First de novo transcriptome analysis of the Antarctic springtail Cryptopygus terranovus (Collembola: Isotomidae) following mid-term heat exposure

Global human activities, such as greenhouse emissions and pollution, are promoting global warming, environmental changes and biodiversity reduction. Pristine environments such as those of Antarctica are not immune to these phenomena, as is noticeable from the increasing pace of the temperature shift...

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Published in:Antarctic Science
Main Authors: Cucini, Claudio, Leo, Chiara, Nardi, Francesco, Greco, Samuele, Manfrin, Chiara, Giulianini, Piero G., Carapelli, Antonio
Format: Article in Journal/Newspaper
Language:English
Published: 2021
Subjects:
Online Access:http://hdl.handle.net/11365/1146868
https://doi.org/10.1017/S0954102021000195
https://www.cambridge.org/core/journals/antarctic-science/article/first-de-novo-transcriptome-analysis-of-the-antarctic-springtail-cryptopygus-terranovus-collembola-isotomidae-following-midterm-heat-exposure/F3C40B9053AF443DB8BA6BDBC1F28759
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spelling ftunivsiena:oai:usiena-air.unisi.it:11365/1146868 2024-04-14T08:03:31+00:00 First de novo transcriptome analysis of the Antarctic springtail Cryptopygus terranovus (Collembola: Isotomidae) following mid-term heat exposure Cucini, Claudio Leo, Chiara Nardi, Francesco Greco, Samuele Manfrin, Chiara Giulianini, Piero G. Carapelli, Antonio Cucini, Claudio Leo, Chiara Nardi, Francesco Greco, Samuele Manfrin, Chiara Giulianini, Piero G. Carapelli, Antonio 2021 ELETTRONICO http://hdl.handle.net/11365/1146868 https://doi.org/10.1017/S0954102021000195 https://www.cambridge.org/core/journals/antarctic-science/article/first-de-novo-transcriptome-analysis-of-the-antarctic-springtail-cryptopygus-terranovus-collembola-isotomidae-following-midterm-heat-exposure/F3C40B9053AF443DB8BA6BDBC1F28759 eng eng info:eu-repo/semantics/altIdentifier/wos/WOS:000721331200004 volume:33 issue:5 firstpage:459 lastpage:468 numberofpages:10 journal:ANTARCTIC SCIENCE http://hdl.handle.net/11365/1146868 doi:10.1017/S0954102021000195 info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-85107547993 https://www.cambridge.org/core/journals/antarctic-science/article/first-de-novo-transcriptome-analysis-of-the-antarctic-springtail-cryptopygus-terranovus-collembola-isotomidae-following-midterm-heat-exposure/F3C40B9053AF443DB8BA6BDBC1F28759 info:eu-repo/semantics/openAccess gene expression RNA-Seq springtails thermal stress transcriptomics Victoria Land info:eu-repo/semantics/article 2021 ftunivsiena https://doi.org/10.1017/S0954102021000195 2024-03-21T16:11:15Z Global human activities, such as greenhouse emissions and pollution, are promoting global warming, environmental changes and biodiversity reduction. Pristine environments such as those of Antarctica are not immune to these phenomena, as is noticeable from the increasing pace of the temperature shift registered within the continent in recent decades. In this study, we describe the first de novo transcriptome analysis of the endemic Antarctic springtail (= collembolan) Cryptopygus terranovus and we evaluate its global gene expression response following a mid-term exposure of 20 days to 18°C. Expression data are compared with wild specimens sampled from their native environment to outline the molecular mechanisms triggered by the thermal exposure. Although individual plasticity in transcript modulation is assessed, several pathways appear to be differentially modulated in springtails subjected to the heat treatment vs wild specimens. Through enrichment analysis, we show that protein catabolism, fatty acid metabolism and a sexual response characterized by spermatid development are induced, while carbohydrate consumption, lipid catabolism and tissue development are downregulated in treated samples compared to controls Article in Journal/Newspaper Antarc* Antarctic Antarctic Science Antarctic Springtail Antarctica Victoria Land Springtail Università degli Studi di Siena: USiena air Antarctic The Antarctic Victoria Land Antarctic Science 1 10
institution Open Polar
collection Università degli Studi di Siena: USiena air
op_collection_id ftunivsiena
language English
topic gene expression
RNA-Seq
springtails
thermal stress
transcriptomics
Victoria Land
spellingShingle gene expression
RNA-Seq
springtails
thermal stress
transcriptomics
Victoria Land
Cucini, Claudio
Leo, Chiara
Nardi, Francesco
Greco, Samuele
Manfrin, Chiara
Giulianini, Piero G.
