Community compositions of Bacteria and Archaea in the Sea of Okhotsk during summer
We investigated spatial variations of the bacterial and archaeal community composition in surface waters of the Sea of Okhotsk during summer of 2006, using denaturing gradient gel electrophoresis (DGGE). We determined phylogenetic assemblages, including Actinobacteria, Bacteroidetes, Cyanobacteria,...
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ftunivsthongkong:oai:repository.ust.hk:1783.1-40256 2023-05-15T17:52:39+02:00 Community compositions of Bacteria and Archaea in the Sea of Okhotsk during summer Jing, Hongmei Liu, Hongbin Suzuki, Koji Sohrin, Rumi Nishioka, Jun 2010 http://repository.ust.hk/ir/Record/1783.1-40256 https://doi.org/10.3354/ame01450 http://lbdiscover.ust.hk/uresolver?url_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rfr_id=info:sid/HKUST:SPI&rft.genre=article&rft.issn=0948-3055&rft.volume=61&rft.issue=2&rft.date=2010&rft.spage=191&rft.aulast=Jing&rft.aufirst=Hongmei&rft.atitle=Community+compositions+of+Bacteria+and+Archaea+in+the+Sea+of+Okhotsk+during+summer&rft.title=Aquatic+microbial+ecology http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=LinksAMR&SrcApp=PARTNER_APP&DestLinkType=FullRecord&DestApp=WOS&KeyUT=000284005000008 English eng http://repository.ust.hk/ir/Record/1783.1-40256 Aquatic microbial ecology, v. 61, (2), 2010, p. 191-204 0948-3055 https://doi.org/10.3354/ame01450 http://lbdiscover.ust.hk/uresolver?url_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rfr_id=info:sid/HKUST:SPI&rft.genre=article&rft.issn=0948-3055&rft.volume=61&rft.issue=2&rft.date=2010&rft.spage=191&rft.aulast=Jing&rft.aufirst=Hongmei&rft.atitle=Community+compositions+of+Bacteria+and+Archaea+in+the+Sea+of+Okhotsk+during+summer&rft.title=Aquatic+microbial+ecology http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=LinksAMR&SrcApp=PARTNER_APP&DestLinkType=FullRecord&DestApp=WOS&KeyUT=000284005000008 Phylogenetic diversity Bacteria Archaea Okhotsk Sea Canonical correspondence analysis CCA Redundancy analysis RDA Article 2010 ftunivsthongkong https://doi.org/10.3354/ame01450 2019-09-03T18:01:17Z We investigated spatial variations of the bacterial and archaeal community composition in surface waters of the Sea of Okhotsk during summer of 2006, using denaturing gradient gel electrophoresis (DGGE). We determined phylogenetic assemblages, including Actinobacteria, Bacteroidetes, Cyanobacteria, Alpha-and Gammaproteobacteria, and Marine Group II Euryarchaea, and successfully revealed their spatial distribution patterns. At most stations, Bacteria had higher diversity than Archaea, indicated by the relatively higher Shannon-Weaver indexes and numbers of operational taxonomic units (OTUs). Canonical correspondence analysis (CCA) and redundancy analysis (RDA) demonstrated that the community compositions of bacterial populations in the Sea of Okhotsk were closely associated with total prokaryote abundance, while the spatial distributions of bacterial phylogenetic groups were more related to both the concentration of dissolved organic nitrogen (DON) and the ratio of DON versus dissolved organic carbon concentration (DOC:DON). On the other hand, the spatial variation of the community composition of Archaea had no significant association with environmental parameters. Article in Journal/Newspaper okhotsk sea The Hong Kong University of Science and Technology: HKUST Institutional Repository Okhotsk Weaver ENVELOPE(-153.833,-153.833,-86.967,-86.967) Aquatic Microbial Ecology 61 2 191 204 |
institution |
Open Polar |
collection |
The Hong Kong University of Science and Technology: HKUST Institutional Repository |
op_collection_id |
ftunivsthongkong |
language |
English |
topic |
Phylogenetic diversity Bacteria Archaea Okhotsk Sea Canonical correspondence analysis CCA Redundancy analysis RDA |
spellingShingle |
