Brains in Metamorphosis: Temporal Transcriptome Dynamics in Hatchery-Reared Flatfishes

Metamorphosis is a captivating process of change during which the morphology of the larva is completely reshaped to face the new challenges of adult life. In the case of fish, this process initiated in the brain has traditionally been considered to be a critical rearing point and despite the pioneer...

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Published in:Biology
Main Authors: Guerrero-Peña, Laura, Suarez-Bregua, Paula, Méndez Martínez, Luis, Tur Estrada, Ricardo, Tena, Juan A., Rotllant, Josep, Rubiolo Gaytán, Juan Andrés, García Fernández, Pablo
Other Authors: Universidade de Santiago de Compostela. Departamento de Zooloxía, Xenética e Antropoloxía Física
Format: Article in Journal/Newspaper
Language:English
Published: MDPI
Subjects:
RNA
Online Access:http://hdl.handle.net/10347/32013
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spelling ftunivsantcomp:oai:minerva.usc.es:10347/32013 2024-02-27T08:46:04+00:00 Brains in Metamorphosis: Temporal Transcriptome Dynamics in Hatchery-Reared Flatfishes Guerrero-Peña, Laura Suarez-Bregua, Paula Méndez Martínez, Luis Tur Estrada, Ricardo Tena, Juan A. Rotllant, Josep Rubiolo Gaytán, Juan Andrés García Fernández, Pablo Universidade de Santiago de Compostela. Departamento de Zooloxía, Xenética e Antropoloxía Física http://hdl.handle.net/10347/32013 eng eng MDPI https://doi.org/10.3390/biology10121256 Guerrero-Peña, L.; Suarez-Bregua, P.; Méndez-Martínez, L.; García-Fernández, P.; Tur, R.; Rubiolo, J.A.; Tena, J.J.; Rotllant, J. Brains in Metamorphosis: Temporal Transcriptome Dynamics in Hatchery-Reared Flatfishes. Biology 2021, 10, 1256. https://doi.org/10.3390/biology10121256 2079-7737 http://hdl.handle.net/10347/32013 This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license http://creativecommons.org/licenses/by/4.0/deed.es open access RNA Turbot Metamorphosis Brain Sequencing Transcriptome journal article VoR ftunivsantcomp https://doi.org/10.3390/biology10121256 2024-01-31T00:27:04Z Metamorphosis is a captivating process of change during which the morphology of the larva is completely reshaped to face the new challenges of adult life. In the case of fish, this process initiated in the brain has traditionally been considered to be a critical rearing point and despite the pioneering molecular work carried out in other flatfishes, the underlying molecular basis is still relatively poorly characterized. Turbot brain transcriptome of three developmental stages (pre-metamorphic, climax of metamorphosis and post-metamorphic) were analyzed to study the gene expression dynamics throughout the metamorphic process. A total of 1570 genes were differentially expressed in the three developmental stages and we found a specific pattern of gene expression at each stage. Unexpectedly, at the climax stage of metamorphosis, we found highly expressed genes related to the immune response, while the biological pathway enrichment analysis in pre-metamorphic and post-metamorphic were related to cell differentiation and oxygen carrier activity, respectively. In addition, our results confirm the importance of thyroid stimulating hormone, increasing its expression during metamorphosis. Based on our findings, we assume that immune system activation during the climax of metamorphosis stage could be related to processes of larval tissue inflammation, resorption and replacement, as occurs in other vertebrates. This research was funded by the MCIN/AEI/10.13039/501100011033 grant number AGL2017-89648P to JR and by “ERDF A way of making Europe”. L. Guerrero-Peña was supported by a pre-doctoral fellowship of the Spanish FPI Research Training Program funded by Spanish Economy and Competitiveness Ministry, grant number (PRE2018-085475). L. Méndez-Martínez was supported by a pre-doctoral fellowship of the Xunta de Galicia, grant number (IN606A-2020/006). SI Article in Journal/Newspaper Turbot Minerva - Repositorio institucional da Universidade de Santiago de Compostela (USC) Martínez ENVELOPE(-62.183,-62.183,-64.650,-64.650) Biology 10 12 1256
institution Open Polar
collection Minerva - Repositorio institucional da Universidade de Santiago de Compostela (USC)
op_collection_id ftunivsantcomp
language English
topic RNA
Turbot
Metamorphosis
Brain
Sequencing
Transcriptome
spellingShingle RNA
Turbot
Metamorphosis
Brain
Sequencing
Transcriptome
Guerrero-Peña, Laura
Suarez-Bregua, Paula
Méndez Martínez, Luis
Tur Estrada, Ricardo
Tena, Juan A.
