A MULTI-YEAR INVESTIGATION OF THE SPECIALIZED METABOLITE COMPOSITION OF TRICHODESMIUM SPP.

The specialized metabolite composition of members of the genus Trichodesmium is understudied in comparison to what is known about its ecological role as a dominant nitrogen fixer in oligotrophic tropical and subtropical waters. The occurrence of large surface accumulations, or blooms, comprised of t...

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Main Author: Via, Christopher William
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Published: DigitalCommons@URI 2022
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Online Access:https://digitalcommons.uri.edu/oa_diss/1372
https://doi.org/10.23860/diss-via-christopher-2022
https://digitalcommons.uri.edu/context/oa_diss/article/2386/viewcontent/Via_uri_0186A_12822.pdf
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spelling ftunivrhodeislan:oai:digitalcommons.uri.edu:oa_diss-2386 2023-07-30T04:05:34+02:00 A MULTI-YEAR INVESTIGATION OF THE SPECIALIZED METABOLITE COMPOSITION OF TRICHODESMIUM SPP. Via, Christopher William 2022-01-01T08:00:00Z application/pdf https://digitalcommons.uri.edu/oa_diss/1372 https://doi.org/10.23860/diss-via-christopher-2022 https://digitalcommons.uri.edu/context/oa_diss/article/2386/viewcontent/Via_uri_0186A_12822.pdf unknown DigitalCommons@URI https://digitalcommons.uri.edu/oa_diss/1372 doi:10.23860/diss-via-christopher-2022 https://digitalcommons.uri.edu/context/oa_diss/article/2386/viewcontent/Via_uri_0186A_12822.pdf Open Access Dissertations text 2022 ftunivrhodeislan https://doi.org/10.23860/diss-via-christopher-2022 2023-07-17T19:08:15Z The specialized metabolite composition of members of the genus Trichodesmium is understudied in comparison to what is known about its ecological role as a dominant nitrogen fixer in oligotrophic tropical and subtropical waters. The occurrence of large surface accumulations, or blooms, comprised of these filamentous cyanobacteria is increasing globally and these events contain potentially toxic metabolites. Currently there is a lack of a systematic field and laboratory studies with respect to Trichodesmium spp. metabolic capacity. This study aims to determine the specialized metabolite profile of two members of the Trichodesmium genus examining cultivated specimens and environmental collections (from the Gulf of Mexico and North Atlantic Ocean) of both T. erythraeum and T. thiebautii colonies. Chapter one introduces marine natural products with an emphasis on the halogenated specialized metabolites produced by marine cyanobacteria. In chapter two I utilized bioassay- and mass spectrometry-guided isolation to characterize specialized metabolites from an environmental collection of Trichodesmium thiebautii. Identifying the unique isotopic patterns in molecules containing halogen atoms, I isolated and characterized the structure of a dichlorinated metabolite named trichothiazole A. In Chapter three, I used an untargeted metabolomics approach, namely LC-MS/MS-based molecular networking to visualize the chemical space available in Trichodesmium biomass and to guide the isolation of chlorovinylidene-containing compounds from the same Trichodesmium collection examined in Chapter two. These networks showed the large abundance of highly functionalized metabolites, and two mass spectrometry library hits included the previously characterized smenamides A and B. This led to the isolation and complete characterization of additional smenamide analogs C, D, and E. In Chapter four, I continued to utilize LC-MS/MS-based molecular networking along with other targeted and untargeted mass spectrometry approaches to compare the ... Text North Atlantic University of Rhode Island: DigitalCommons@URI
institution Open Polar
collection University of Rhode Island: DigitalCommons@URI
op_collection_id ftunivrhodeislan
language unknown
description The specialized metabolite composition of members of the genus Trichodesmium is understudied in comparison to what is known about its ecological role as a dominant nitrogen fixer in oligotrophic tropical and subtropical waters. The occurrence of large surface accumulations, or blooms, comprised of these filamentous cyanobacteria is increasing globally and these events contain potentially toxic metabolites. Currently there is a lack of a systematic field and laboratory studies with respect to Trichodesmium spp. metabolic capacity. This study aims to determine the specialized metabolite profile of two members of the Trichodesmium genus examining cultivated specimens and environmental collections (from the Gulf of Mexico and North Atlantic Ocean) of both T. erythraeum and T. thiebautii colonies. Chapter one introduces marine natural products with an emphasis on the halogenated specialized metabolites produced by marine cyanobacteria. In chapter two I utilized bioassay- and mass spectrometry-guided isolation to characterize specialized metabolites from an environmental collection of Trichodesmium thiebautii. Identifying the unique isotopic patterns in molecules containing halogen atoms, I isolated and characterized the structure of a dichlorinated metabolite named trichothiazole A. In Chapter three, I used an untargeted metabolomics approach, namely LC-MS/MS-based molecular networking to visualize the chemical space available in Trichodesmium biomass and to guide the isolation of chlorovinylidene-containing compounds from the same Trichodesmium collection examined in Chapter two. These networks showed the large abundance of highly functionalized metabolites, and two mass spectrometry library hits included the previously characterized smenamides A and B. This led to the isolation and complete characterization of additional smenamide analogs C, D, and E. In Chapter four, I continued to utilize LC-MS/MS-based molecular networking along with other targeted and untargeted mass spectrometry approaches to compare the ...
format Text
author Via, Christopher William
spellingShingle Via, Christopher William
A MULTI-YEAR INVESTIGATION OF THE SPECIALIZED METABOLITE COMPOSITION OF TRICHODESMIUM SPP.
author_facet Via, Christopher William
author_sort Via, Christopher William
title A MULTI-YEAR INVESTIGATION OF THE SPECIALIZED METABOLITE COMPOSITION OF TRICHODESMIUM SPP.
title_short A MULTI-YEAR INVESTIGATION OF THE SPECIALIZED METABOLITE COMPOSITION OF TRICHODESMIUM SPP.
title_full A MULTI-YEAR INVESTIGATION OF THE SPECIALIZED METABOLITE COMPOSITION OF TRICHODESMIUM SPP.
title_fullStr A MULTI-YEAR INVESTIGATION OF THE SPECIALIZED METABOLITE COMPOSITION OF TRICHODESMIUM SPP.
title_full_unstemmed A MULTI-YEAR INVESTIGATION OF THE SPECIALIZED METABOLITE COMPOSITION OF TRICHODESMIUM SPP.
title_sort multi-year investigation of the specialized metabolite composition of trichodesmium spp.
publisher DigitalCommons@URI
publishDate 2022
url https://digitalcommons.uri.edu/oa_diss/1372
https://doi.org/10.23860/diss-via-christopher-2022
https://digitalcommons.uri.edu/context/oa_diss/article/2386/viewcontent/Via_uri_0186A_12822.pdf
genre North Atlantic
genre_facet North Atlantic
op_source Open Access Dissertations
op_relation https://digitalcommons.uri.edu/oa_diss/1372
doi:10.23860/diss-via-christopher-2022
https://digitalcommons.uri.edu/context/oa_diss/article/2386/viewcontent/Via_uri_0186A_12822.pdf
op_doi https://doi.org/10.23860/diss-via-christopher-2022
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