Dissostichus mawsoni , using mitochondrial and microsatellite DNA markers
title_sort genetic diversity and population structure of the antarctic toothfish, dissostichus mawsoni , using mitochondrial and microsatellite dna markers
publisher Frontiers Research Foundation
publishDate 2021
url https://doi.org/10.3389/fmars.2021.666417
http://ecite.utas.edu.au/151362
geographic Antarctic
The Antarctic
geographic_facet Antarctic
The Antarctic
genre Antarc*
Antarctic
Antarctic Toothfish
genre_facet Antarc*
Antarctic
Antarctic Toothfish
op_relation http://ecite.utas.edu.au/151362/1/151362 - Genetic diversity and population structure of the Antarctic toothfish.pdf
http://dx.doi.org/10.3389/fmars.2021.666417
Choi, HK and Jang, JE and Byeon, SY and Kim, YR and Maschette, D and Chung, S and Choi, SG and Kim, HW and Lee, HJ, Genetic diversity and population structure of the Antarctic toothfish, Dissostichus mawsoni , using mitochondrial and microsatellite DNA markers, Frontiers in Marine Science, 8 Article 666417. ISSN 2296-7745 (2021) [Refereed Article]
http://ecite.utas.edu.au/151362
op_doi https://doi.org/10.3389/fmars.2021.666417
container_title Frontiers in Marine Science
container_volume 8
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