Rotllant, Josep
Rubiolo Gaytán, Juan Andrés
García Fernández, Pablo
Brains in Metamorphosis: Temporal Transcriptome Dynamics in Hatchery-Reared Flatfishes
topic_facet RNA
Turbot
Metamorphosis
Brain
Sequencing
Transcriptome
description Metamorphosis is a captivating process of change during which the morphology of the larva is completely reshaped to face the new challenges of adult life. In the case of fish, this process initiated in the brain has traditionally been considered to be a critical rearing point and despite the pioneering molecular work carried out in other flatfishes, the underlying molecular basis is still relatively poorly characterized. Turbot brain transcriptome of three developmental stages (pre-metamorphic, climax of metamorphosis and post-metamorphic) were analyzed to study the gene expression dynamics throughout the metamorphic process. A total of 1570 genes were differentially expressed in the three developmental stages and we found a specific pattern of gene expression at each stage. Unexpectedly, at the climax stage of metamorphosis, we found highly expressed genes related to the immune response, while the biological pathway enrichment analysis in pre-metamorphic and post-metamorphic were related to cell differentiation and oxygen carrier activity, respectively. In addition, our results confirm the importance of thyroid stimulating hormone, increasing its expression during metamorphosis. Based on our findings, we assume that immune system activation during the climax of metamorphosis stage could be related to processes of larval tissue inflammation, resorption and replacement, as occurs in other vertebrates. This research was funded by the MCIN/AEI/10.13039/501100011033 grant number AGL2017-89648P to JR and by “ERDF A way of making Europe”. L. Guerrero-Peña was supported by a pre-doctoral fellowship of the Spanish FPI Research Training Program funded by Spanish Economy and Competitiveness Ministry, grant number (PRE2018-085475). L. Méndez-Martínez was supported by a pre-doctoral fellowship of the Xunta de Galicia, grant number (IN606A-2020/006). SI
author2 Universidade de Santiago de Compostela. Departamento de Zooloxía, Xenética e Antropoloxía Física
format Article in Journal/Newspaper
author Guerrero-Peña, Laura
Suarez-Bregua, Paula
Méndez Martínez, Luis
Tur Estrada, Ricardo
Tena, Juan A.
Rotllant, Josep
Rubiolo Gaytán, Juan Andrés
García Fernández, Pablo
author_facet Guerrero-Peña, Laura
Suarez-Bregua, Paula
Méndez Martínez, Luis
Tur Estrada, Ricardo
Tena, Juan A.
Rotllant, Josep
Rubiolo Gaytán, Juan Andrés
García Fernández, Pablo
author_sort Guerrero-Peña, Laura
title Brains in Metamorphosis: Temporal Transcriptome Dynamics in Hatchery-Reared Flatfishes
title_short Brains in Metamorphosis: Temporal Transcriptome Dynamics in Hatchery-Reared Flatfishes
title_full Brains in Metamorphosis: Temporal Transcriptome Dynamics in Hatchery-Reared Flatfishes
title_fullStr Brains in Metamorphosis: Temporal Transcriptome Dynamics in Hatchery-Reared Flatfishes
title_full_unstemmed Brains in Metamorphosis: Temporal Transcriptome Dynamics in Hatchery-Reared Flatfishes
title_sort brains in metamorphosis: temporal transcriptome dynamics in hatchery-reared flatfishes
publisher MDPI
url http://hdl.handle.net/10347/32013
long_lat ENVELOPE(-62.183,-62.183,-64.650,-64.650)
geographic Martínez
geographic_facet Martínez
genre Turbot
genre_facet Turbot
op_relation https://doi.org/10.3390/biology10121256
Guerrero-Peña, L.; Suarez-Bregua, P.; Méndez-Martínez, L.; García-Fernández, P.; Tur, R.; Rubiolo, J.A.; Tena, J.J.; Rotllant, J. Brains in Metamorphosis: Temporal Transcriptome Dynamics in Hatchery-Reared Flatfishes. Biology 2021, 10, 1256. https://doi.org/10.3390/biology10121256
2079-7737
http://hdl.handle.net/10347/32013
op_rights This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license
http://creativecommons.org/licenses/by/4.0/deed.es
open access
op_doi https://doi.org/10.3390/biology10121256
container_title Biology
container_volume 10
container_issue 12
container_start_page 1256
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