Biomarker responses in Atlantic cod (Gadus morhua) exposed to PAHs: data treatment, data interpretation and communication of results

Master's thesis in Environmental monitoring The evaluation of multivariate statistical analysis to provide a simplified output based on biomarker responses is presented in this study. Biomarker responses obtained from two separate exposures on the effects of PAH on Atlantic cod were integrated...

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Main Author: Delgado, IO Ada Karmelle
Format: Master Thesis
Language:English
Published: University of Stavanger, Norway 2016
Subjects:
Online Access:http://hdl.handle.net/11250/2410623
id ftunivstavanger:oai:uis.brage.unit.no:11250/2410623
record_format openpolar
spelling ftunivstavanger:oai:uis.brage.unit.no:11250/2410623 2023-06-11T04:10:09+02:00 Biomarker responses in Atlantic cod (Gadus morhua) exposed to PAHs: data treatment, data interpretation and communication of results Delgado, IO Ada Karmelle 2016-06-16 application/pdf http://hdl.handle.net/11250/2410623 eng eng University of Stavanger, Norway Masteroppgave/UIS-TN-IMN/2016; http://hdl.handle.net/11250/2410623 Navngivelse 3.0 Norge http://creativecommons.org/licenses/by/3.0/no/ miljøovervåking miljøteknologi biomarkers Atlantic cod polycyclic aromatic hydrocarbons (PAHs) VDP::Technology: 500::Environmental engineering: 610 Master thesis 2016 ftunivstavanger 2023-05-29T16:04:10Z Master's thesis in Environmental monitoring The evaluation of multivariate statistical analysis to provide a simplified output based on biomarker responses is presented in this study. Biomarker responses obtained from two separate exposures on the effects of PAH on Atlantic cod were integrated using Principal Component Analysis (PCA), Integrated Biomarker Responses (IBR) and Bioeffect Assessment Index (BAI). The calculation of the indices was used to distinguish the different exposure groups within and between exposure setups. First exposure was designed to differentiate the effects of two PAHs and their first metabolic products in in vivo exposed Atlantic cod, and the second exposure was to reveal the effects of crude oil depending on the length of exposure. The sensitivity of the biomarker and the effectivity of using different suites of biomarkers in determining the variation between groups were also demonstrated. According to PCA results, the groups in the first exposure setup were not clearly discriminated but were differentiated in the second exposure, where the control group is clearly separated from the exposure groups after being exposed for 7 and 30 days. IBR was able to indicate the different groups for the second exposure setup, but only gave emphasis on the naphthalene exposed (high dose) group for the first setup. PAH metabolite biomarkers were consistently dominant in exposing the different groups in both exposures as shown by IBR and IBR/n. BAI reflected the dose-response relationship between the groups in the second exposure but was not evident on the first exposure. BAI is inclined to indicate the different health condition of the individuals in the groups in each exposure. PCA and IBR were able to acquire information about the biomarkers involved in the differentiation of groups. Based on the results, the biomarker responses were reflective of the effect of PAH on the health condition of individual samples and groups using the methods in the second exposure. The indices were able to extract ... Master Thesis atlantic cod Gadus morhua University of Stavanger: UiS Brage
institution Open Polar
collection University of Stavanger: UiS Brage
op_collection_id ftunivstavanger
language English
topic miljøovervåking
miljøteknologi
biomarkers
Atlantic cod
polycyclic aromatic hydrocarbons (PAHs)
VDP::Technology: 500::Environmental engineering: 610
spellingShingle miljøovervåking
miljøteknologi
biomarkers
Atlantic cod
polycyclic aromatic hydrocarbons (PAHs)
VDP::Technology: 500::Environmental engineering: 610
Delgado, IO Ada Karmelle
Biomarker responses in Atlantic cod (Gadus morhua) exposed to PAHs: data treatment, data interpretation and communication of results
topic_facet miljøovervåking
miljøteknologi
biomarkers
Atlantic cod
polycyclic aromatic hydrocarbons (PAHs)
VDP::Technology: 500::Environmental engineering: 610
description Master's thesis in Environmental monitoring The evaluation of multivariate statistical analysis to provide a simplified output based on biomarker responses is presented in this study. Biomarker responses obtained from two separate exposures on the effects of PAH on Atlantic cod were integrated using Principal Component Analysis (PCA), Integrated Biomarker Responses (IBR) and Bioeffect Assessment Index (BAI). The calculation of the indices was used to distinguish the different exposure groups within and between exposure setups. First exposure was designed to differentiate the effects of two PAHs and their first metabolic products in in vivo exposed Atlantic cod, and the second exposure was to reveal the effects of crude oil depending on the length of exposure. The sensitivity of the biomarker and the effectivity of using different suites of biomarkers in determining the variation between groups were also demonstrated. According to PCA results, the groups in the first exposure setup were not clearly discriminated but were differentiated in the second exposure, where the control group is clearly separated from the exposure groups after being exposed for 7 and 30 days. IBR was able to indicate the different groups for the second exposure setup, but only gave emphasis on the naphthalene exposed (high dose) group for the first setup. PAH metabolite biomarkers were consistently dominant in exposing the different groups in both exposures as shown by IBR and IBR/n. BAI reflected the dose-response relationship between the groups in the second exposure but was not evident on the first exposure. BAI is inclined to indicate the different health condition of the individuals in the groups in each exposure. PCA and IBR were able to acquire information about the biomarkers involved in the differentiation of groups. Based on the results, the biomarker responses were reflective of the effect of PAH on the health condition of individual samples and groups using the methods in the second exposure. The indices were able to extract ...
format Master Thesis
author Delgado, IO Ada Karmelle
author_facet Delgado, IO Ada Karmelle
author_sort Delgado, IO Ada Karmelle
title Biomarker responses in Atlantic cod (Gadus morhua) exposed to PAHs: data treatment, data interpretation and communication of results
title_short Biomarker responses in Atlantic cod (Gadus morhua) exposed to PAHs: data treatment, data interpretation and communication of results
title_full Biomarker responses in Atlantic cod (Gadus morhua) exposed to PAHs: data treatment, data interpretation and communication of results
title_fullStr Biomarker responses in Atlantic cod (Gadus morhua) exposed to PAHs: data treatment, data interpretation and communication of results
title_full_unstemmed Biomarker responses in Atlantic cod (Gadus morhua) exposed to PAHs: data treatment, data interpretation and communication of results
title_sort biomarker responses in atlantic cod (gadus morhua) exposed to pahs: data treatment, data interpretation and communication of results
publisher University of Stavanger, Norway
publishDate 2016
url http://hdl.handle.net/11250/2410623
genre atlantic cod
Gadus morhua
genre_facet atlantic cod
Gadus morhua
op_relation Masteroppgave/UIS-TN-IMN/2016;
http://hdl.handle.net/11250/2410623
op_rights Navngivelse 3.0 Norge
http://creativecommons.org/licenses/by/3.0/no/
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