Shewanella gelidimarina sp. nov. and Shewanella frigidimarina sp. nov., novel Antarctic species with the ability to produce eicosapentaenoic acid (20:5 omega 3) and grow anaerobically by dissimilatory Fe(III) reduction

A polyphasic taxonomic study was performed to characterize dissimilatory iron-reducing strains mostly isolated from Antarctic sea ice. The strains were isolated from samples of congelated (land-fast) sea ice, grease ice, and ice algal biomass collected from the coastal areas of the Vestfold Hills in...

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Published in:International Journal of Systematic Bacteriology
Main Authors: Bowman, JP, McCammon, SA, Nichols, DS, Skerratt, J, Rea, SM, Nichols, PD, McMeekin, TA
Format: Article in Journal/Newspaper
Language:English
Published: Society for General Microbiology 1997
Subjects:
Online Access:https://doi.org/10.1099/00207713-47-4-1040
http://www.ncbi.nlm.nih.gov/pubmed/9336903
http://ecite.utas.edu.au/10403
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spelling ftunivtasecite:oai:ecite.utas.edu.au:10403 2023-05-15T13:56:40+02:00 Shewanella gelidimarina sp. nov. and Shewanella frigidimarina sp. nov., novel Antarctic species with the ability to produce eicosapentaenoic acid (20:5 omega 3) and grow anaerobically by dissimilatory Fe(III) reduction Bowman, JP McCammon, SA Nichols, DS Skerratt, J Rea, SM Nichols, PD McMeekin, TA 1997 https://doi.org/10.1099/00207713-47-4-1040 http://www.ncbi.nlm.nih.gov/pubmed/9336903 http://ecite.utas.edu.au/10403 en eng Society for General Microbiology http://dx.doi.org/10.1099/00207713-47-4-1040 Bowman, JP and McCammon, SA and Nichols, DS and Skerratt, J and Rea, SM and Nichols, PD and McMeekin, TA, Shewanella gelidimarina sp. nov. and Shewanella frigidimarina sp. nov., novel Antarctic species with the ability to produce eicosapentaenoic acid (20:5 omega 3) and grow anaerobically by dissimilatory Fe(III) reduction, International Journal of Systematic Bacteriology, 47, (4) pp. 1040-1047. ISSN 0020-7713 (1997) [Refereed Article] http://www.ncbi.nlm.nih.gov/pubmed/9336903 http://ecite.utas.edu.au/10403 Biological Sciences Microbiology Bacteriology Refereed Article PeerReviewed 1997 ftunivtasecite https://doi.org/10.1099/00207713-47-4-1040 2019-12-13T20:55:55Z A polyphasic taxonomic study was performed to characterize dissimilatory iron-reducing strains mostly isolated from Antarctic sea ice. The strains were isolated from samples of congelated (land-fast) sea ice, grease ice, and ice algal biomass collected from the coastal areas of the Vestfold Hills in eastern Antarctica (68S 78E). The strains were facultatively anaerobic, motile, and rod shaped, were capable of anaerobic growth either by fermentation of carbohydrates or by anaerobic respiration, and utilized a variety of electron acceptors, including nitrate, ferric compounds, and trimethylamine N-oxide. A phylogenetic analysis performed with 16S rRNA sequences showed that the isolates formed two groups representing novel lineages in the genus Shewanella. The first novel group included seawater- requiring, psychrophilic, chitinolytic strains which had DNA G+C contents of 48 tool%. The members of the second strain group were psychrotrophic and did not require seawater but could tolerate up to 9% NaCI. The strains of this group were also unable to degrade polysaccharides but could utilize a number of monosaccharides and disaccharides and had G+C contents of 40 to 43 tool%. The whole-cell-derived fatty acid profiles of the sea ice isolates were found to be similar to the profiles obtained for other Shewanella species. The omega-3 polyunsaturated fatty acid eicosapentaenoic acid (EPA) (20:53) was detected in all of the sea ice isolates at levels ranging from 2 to 16% of the total fatty acids. EPA was also found at high levels in Shewanella hanedai (19 to 22%) and Shewanella benthica (16 to 18%) but was absent in Shewanella alga and Shewanellla putrefaeiens. On the basis of polyphasic taxonomic data, the Antarctic iron-reducing strains are placed in two new species, Shewanella fridimarina sp. nov. (type strain, ACAM 591) and Shewanella gelidimarina sp. nov. (type strain, ACAM 456). Article in Journal/Newspaper Antarc* Antarctic Antarctica Sea ice eCite UTAS (University of Tasmania) Antarctic The Antarctic Vestfold Vestfold Hills International Journal of Systematic Bacteriology 47 4 1040 1047
institution Open Polar
collection eCite UTAS (University of Tasmania)
op_collection_id ftunivtasecite
language English
topic Biological Sciences
Microbiology
Bacteriology
spellingShingle Biological Sciences
Microbiology
Bacteriology
Bowman, JP
McCammon, SA
Nichols, DS
Skerratt, J
Rea, SM
Nichols, PD
McMeekin, TA
Shewanella gelidimarina sp. nov. and Shewanella frigidimarina sp. nov., novel Antarctic species with the ability to produce eicosapentaenoic acid (20:5 omega 3) and grow anaerobically by dissimilatory Fe(III) reduction
