An evolutionary perspective on Elovl5 fatty acid elongase: comparison of Northern pike and duplicated paralogs from Atlantic salmon

BACKGROUND The ability to produce physiologically critical LC-PUFA from dietary fatty acids differs greatly among teleost species, and is dependent on the possession and expression of fatty acyl desaturase and elongase genes. Atlantic salmon, as a result of a recently duplicated genome, have more of...

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Published in:BMC Evolutionary Biology
Main Authors: Carmona-Antonanzas, Greta, Tocher, Douglas R, Taggart, John, Leaver, Michael
Other Authors: Institute of Aquaculture, orcid:0000-0002-8603-9410, orcid:0000-0002-3843-9663, orcid:0000-0002-3155-0844
Format: Article in Journal/Newspaper
Language:English
Published: BioMed Central Ltd 2013
Subjects:
Online Access:http://hdl.handle.net/1893/17869
https://doi.org/10.1186/1471-2148-13-85
http://dspace.stir.ac.uk/bitstream/1893/17869/1/An%20evolutionary%20perspective%20on%20Elovl5%20fatty%20acid%20elongase.pdf
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spelling ftunivstirling:oai:dspace.stir.ac.uk:1893/17869 2023-05-15T15:29:58+02:00 An evolutionary perspective on Elovl5 fatty acid elongase: comparison of Northern pike and duplicated paralogs from Atlantic salmon Carmona-Antonanzas, Greta Tocher, Douglas R Taggart, John Leaver, Michael Institute of Aquaculture orcid:0000-0002-8603-9410 orcid:0000-0002-3843-9663 orcid:0000-0002-3155-0844 2013-04 application/pdf http://hdl.handle.net/1893/17869 https://doi.org/10.1186/1471-2148-13-85 http://dspace.stir.ac.uk/bitstream/1893/17869/1/An%20evolutionary%20perspective%20on%20Elovl5%20fatty%20acid%20elongase.pdf en eng BioMed Central Ltd Carmona-Antonanzas G, Tocher DR, Taggart J & Leaver M (2013) An evolutionary perspective on Elovl5 fatty acid elongase: comparison of Northern pike and duplicated paralogs from Atlantic salmon. BMC Evolutionary Biology, 13, Art. No.: 85. https://doi.org/10.1186/1471-2148-13-85 85 http://hdl.handle.net/1893/17869 doi:10.1186/1471-2148-13-85 23597093 WOS:000318368500001 2-s2.0-84876290563 676259 http://dspace.stir.ac.uk/bitstream/1893/17869/1/An%20evolutionary%20perspective%20on%20Elovl5%20fatty%20acid%20elongase.pdf © 2013 Carmona-Antoñanzas et al.; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. http://creativecommons.org/licenses/by/4.0/ CC-BY Atlantic salmon Elongase of very long-chain fatty acids Northern pike Paralogous genes Whole-genome duplication Journal Article VoR - Version of Record 2013 ftunivstirling https://doi.org/10.1186/1471-2148-13-85 2022-06-13T18:45:37Z BACKGROUND The ability to produce physiologically critical LC-PUFA from dietary fatty acids differs greatly among teleost species, and is dependent on the possession and expression of fatty acyl desaturase and elongase genes. Atlantic salmon, as a result of a recently duplicated genome, have more of these enzymes than other fish. Recent phylogenetic studies show that Northern pike represents the closest extant relative of the preduplicated ancestral salmonid. Here we characterise a pike fatty acyl elongase, elovl5, and compare it to Atlantic salmon elovl5a and elovl5b duplicates. RESULTS Phylogenetic analyses show that Atlantic salmon paralogs are evolving symmetrically, and they have been retained in the genome by purifying selection. Heterologous expression in yeast showed that Northern pike Elovl5 activity is indistinguishable from that of the salmon paralogs, efficiently elongating C18 and C20 substrates. However, in contrast to salmon, pike elovl5 was predominantly expressed in brain with negligible expression in liver and intestine. CONCLUSIONS We suggest that the predominant expression of Elovl5b in salmon liver and Elovl5a in salmon intestine is an adaptation, enabled by genome duplication, to a diet rich in terrestrial invertebrates which are relatively poor in LC-PUFA. Pike have retained an ancestral expression profile which supports the maintenance of PUFA in the brain but, due to a highly piscivorous LC-PUFA-rich diet, is not required in liver and intestine. Thus, the characterisation of elovl5 in Northern pike provides insights into the evolutionary divergence of duplicated genes, and the ecological adaptations of salmonids which have enabled colonisation of nutrient poor freshwaters. Article in Journal/Newspaper Atlantic salmon University of Stirling: Stirling Digital Research Repository BMC Evolutionary Biology 13 1 85
institution Open Polar
collection University of Stirling: Stirling Digital Research Repository
op_collection_id ftunivstirling
