The Dynamic Arctic Snowpack Microbial Habitat

International audience Human-­‐induced environmental changes are affecting cold ecosystems and predicted impacts include rapid warming, increased nitrogen and pollutant deposition, yet the effect of these on microbial communities and nutrient cycling is poorly understood. Much of the research concer...

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Main Authors: Larose, Catherine, Cecillon, Sébastien, Maccario, Lorrie, Sanguino Casado, Laura, Dommergue, Aurélien, Vogel, Timothy, M.
Other Authors: Ampère (AMPERE), École Centrale de Lyon (ECL), Université de Lyon-Université de Lyon-Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Institut National des Sciences Appliquées de Lyon (INSA Lyon), Université de Lyon-Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Laboratoire de glaciologie et géophysique de l'environnement (LGGE), Observatoire des Sciences de l'Univers de Grenoble (OSUG), Université Joseph Fourier - Grenoble 1 (UJF)-Institut polytechnique de Grenoble - Grenoble Institute of Technology (Grenoble INP )-Institut national des sciences de l'Univers (INSU - CNRS)-Institut national de recherche en sciences et technologies pour l'environnement et l'agriculture (IRSTEA)-Université Savoie Mont Blanc (USMB Université de Savoie Université de Chambéry )-Centre National de la Recherche Scientifique (CNRS)-Université Joseph Fourier - Grenoble 1 (UJF)-Institut polytechnique de Grenoble - Grenoble Institute of Technology (Grenoble INP )-Institut national des sciences de l'Univers (INSU - CNRS)-Institut national de recherche en sciences et technologies pour l'environnement et l'agriculture (IRSTEA)-Université Savoie Mont Blanc (USMB Université de Savoie Université de Chambéry )-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)
Format: Conference Object
Language:English
Published: HAL CCSD 2013
Subjects:
Online Access:https://hal.science/hal-00932225
id ftunivsavoie:oai:HAL:hal-00932225v1
record_format openpolar
institution Open Polar
collection Université Savoie Mont Blanc: HAL
op_collection_id ftunivsavoie
language English
topic [SPI.NRJ]Engineering Sciences [physics]/Electric power
[SDE]Environmental Sciences
spellingShingle [SPI.NRJ]Engineering Sciences [physics]/Electric power
[SDE]Environmental Sciences
Larose, Catherine
Cecillon, Sébastien
Maccario, Lorrie
Sanguino Casado, Laura
Dommergue, Aurélien
Vogel, Timothy, M.
The Dynamic Arctic Snowpack Microbial Habitat
topic_facet [SPI.NRJ]Engineering Sciences [physics]/Electric power
[SDE]Environmental Sciences
description International audience Human-­‐induced environmental changes are affecting cold ecosystems and predicted impacts include rapid warming, increased nitrogen and pollutant deposition, yet the effect of these on microbial communities and nutrient cycling is poorly understood. Much of the research concerning Arctic microbial community structure and function stems from soil and permafrost studies, however relatively little is known about the snowpack. Seasonal snow cover extends over a third of the Earth's land surface, covering up to 47 million km2 and is also an important feature of the Arctic. Snow cover can be considered as a dynamic habitat of limited duration that acts as a medium and a mediator by transmitting and modifying interactions among microorganisms, plants, animals, nutrients, the atmosphere and soil. A growing body of evidence suggests that microbial communities play key roles in biogeochemical cycling in the snowpack, but little is known about the processes controlling their biogeographic distributions. We used metagenomic tools such as phylogenetic microarrays and high throughput sequencing to explore microbial community structure in samples collected from various Arctic snowpacks (North Pole, Greenland and Ny-­‐Alesund) at different seasons (spring, summer, winter) and compared these to publicly available data from other ecosystems to evaluate the roles of niche-­‐based processes vs spatial processes in explaining variations in community structure. The biogeography of Arctic microbial communities appears to be influenced by environmental factors, such as snow physics and chemistry relative to geographic distance. The results from this study offer insights into the mechanisms that generate and maintain diversity, such as speciation, extinction, dispersal and species interactions.
author2 Ampère (AMPERE)
École Centrale de Lyon (ECL)
Université de Lyon-Université de Lyon-Université Claude Bernard Lyon 1 (UCBL)
Université de Lyon-Institut National des Sciences Appliquées de Lyon (INSA Lyon)
Université de Lyon-Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)
Laboratoire de glaciologie et géophysique de l'environnement (LGGE)
Observatoire des Sciences de l'Univers de Grenoble (OSUG)
Université Joseph Fourier - Grenoble 1 (UJF)-Institut polytechnique de Grenoble - Grenoble Institute of Technology (Grenoble INP )-Institut national des sciences de l'Univers (INSU - CNRS)-Institut national de recherche en sciences et technologies pour l'environnement et l'agriculture (IRSTEA)-Université Savoie Mont Blanc (USMB Université de Savoie Université de Chambéry )-Centre National de la Recherche Scientifique (CNRS)-Université Joseph Fourier - Grenoble 1 (UJF)-Institut polytechnique de Grenoble - Grenoble Institute of Technology (Grenoble INP )-Institut national des sciences de l'Univers (INSU - CNRS)-Institut national de recherche en sciences et technologies pour l'environnement et l'agriculture (IRSTEA)-Université Savoie Mont Blanc (USMB Université de Savoie Université de Chambéry )-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)
format Conference Object
author Larose, Catherine
Cecillon, Sébastien
Maccario, Lorrie
Sanguino Casado, Laura
Dommergue, Aurélien
Vogel, Timothy, M.