topic_facet Biological Sciences
Microbiology
Bacteriology
description A polyphasic taxonomic study was performed to characterize dissimilatory iron-reducing strains mostly isolated from Antarctic sea ice. The strains were isolated from samples of congelated (land-fast) sea ice, grease ice, and ice algal biomass collected from the coastal areas of the Vestfold Hills in eastern Antarctica (68S 78E). The strains were facultatively anaerobic, motile, and rod shaped, were capable of anaerobic growth either by fermentation of carbohydrates or by anaerobic respiration, and utilized a variety of electron acceptors, including nitrate, ferric compounds, and trimethylamine N-oxide. A phylogenetic analysis performed with 16S rRNA sequences showed that the isolates formed two groups representing novel lineages in the genus Shewanella. The first novel group included seawater- requiring, psychrophilic, chitinolytic strains which had DNA G+C contents of 48 tool%. The members of the second strain group were psychrotrophic and did not require seawater but could tolerate up to 9% NaCI. The strains of this group were also unable to degrade polysaccharides but could utilize a number of monosaccharides and disaccharides and had G+C contents of 40 to 43 tool%. The whole-cell-derived fatty acid profiles of the sea ice isolates were found to be similar to the profiles obtained for other Shewanella species. The omega-3 polyunsaturated fatty acid eicosapentaenoic acid (EPA) (20:53) was detected in all of the sea ice isolates at levels ranging from 2 to 16% of the total fatty acids. EPA was also found at high levels in Shewanella hanedai (19 to 22%) and Shewanella benthica (16 to 18%) but was absent in Shewanella alga and Shewanellla putrefaeiens. On the basis of polyphasic taxonomic data, the Antarctic iron-reducing strains are placed in two new species, Shewanella fridimarina sp. nov. (type strain, ACAM 591) and Shewanella gelidimarina sp. nov. (type strain, ACAM 456).
format Article in Journal/Newspaper
author Bowman, JP
McCammon, SA
Nichols, DS
Skerratt, J
Rea, SM
Nichols, PD
McMeekin, TA
author_facet Bowman, JP
McCammon, SA
Nichols, DS
Skerratt, J
Rea, SM
Nichols, PD
McMeekin, TA
author_sort Bowman, JP
title Shewanella gelidimarina sp. nov. and Shewanella frigidimarina sp. nov., novel Antarctic species with the ability to produce eicosapentaenoic acid (20:5 omega 3) and grow anaerobically by dissimilatory Fe(III) reduction
title_short Shewanella gelidimarina sp. nov. and Shewanella frigidimarina sp. nov., novel Antarctic species with the ability to produce eicosapentaenoic acid (20:5 omega 3) and grow anaerobically by dissimilatory Fe(III) reduction
title_full Shewanella gelidimarina sp. nov. and Shewanella frigidimarina sp. nov., novel Antarctic species with the ability to produce eicosapentaenoic acid (20:5 omega 3) and grow anaerobically by dissimilatory Fe(III) reduction
title_fullStr Shewanella gelidimarina sp. nov. and Shewanella frigidimarina sp. nov., novel Antarctic species with the ability to produce eicosapentaenoic acid (20:5 omega 3) and grow anaerobically by dissimilatory Fe(III) reduction
title_full_unstemmed Shewanella gelidimarina sp. nov. and Shewanella frigidimarina sp. nov., novel Antarctic species with the ability to produce eicosapentaenoic acid (20:5 omega 3) and grow anaerobically by dissimilatory Fe(III) reduction
title_sort shewanella gelidimarina sp. nov. and shewanella frigidimarina sp. nov., novel antarctic species with the ability to produce eicosapentaenoic acid (20:5 omega 3) and grow anaerobically by dissimilatory fe(iii) reduction
publisher Society for General Microbiology
publishDate 1997
url https://doi.org/10.1099/00207713-47-4-1040
http://www.ncbi.nlm.nih.gov/pubmed/9336903
http://ecite.utas.edu.au/10403
geographic Antarctic
The Antarctic
Vestfold
Vestfold Hills
geographic_facet Antarctic
The Antarctic
Vestfold
Vestfold Hills
genre Antarc*
Antarctic
Antarctica
Sea ice
genre_facet Antarc*
Antarctic
Antarctica
Sea ice
op_relation http://dx.doi.org/10.1099/00207713-47-4-1040
Bowman, JP and McCammon, SA and Nichols, DS and Skerratt, J and Rea, SM and Nichols, PD and McMeekin, TA, Shewanella gelidimarina sp. nov. and Shewanella frigidimarina sp. nov., novel Antarctic species with the ability to produce eicosapentaenoic acid (20:5 omega 3) and grow anaerobically by dissimilatory Fe(III) reduction, International Journal of Systematic Bacteriology, 47, (4) pp. 1040-1047. ISSN 0020-7713 (1997) [Refereed Article]
http://www.ncbi.nlm.nih.gov/pubmed/9336903
http://ecite.utas.edu.au/10403
op_doi https://doi.org/10.1099/00207713-47-4-1040
container_title International Journal of Systematic Bacteriology
container_volume 47
container_issue 4
container_start_page 1040
op_container_end_page 1047
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