Carapelli, Antonio
First de novo transcriptome analysis of the Antarctic springtail Cryptopygus terranovus (Collembola: Isotomidae) following mid-term heat exposure
topic_facet gene expression
RNA-Seq
springtails
thermal stress
transcriptomics
Victoria Land
description Global human activities, such as greenhouse emissions and pollution, are promoting global warming, environmental changes and biodiversity reduction. Pristine environments such as those of Antarctica are not immune to these phenomena, as is noticeable from the increasing pace of the temperature shift registered within the continent in recent decades. In this study, we describe the first de novo transcriptome analysis of the endemic Antarctic springtail (= collembolan) Cryptopygus terranovus and we evaluate its global gene expression response following a mid-term exposure of 20 days to 18°C. Expression data are compared with wild specimens sampled from their native environment to outline the molecular mechanisms triggered by the thermal exposure. Although individual plasticity in transcript modulation is assessed, several pathways appear to be differentially modulated in springtails subjected to the heat treatment vs wild specimens. Through enrichment analysis, we show that protein catabolism, fatty acid metabolism and a sexual response characterized by spermatid development are induced, while carbohydrate consumption, lipid catabolism and tissue development are downregulated in treated samples compared to controls
author2 Cucini, Claudio
Leo, Chiara
Nardi, Francesco
Greco, Samuele
Manfrin, Chiara
Giulianini, Piero G.
Carapelli, Antonio
format Article in Journal/Newspaper
author Cucini, Claudio
Leo, Chiara
Nardi, Francesco
Greco, Samuele
Manfrin, Chiara
Giulianini, Piero G.
Carapelli, Antonio
author_facet Cucini, Claudio
Leo, Chiara
Nardi, Francesco
Greco, Samuele
Manfrin, Chiara
Giulianini, Piero G.
Carapelli, Antonio
author_sort Cucini, Claudio
title First de novo transcriptome analysis of the Antarctic springtail Cryptopygus terranovus (Collembola: Isotomidae) following mid-term heat exposure
title_short First de novo transcriptome analysis of the Antarctic springtail Cryptopygus terranovus (Collembola: Isotomidae) following mid-term heat exposure
title_full First de novo transcriptome analysis of the Antarctic springtail Cryptopygus terranovus (Collembola: Isotomidae) following mid-term heat exposure
title_fullStr First de novo transcriptome analysis of the Antarctic springtail Cryptopygus terranovus (Collembola: Isotomidae) following mid-term heat exposure
title_full_unstemmed First de novo transcriptome analysis of the Antarctic springtail Cryptopygus terranovus (Collembola: Isotomidae) following mid-term heat exposure
title_sort first de novo transcriptome analysis of the antarctic springtail cryptopygus terranovus (collembola: isotomidae) following mid-term heat exposure
publishDate 2021
url http://hdl.handle.net/11365/1146868
https://doi.org/10.1017/S0954102021000195
https://www.cambridge.org/core/journals/antarctic-science/article/first-de-novo-transcriptome-analysis-of-the-antarctic-springtail-cryptopygus-terranovus-collembola-isotomidae-following-midterm-heat-exposure/F3C40B9053AF443DB8BA6BDBC1F28759
geographic Antarctic
The Antarctic
Victoria Land
geographic_facet Antarctic
The Antarctic
Victoria Land
genre Antarc*
Antarctic
Antarctic Science
Antarctic Springtail
Antarctica
Victoria Land
Springtail
genre_facet Antarc*
Antarctic
Antarctic Science
Antarctic Springtail
Antarctica
Victoria Land
Springtail
op_relation info:eu-repo/semantics/altIdentifier/wos/WOS:000721331200004
volume:33
issue:5
firstpage:459
lastpage:468
numberofpages:10
journal:ANTARCTIC SCIENCE
http://hdl.handle.net/11365/1146868
doi:10.1017/S0954102021000195
info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-85107547993
https://www.cambridge.org/core/journals/antarctic-science/article/first-de-novo-transcriptome-analysis-of-the-antarctic-springtail-cryptopygus-terranovus-collembola-isotomidae-following-midterm-heat-exposure/F3C40B9053AF443DB8BA6BDBC1F28759
op_rights info:eu-repo/semantics/openAccess
op_doi https://doi.org/10.1017/S0954102021000195
container_title Antarctic Science
container_start_page 1
op_container_end_page 10
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