author_facet Larose, Catherine
Cecillon, Sébastien
Maccario, Lorrie
Sanguino Casado, Laura
Dommergue, Aurélien
Vogel, Timothy, M.
author_sort Larose, Catherine
title The Dynamic Arctic Snowpack Microbial Habitat
title_short The Dynamic Arctic Snowpack Microbial Habitat
title_full The Dynamic Arctic Snowpack Microbial Habitat
title_fullStr The Dynamic Arctic Snowpack Microbial Habitat
title_full_unstemmed The Dynamic Arctic Snowpack Microbial Habitat
title_sort dynamic arctic snowpack microbial habitat
publisher HAL CCSD
publishDate 2013
url https://hal.science/hal-00932225
op_coverage Big Sky, Montana, United States
genre Arctic
Greenland
North Pole
permafrost
genre_facet Arctic
Greenland
North Pole
permafrost
op_source Program & Abstracts of the Fifth International Conference on Polar and Alpine Microbiology
PAM5
https://hal.science/hal-00932225
PAM5, Sep 2013, Big Sky, Montana, United States. pp.30
op_relation hal-00932225
https://hal.science/hal-00932225
_version_ 1797576484795187200
spelling ftunivsavoie:oai:HAL:hal-00932225v1 2024-04-28T08:07:19+00:00 The Dynamic Arctic Snowpack Microbial Habitat Larose, Catherine Cecillon, Sébastien Maccario, Lorrie Sanguino Casado, Laura Dommergue, Aurélien Vogel, Timothy, M. Ampère (AMPERE) École Centrale de Lyon (ECL) Université de Lyon-Université de Lyon-Université Claude Bernard Lyon 1 (UCBL) Université de Lyon-Institut National des Sciences Appliquées de Lyon (INSA Lyon) Université de Lyon-Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) Laboratoire de glaciologie et géophysique de l'environnement (LGGE) Observatoire des Sciences de l'Univers de Grenoble (OSUG) Université Joseph Fourier - Grenoble 1 (UJF)-Institut polytechnique de Grenoble - Grenoble Institute of Technology (Grenoble INP )-Institut national des sciences de l'Univers (INSU - CNRS)-Institut national de recherche en sciences et technologies pour l'environnement et l'agriculture (IRSTEA)-Université Savoie Mont Blanc (USMB Université de Savoie Université de Chambéry )-Centre National de la Recherche Scientifique (CNRS)-Université Joseph Fourier - Grenoble 1 (UJF)-Institut polytechnique de Grenoble - Grenoble Institute of Technology (Grenoble INP )-Institut national des sciences de l'Univers (INSU - CNRS)-Institut national de recherche en sciences et technologies pour l'environnement et l'agriculture (IRSTEA)-Université Savoie Mont Blanc (USMB Université de Savoie Université de Chambéry )-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS) Big Sky, Montana, United States 2013-09-08 https://hal.science/hal-00932225 en eng HAL CCSD hal-00932225 https://hal.science/hal-00932225 Program & Abstracts of the Fifth International Conference on Polar and Alpine Microbiology PAM5 https://hal.science/hal-00932225 PAM5, Sep 2013, Big Sky, Montana, United States. pp.30 [SPI.NRJ]Engineering Sciences [physics]/Electric power [SDE]Environmental Sciences info:eu-repo/semantics/conferenceObject Conference papers 2013 ftunivsavoie 2024-04-11T00:10:42Z International audience Human-­‐induced environmental changes are affecting cold ecosystems and predicted impacts include rapid warming, increased nitrogen and pollutant deposition, yet the effect of these on microbial communities and nutrient cycling is poorly understood. Much of the research concerning Arctic microbial community structure and function stems from soil and permafrost studies, however relatively little is known about the snowpack. Seasonal snow cover extends over a third of the Earth's land surface, covering up to 47 million km2 and is also an important feature of the Arctic. Snow cover can be considered as a dynamic habitat of limited duration that acts as a medium and a mediator by transmitting and modifying interactions among microorganisms, plants, animals, nutrients, the atmosphere and soil. A growing body of evidence suggests that microbial communities play key roles in biogeochemical cycling in the snowpack, but little is known about the processes controlling their biogeographic distributions. We used metagenomic tools such as phylogenetic microarrays and high throughput sequencing to explore microbial community structure in samples collected from various Arctic snowpacks (North Pole, Greenland and Ny-­‐Alesund) at different seasons (spring, summer, winter) and compared these to publicly available data from other ecosystems to evaluate the roles of niche-­‐based processes vs spatial processes in explaining variations in community structure. The biogeography of Arctic microbial communities appears to be influenced by environmental factors, such as snow physics and chemistry relative to geographic distance. The results from this study offer insights into the mechanisms that generate and maintain diversity, such as speciation, extinction, dispersal and species interactions. Conference Object Arctic Greenland North Pole permafrost Université Savoie Mont Blanc: HAL