Six new Krithe from the Kuril-Kamchatka Trench, with the first insight into phylogeography of deep-sea ostracods

Hadal depths are one of the least explored ecosystems on the planet, with little data on biodiversity and even less on phylogegraphy of its inhabitants, especially of meiofaunal groups. Ostracods are an important component of meiofaunal communities, but with less than a dozen species described from...

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Published in:Progress in Oceanography
Main Authors: Yoo, H, Tanaka, H, Lee, W, Brandao, SN, Karanovic, I
Format: Article in Journal/Newspaper
Language:English
Published: Pergamon-Elsevier Science Ltd 2019
Subjects:
Online Access:https://doi.org/10.1016/j.pocean.2019.102128
http://ecite.utas.edu.au/134977
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spelling ftunivtasecite:oai:ecite.utas.edu.au:134977 2023-05-15T16:59:13+02:00 Six new Krithe from the Kuril-Kamchatka Trench, with the first insight into phylogeography of deep-sea ostracods Yoo, H Tanaka, H Lee, W Brandao, SN Karanovic, I 2019 https://doi.org/10.1016/j.pocean.2019.102128 http://ecite.utas.edu.au/134977 en eng Pergamon-Elsevier Science Ltd http://dx.doi.org/10.1016/j.pocean.2019.102128 Yoo, H and Tanaka, H and Lee, W and Brandao, SN and Karanovic, I, Six new Krithe from the Kuril-Kamchatka Trench, with the first insight into phylogeography of deep-sea ostracods, Progress in Oceanography, 176 Article 102128. ISSN 0079-6611 (2019) [Refereed Article] http://ecite.utas.edu.au/134977 Biological Sciences Evolutionary Biology Animal Systematics and Taxonomy Refereed Article PeerReviewed 2019 ftunivtasecite https://doi.org/10.1016/j.pocean.2019.102128 2020-01-13T23:16:16Z Hadal depths are one of the least explored ecosystems on the planet, with little data on biodiversity and even less on phylogegraphy of its inhabitants, especially of meiofaunal groups. Ostracods are an important component of meiofaunal communities, but with less than a dozen species described from the worlds ocean trenches. Therefore, six species we describe from the Kuril-Kamchatka Trench greatly contribute to our knowledge of the hadal ostracod fauna. The new species belong to the genus Krithe Brady, Crosskey a Robertson, 1874, one of the most common ostracod genera from the continental slopes to abyss. Most of the 150 named species are fossil or subrecent, and described from shells only. Our discovery brings the list of species with known soft parts to 11, and provides further insights into morphology of these small ostracods. Our analysis shows that sexual dimorphism in the sixth leg should be excluded from the generic diagnosis. A relatively high abundance and wide distribution of the new species allowed us to study phylogeny (including estimation of the divergence time), genetic diversity, and phylogeography, providing the first such data for ostracods and one of the rare ones for all meiofaunal hadal (but also general deep-sea) groups. We use three genetic markers: mitochondrial cytochrome oxidase I (COI), internal transcribed spaces (ITS), and 18S rRNA; COI and ITS contained enough variability for the molecular phylogeny, and the former one for the population genetics and phylogeography analyses. Molecular clock analysis suggests that the most recent common ancestor (MRCA) of the six species lived 13 million years ago, supporting previously published estimates that the hadal fauna is relatively young. A high haplotype diversity coupled with a low nucleotide diversity are indicative of a rapid population expansion from a small effective population size. This is also supported with negative, statistically significant, values of Tajimas D and Fus tests. Bayesian Skyline Plot places the time of expansion in the last interglacial period (120,000 years ago) and corresponds to the influx of cold, nutrient rich waters of the Oyashio current. The isolation by distance model is rejected, and almost non-existent population structuring is supported by a combination of low Fst values, and often a higher number of mutational changes between haplotypes sampled at the same locality than between those from different localities. Article in Journal/Newspaper Kamchatka eCite UTAS (University of Tasmania) Oyashio ENVELOPE(157.000,157.000,50.000,50.000) Progress in Oceanography 176 102128
institution Open Polar
collection eCite UTAS (University of Tasmania)
op_collection_id ftunivtasecite
language English
topic Biological Sciences
Evolutionary Biology
Animal Systematics and Taxonomy
