Stocking activities for the arctic charr in lake geneva: genetic effects in space and time

• Published in: Ecology and Evolution
• Main Authors: Savary, Romain, Dufresnes, Christophe, Champigneulle, Alexis, Caudron, Arnaud, Dubey, Sylvain, Perrin, Nicolas, Fumagalli, Luca
• Other Authors: Laboratoire de Biologie de la Conservation, Département d'Ecologie et Evolution, Université de Lausanne = University of Lausanne (UNIL), Centre Alpin de Recherche sur les Réseaux Trophiques et Ecosystèmes Limniques (CARRTEL), Institut National de la Recherche Agronomique (INRA)-Université Savoie Mont Blanc (USMB Université de Savoie Université de Chambéry ), Science-Management Interface for Biodiversity Conservation (SCIMABIO Interface), Hintermann and Weber, Federal Office for the Environment (FOEN), Switzerland; Inspection de la peche du Canton de Vaud, Switzerland; Ministere de l'Ecologie, de l'Energie, du Developpement Durable et de la Mer, France; Haute-Savoie Departmental Federation of Fisheries, France; La Maison de la Riviere, Tolochenaz, Switzerland
• Format: Article in Journal/Newspaper
• Language: English
• Published: HAL CCSD 2017
• Subjects: conservation-based stocking programs; fisherie management; genetic bottleneck; genetic integrity; historical DNA; Salmonid; Salvelinus; genêtic effects; storage; microsatellites; Lac Léman; arctique; effet génétique; stockage; microsatellite; salmonides; [SDE.BE]Environmental Sciences/Biodiversity and Ecology; Arctic charr; Arctique*; Salvelinus alpinus
• Online Access: https://hal.science/hal-01604393; https://hal.science/hal-01604393/document; https://hal.science/hal-01604393/file/2017_Savary_Ecol_Evol_1.pdf; https://doi.org/10.1002/ece3.3073

Artificial stocking practices are widely used by resource managers worldwide, in order to sustain fish populations exploited by both recreational and commercial activities, but their benefits are controversial. Former practices involved exotic strains, although current programs rather consider artificial breeding of local fishes (supportive breeding). Understanding the complex genetic effects of these management strategies is an important challenge with economic and conservation implications, especially in the context of population declines. In this study, we focus on the declining Arctic charr (Salvelinus alpinus) population from Lake Geneva (Switzerland and France), which has initially been restocked with allochtonous fishes in the early eighties, followed by supportive breeding. In this context, we conducted a genetic survey to document the evolution of the genetic diversity and structure throughout the last 50years, before and after the initiation of hatchery supplementation, using contemporary and historical samples. We show that the introduction of exotic fishes was associated with a genetic bottleneck in the 1980-1990s, a break of Hardy-Weinberg Equilibrium (HWE), a reduction in genetic diversity, an increase in genetic structure among spawning sites, and a change in their genetic composition. Together with better environmental conditions, three decades of subsequent supportive breeding using local fishes allowed to re-establish HWE and the initial levels of genetic variation. However, current spawning sites have not fully recovered their original genetic composition and were extensively homogenized across the lake. Our study demonstrates the drastic genetic consequences of different restocking tactics in a comprehensive spatiotemporal framework and suggests that genetic alteration by nonlocal stocking may be partly reversible through supportive breeding. We recommend that conservation-based programs consider local diversity and implement adequate protocols to limit the genetic homogenization of this ...