Divergence by depth in an oceanic fish

Despite the striking physical and environmental gradients associated with depth variation in the oceans, relatively little is known about their impact on population diversification, adaptation and speciation. Changes in light associated with increasing depth are likely to alter the visual environmen...

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Published in:PeerJ
Main Authors: Shum, P, Pampoulie, C, Sacchi, C, Mariani, S
Format: Article in Journal/Newspaper
Language:English
Published: Peer J 2014
Subjects:
Online Access:http://usir.salford.ac.uk/id/eprint/33293/
http://usir.salford.ac.uk/id/eprint/33293/1/peerj-525.pdf
https://doi.org/10.7717/peerj.525
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spelling ftunivsalford:oai:usir.salford.ac.uk:33293 2023-05-15T17:33:04+02:00 Divergence by depth in an oceanic fish Shum, P Pampoulie, C Sacchi, C Mariani, S 2014-08-14 application/pdf http://usir.salford.ac.uk/id/eprint/33293/ http://usir.salford.ac.uk/id/eprint/33293/1/peerj-525.pdf https://doi.org/10.7717/peerj.525 en eng Peer J http://usir.salford.ac.uk/id/eprint/33293/1/peerj-525.pdf Shum, P, Pampoulie, C, Sacchi, C and Mariani, S orcid:0000-0002-5329-0553 2014, 'Divergence by depth in an oceanic fish' , PeerJ, 2 , e525. doi:10.7717/peerj.525 cc_by http://usir.salford.ac.uk/id/eprint/33293/1/peerj-525.pdf:public CC-BY Subjects outside of the University Themes Article PeerReviewed 2014 ftunivsalford https://doi.org/10.7717/peerj.525 2022-03-01T22:08:08Z Despite the striking physical and environmental gradients associated with depth variation in the oceans, relatively little is known about their impact on population diversification, adaptation and speciation. Changes in light associated with increasing depth are likely to alter the visual environment of organisms, and adaptive changes in visual systems may be expected. The pelagic beaked redfish, Sebastes mentella, exhibits depth-associated patterns of substructure in the central North Atlantic, with a widely distributed shallow-pelagic population inhabiting waters between 250 and 550 m depth and a deep-pelagic population dwelling between 550 and 800 m. Here we performed a molecular genetic investigation of samples from fish collected from ‘shallow’ and ‘deep’ populations, using the mitochondrial control region and the gene coding for the visual-pigment rhodopsin. We identify patterns suggestive of potential adaptation to different depths, by detecting a specific amino acid replacement at the rhodopsin gene. Mitochondrial DNA results reflect a scenario of long-term demographic independence between the two S. mentella groups, and raise the possibility that these ‘stocks’ may in fact be two incipient species. Article in Journal/Newspaper North Atlantic Sebastes mentella University of Salford Institutional Repository PeerJ 2 e525
institution Open Polar
collection University of Salford Institutional Repository
op_collection_id ftunivsalford
language English
topic Subjects outside of the University Themes
spellingShingle Subjects outside of the University Themes
Shum, P
Pampoulie, C
Sacchi, C
Mariani, S
Divergence by depth in an oceanic fish
topic_facet Subjects outside of the University Themes
description Despite the striking physical and environmental gradients associated with depth variation in the oceans, relatively little is known about their impact on population diversification, adaptation and speciation. Changes in light associated with increasing depth are likely to alter the visual environment of organisms, and adaptive changes in visual systems may be expected. The pelagic beaked redfish, Sebastes mentella, exhibits depth-associated patterns of substructure in the central North Atlantic, with a widely distributed shallow-pelagic population inhabiting waters between 250 and 550 m depth and a deep-pelagic population dwelling between 550 and 800 m. Here we performed a molecular genetic investigation of samples from fish collected from ‘shallow’ and ‘deep’ populations, using the mitochondrial control region and the gene coding for the visual-pigment rhodopsin. We identify patterns suggestive of potential adaptation to different depths, by detecting a specific amino acid replacement at the rhodopsin gene. Mitochondrial DNA results reflect a scenario of long-term demographic independence between the two S. mentella groups, and raise the possibility that these ‘stocks’ may in fact be two incipient species.
format Article in Journal/Newspaper
author Shum, P
Pampoulie, C
Sacchi, C
Mariani, S
author_facet Shum, P
Pampoulie, C
Sacchi, C
Mariani, S
author_sort Shum, P
title Divergence by depth in an oceanic fish
title_short Divergence by depth in an oceanic fish
title_full Divergence by depth in an oceanic fish
title_fullStr Divergence by depth in an oceanic fish
title_full_unstemmed Divergence by depth in an oceanic fish
title_sort divergence by depth in an oceanic fish
publisher Peer J
publishDate 2014
url http://usir.salford.ac.uk/id/eprint/33293/
http://usir.salford.ac.uk/id/eprint/33293/1/peerj-525.pdf
https://doi.org/10.7717/peerj.525
genre North Atlantic
Sebastes mentella
genre_facet North Atlantic
Sebastes mentella
op_relation http://usir.salford.ac.uk/id/eprint/33293/1/peerj-525.pdf
Shum, P, Pampoulie, C, Sacchi, C and Mariani, S orcid:0000-0002-5329-0553 2014, 'Divergence by depth in an oceanic fish' , PeerJ, 2 , e525.
doi:10.7717/peerj.525
op_rights cc_by
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