spellingShingle Biological Sciences
Evolutionary Biology
Animal Systematics and Taxonomy
Yoo, H
Tanaka, H
Lee, W
Brandao, SN
Karanovic, I
Six new Krithe from the Kuril-Kamchatka Trench, with the first insight into phylogeography of deep-sea ostracods
topic_facet Biological Sciences
Evolutionary Biology
Animal Systematics and Taxonomy
description Hadal depths are one of the least explored ecosystems on the planet, with little data on biodiversity and even less on phylogegraphy of its inhabitants, especially of meiofaunal groups. Ostracods are an important component of meiofaunal communities, but with less than a dozen species described from the worlds ocean trenches. Therefore, six species we describe from the Kuril-Kamchatka Trench greatly contribute to our knowledge of the hadal ostracod fauna. The new species belong to the genus Krithe Brady, Crosskey a Robertson, 1874, one of the most common ostracod genera from the continental slopes to abyss. Most of the 150 named species are fossil or subrecent, and described from shells only. Our discovery brings the list of species with known soft parts to 11, and provides further insights into morphology of these small ostracods. Our analysis shows that sexual dimorphism in the sixth leg should be excluded from the generic diagnosis. A relatively high abundance and wide distribution of the new species allowed us to study phylogeny (including estimation of the divergence time), genetic diversity, and phylogeography, providing the first such data for ostracods and one of the rare ones for all meiofaunal hadal (but also general deep-sea) groups. We use three genetic markers: mitochondrial cytochrome oxidase I (COI), internal transcribed spaces (ITS), and 18S rRNA; COI and ITS contained enough variability for the molecular phylogeny, and the former one for the population genetics and phylogeography analyses. Molecular clock analysis suggests that the most recent common ancestor (MRCA) of the six species lived 13 million years ago, supporting previously published estimates that the hadal fauna is relatively young. A high haplotype diversity coupled with a low nucleotide diversity are indicative of a rapid population expansion from a small effective population size. This is also supported with negative, statistically significant, values of Tajimas D and Fus tests. Bayesian Skyline Plot places the time of expansion in the last interglacial period (120,000 years ago) and corresponds to the influx of cold, nutrient rich waters of the Oyashio current. The isolation by distance model is rejected, and almost non-existent population structuring is supported by a combination of low Fst values, and often a higher number of mutational changes between haplotypes sampled at the same locality than between those from different localities.
format Article in Journal/Newspaper
author Yoo, H
Tanaka, H
Lee, W
Brandao, SN
Karanovic, I
author_facet Yoo, H
Tanaka, H
Lee, W
Brandao, SN
Karanovic, I
author_sort Yoo, H
title Six new Krithe from the Kuril-Kamchatka Trench, with the first insight into phylogeography of deep-sea ostracods
title_short Six new Krithe from the Kuril-Kamchatka Trench, with the first insight into phylogeography of deep-sea ostracods
title_full Six new Krithe from the Kuril-Kamchatka Trench, with the first insight into phylogeography of deep-sea ostracods
title_fullStr Six new Krithe from the Kuril-Kamchatka Trench, with the first insight into phylogeography of deep-sea ostracods
title_full_unstemmed Six new Krithe from the Kuril-Kamchatka Trench, with the first insight into phylogeography of deep-sea ostracods
title_sort six new krithe from the kuril-kamchatka trench, with the first insight into phylogeography of deep-sea ostracods
publisher Pergamon-Elsevier Science Ltd
publishDate 2019
url https://doi.org/10.1016/j.pocean.2019.102128
http://ecite.utas.edu.au/134977
long_lat ENVELOPE(157.000,157.000,50.000,50.000)
geographic Oyashio
geographic_facet Oyashio
genre Kamchatka
genre_facet Kamchatka
op_relation http://dx.doi.org/10.1016/j.pocean.2019.102128
Yoo, H and Tanaka, H and Lee, W and Brandao, SN and Karanovic, I, Six new Krithe from the Kuril-Kamchatka Trench, with the first insight into phylogeography of deep-sea ostracods, Progress in Oceanography, 176 Article 102128. ISSN 0079-6611 (2019) [Refereed Article]
http://ecite.utas.edu.au/134977
op_doi https://doi.org/10.1016/j.pocean.2019.102128
container_title Progress in Oceanography
container_volume 176
container_start_page 102128
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