Phylogenetic diversity Bacteria Archaea Okhotsk Sea Canonical correspondence analysis CCA Redundancy analysis RDA Jing, Hongmei Liu, Hongbin Suzuki, Koji Sohrin, Rumi Nishioka, Jun Community compositions of Bacteria and Archaea in the Sea of Okhotsk during summer |
topic_facet |
Phylogenetic diversity Bacteria Archaea Okhotsk Sea Canonical correspondence analysis CCA Redundancy analysis RDA |
description |
We investigated spatial variations of the bacterial and archaeal community composition in surface waters of the Sea of Okhotsk during summer of 2006, using denaturing gradient gel electrophoresis (DGGE). We determined phylogenetic assemblages, including Actinobacteria, Bacteroidetes, Cyanobacteria, Alpha-and Gammaproteobacteria, and Marine Group II Euryarchaea, and successfully revealed their spatial distribution patterns. At most stations, Bacteria had higher diversity than Archaea, indicated by the relatively higher Shannon-Weaver indexes and numbers of operational taxonomic units (OTUs). Canonical correspondence analysis (CCA) and redundancy analysis (RDA) demonstrated that the community compositions of bacterial populations in the Sea of Okhotsk were closely associated with total prokaryote abundance, while the spatial distributions of bacterial phylogenetic groups were more related to both the concentration of dissolved organic nitrogen (DON) and the ratio of DON versus dissolved organic carbon concentration (DOC:DON). On the other hand, the spatial variation of the community composition of Archaea had no significant association with environmental parameters. |
format |
Article in Journal/Newspaper |
author |
Jing, Hongmei Liu, Hongbin Suzuki, Koji Sohrin, Rumi Nishioka, Jun |
author_facet |
Jing, Hongmei Liu, Hongbin Suzuki, Koji Sohrin, Rumi Nishioka, Jun |
author_sort |
Jing, Hongmei |
title |
Community compositions of Bacteria and Archaea in the Sea of Okhotsk during summer |
title_short |
Community compositions of Bacteria and Archaea in the Sea of Okhotsk during summer |
title_full |
Community compositions of Bacteria and Archaea in the Sea of Okhotsk during summer |
title_fullStr |
Community compositions of Bacteria and Archaea in the Sea of Okhotsk during summer |
title_full_unstemmed |
Community compositions of Bacteria and Archaea in the Sea of Okhotsk during summer |
title_sort |
community compositions of bacteria and archaea in the sea of okhotsk during summer |
publishDate |
2010 |
url |
http://repository.ust.hk/ir/Record/1783.1-40256 https://doi.org/10.3354/ame01450 http://lbdiscover.ust.hk/uresolver?url_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rfr_id=info:sid/HKUST:SPI&rft.genre=article&rft.issn=0948-3055&rft.volume=61&rft.issue=2&rft.date=2010&rft.spage=191&rft.aulast=Jing&rft.aufirst=Hongmei&rft.atitle=Community+compositions+of+Bacteria+and+Archaea+in+the+Sea+of+Okhotsk+during+summer&rft.title=Aquatic+microbial+ecology http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=LinksAMR&SrcApp=PARTNER_APP&DestLinkType=FullRecord&DestApp=WOS&KeyUT=000284005000008 |
long_lat |
ENVELOPE(-153.833,-153.833,-86.967,-86.967) |
geographic |
Okhotsk Weaver |
geographic_facet |
Okhotsk Weaver |
genre |
okhotsk sea |
genre_facet |
okhotsk sea |
op_relation |
http://repository.ust.hk/ir/Record/1783.1-40256 Aquatic microbial ecology, v. 61, (2), 2010, p. 191-204 0948-3055 https://doi.org/10.3354/ame01450 http://lbdiscover.ust.hk/uresolver?url_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rfr_id=info:sid/HKUST:SPI&rft.genre=article&rft.issn=0948-3055&rft.volume=61&rft.issue=2&rft.date=2010&rft.spage=191&rft.aulast=Jing&rft.aufirst=Hongmei&rft.atitle=Community+compositions+of+Bacteria+and+Archaea+in+the+Sea+of+Okhotsk+during+summer&rft.title=Aquatic+microbial+ecology http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=LinksAMR&SrcApp=PARTNER_APP&DestLinkType=FullRecord&DestApp=WOS&KeyUT=000284005000008 |
op_doi |
https://doi.org/10.3354/ame01450 |
container_title |
Aquatic Microbial Ecology |
container_volume |
61 |
container_issue |
2 |
container_start_page |
191 |
op_container_end_page |
204 |
_version_ |
1766160347557789696 |