language English
topic Atlantic salmon
Elongase of very long-chain fatty acids
Northern pike
Paralogous genes
Whole-genome duplication
spellingShingle Atlantic salmon
Elongase of very long-chain fatty acids
Northern pike
Paralogous genes
Whole-genome duplication
Carmona-Antonanzas, Greta
Tocher, Douglas R
Taggart, John
Leaver, Michael
An evolutionary perspective on Elovl5 fatty acid elongase: comparison of Northern pike and duplicated paralogs from Atlantic salmon
topic_facet Atlantic salmon
Elongase of very long-chain fatty acids
Northern pike
Paralogous genes
Whole-genome duplication
description BACKGROUND The ability to produce physiologically critical LC-PUFA from dietary fatty acids differs greatly among teleost species, and is dependent on the possession and expression of fatty acyl desaturase and elongase genes. Atlantic salmon, as a result of a recently duplicated genome, have more of these enzymes than other fish. Recent phylogenetic studies show that Northern pike represents the closest extant relative of the preduplicated ancestral salmonid. Here we characterise a pike fatty acyl elongase, elovl5, and compare it to Atlantic salmon elovl5a and elovl5b duplicates. RESULTS Phylogenetic analyses show that Atlantic salmon paralogs are evolving symmetrically, and they have been retained in the genome by purifying selection. Heterologous expression in yeast showed that Northern pike Elovl5 activity is indistinguishable from that of the salmon paralogs, efficiently elongating C18 and C20 substrates. However, in contrast to salmon, pike elovl5 was predominantly expressed in brain with negligible expression in liver and intestine. CONCLUSIONS We suggest that the predominant expression of Elovl5b in salmon liver and Elovl5a in salmon intestine is an adaptation, enabled by genome duplication, to a diet rich in terrestrial invertebrates which are relatively poor in LC-PUFA. Pike have retained an ancestral expression profile which supports the maintenance of PUFA in the brain but, due to a highly piscivorous LC-PUFA-rich diet, is not required in liver and intestine. Thus, the characterisation of elovl5 in Northern pike provides insights into the evolutionary divergence of duplicated genes, and the ecological adaptations of salmonids which have enabled colonisation of nutrient poor freshwaters.
author2 Institute of Aquaculture
orcid:0000-0002-8603-9410
orcid:0000-0002-3843-9663
orcid:0000-0002-3155-0844
format Article in Journal/Newspaper
author Carmona-Antonanzas, Greta
Tocher, Douglas R
Taggart, John
Leaver, Michael
author_facet Carmona-Antonanzas, Greta
Tocher, Douglas R
Taggart, John
Leaver, Michael
author_sort Carmona-Antonanzas, Greta
title An evolutionary perspective on Elovl5 fatty acid elongase: comparison of Northern pike and duplicated paralogs from Atlantic salmon
title_short An evolutionary perspective on Elovl5 fatty acid elongase: comparison of Northern pike and duplicated paralogs from Atlantic salmon
title_full An evolutionary perspective on Elovl5 fatty acid elongase: comparison of Northern pike and duplicated paralogs from Atlantic salmon
title_fullStr An evolutionary perspective on Elovl5 fatty acid elongase: comparison of Northern pike and duplicated paralogs from Atlantic salmon
title_full_unstemmed An evolutionary perspective on Elovl5 fatty acid elongase: comparison of Northern pike and duplicated paralogs from Atlantic salmon
title_sort evolutionary perspective on elovl5 fatty acid elongase: comparison of northern pike and duplicated paralogs from atlantic salmon
publisher BioMed Central Ltd
publishDate 2013
url http://hdl.handle.net/1893/17869
https://doi.org/10.1186/1471-2148-13-85
http://dspace.stir.ac.uk/bitstream/1893/17869/1/An%20evolutionary%20perspective%20on%20Elovl5%20fatty%20acid%20elongase.pdf
genre Atlantic salmon
genre_facet Atlantic salmon
op_relation Carmona-Antonanzas G, Tocher DR, Taggart J & Leaver M (2013) An evolutionary perspective on Elovl5 fatty acid elongase: comparison of Northern pike and duplicated paralogs from Atlantic salmon. BMC Evolutionary Biology, 13, Art. No.: 85. https://doi.org/10.1186/1471-2148-13-85
85
http://hdl.handle.net/1893/17869
doi:10.1186/1471-2148-13-85
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WOS:000318368500001
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http://dspace.stir.ac.uk/bitstream/1893/17869/1/An%20evolutionary%20perspective%20on%20Elovl5%20fatty%20acid%20elongase.pdf
op_rights © 2013 Carmona-Antoñanzas et al.; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
http://creativecommons.org/licenses/by/4.0/
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